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Species Resource name RRC ID Author Title Journal Published Volume Pages Pubmed ID DOI
Tropical clawed frog   Nigerian H line   31794   Kobayashi Y, Hamamoto A, Hirayama T, Saito Y.   Molecular cloning, expression, and signaling pathway of four melanin-concentrating hormone receptors from Xenopus tropicalis.   Gen. Comp. Endocrinol.   2015 -2 -1   212   114-23   24662390   10.1016/j.ygcen.2014.03.005  
DNA material, Tropical clawed frog   RDB6727 X. laevis whole embryo(stage 10.5) EST cl...   32637   Epting D, Slanchev K, Boehlke C, Hoff S, Loges NT, Yasunaga T, Indorf L, Nestel S, Lienkamp SS, Omran H, Kuehn EW, Ronneberger O, Walz G, Kramer-Zucker A.   The Rac1 regulator ELMO controls basal body migration and docking in multiciliated cells through interaction with Ezrin.   Development   2015 -1 -1   142(1)   174-84   25516973   10.1242/dev.112250  
Tropical clawed frog   Nigerian A line, Ivory Coast line   36057   Hayashi S, Kobayashi T, Yano T, Kamiyama N, Egawa S, Seki R, Takizawa K, Okabe M, Yokoyama H, Tamura K.   Evidence for an amphibian sixth digit.   Zoological Lett   2015   1   17   26605062   10.1186/s40851-015-0019-y  
Tropical clawed frog   Ivory Coast, Nigerian, Golden   34824   Igawa T, Watanabe A, Suzuki A, Kashiwagi A, Kashiwagi K, Noble A, Guille M, Simpson DE, Horb ME, Fujii T, Sumida M.   Inbreeding Ratio and Genetic Relationships among Strains of the Western Clawed Frog, Xenopus tropicalis.   PLoS ONE   2015   10(7)   e0133963   26222540   10.1371/journal.pone.0133963  
Tropical clawed frog   Nigerian H line   31792   Miyake A, Araki M.   Retinal stem/progenitor cells in the ciliary marginal zone complete retinal regeneration: a study of retinal regeneration in a novel animal model.   Dev Neurobiol   2014 -7   74(7)   739-56   24488715   10.1002/dneu.22169  
Tropical clawed frog   Nigerian H line   31791   Takeuchi T, Kubo Y, Okano K, Okano T.   Identification and characterization of cryptochrome4 in the ovary of western clawed frog Xenopus tropicalis.   Zool. Sci.   2014 -3   31(3)   152-9   24601777   10.2108/zsj.31.152  
Tropical clawed frog   Ivory Coast line   31793   Yamashita T, Ono K, Ohuchi H, Yumoto A, Gotoh H, Tomonari S, Sakai K, Fujita H, Imamoto Y, Noji S, Nakamura K, Shichida Y.   Evolution of mammalian Opn5 as a specialized UV-absorbing pigment by a single amino acid mutation.   J. Biol. Chem.   2014 -2 -14   289(7)   3991-4000   24403072   10.1074/jbc.M113.514075  
Tropical clawed frog   Ivory Coast line   31810   Araki M.   A model for retinal regeneration in Xenopus.   Xenopus Development (ed. M Kloc, J Z Kubiak)   2014          
Tropical clawed frog   Golden line   31814   Hanada H, K Kashiwagi, K Suzuki, I Tazawa, T Yamamoto, A Kashiwagi.   Minireview: Suppression of anuran metamorphosis by synthetic chemical compounds.   In Frogs: Genetic Diversity, Neural Development and Environmental influences   2014          
Tropical clawed frog   Nigerian H line   31802   Kurabayashi A, R Kakehashi, I Tazawa, Y Haramoto,T Oshima, Y Ito, M Sumida.   Improved transport of the model amphibian Xenopus tropicalis, and its viable temperature for transport.   Curr Herpetol.   2014   33   75-87      
Tropical clawed frog   Ivory Coast line   31805   Ochi H, A Kawaguchi, H Ogino.   Differential use of paralogous genes via evolution of cis-regulatory elements for divergent expression specificities.   In New Principles in Depvelopmental Processes (ed. Kondoh H, Kuroiwa A.)   2014   chapter11        
Tropical clawed frog   Ivory Coast line   31795   Yajima H, Suzuki M, Ochi H, Ikeda K, Sato S, Yamamura K, Ogino H, Ueno N, Kawakami K.   Six1 is a key regulator of the developmental and evolutionary architecture of sensory neurons in craniates.   BMC Biol.   2014   12   40   24885223   10.1186/1741-7007-12-40  
Tropical clawed frog   X. tropicalis   30831   Yasuoka Y, Suzuki Y, Takahashi S, Someya H, Sudou N, Haramoto Y, Cho KW, Asashima M, Sugano S, Taira M.   Occupancy of tissue-specific cis-regulatory modules by Otx2 and TLE/Groucho for embryonic head specification.   Nat Commun   2014   5   4322   25005894   10.1038/ncomms5322  
Tropical clawed frog   Nigerian H line   31790   Oka T, Mitsui-Watanabe N, Tatarazako N, Onishi Y, Katsu Y, Miyagawa S, Ogino Y, Yatsu R, Kohno S, Takase M, Kawashima Y, Ohta Y, Aoki Y, Guillette LJ Jr, Iguchi T.   Establishment of transactivation assay systems using fish, amphibian, reptilian and human thyroid hormone receptors.   J Appl Toxicol   2013 -9   33(9)   991-1000   23112079   10.1002/jat.2825  
Tropical clawed frog   Ivory Coast line   31785   Nakajima K, Nakai Y, Okada M, Yaoita Y.   Targeted gene disruption in the Xenopus tropicalis genome using designed TALE nucleases.   Zool. Sci.   2013 -6   30(6)   455-60   23721469   10.2108/zsj.30.455  
Tropical clawed frog   Golden line   31787   Saka M, Tada N, Kamata Y.   Application of an amphibian (Silurana tropicalis) metamorphosis assay to the testing of the chronic toxicity of three rice paddy herbicides: simetryn, mefenacet, and thiobencarb.   Ecotoxicol. Environ. Saf.   2013 -6   92   135-43   23597675   10.1016/j.ecoenv.2013.03.023  
Tropical clawed frog   Golden line   31789   Takagi C, Sakamaki K, Morita H, Hara Y, Suzuki M, Kinoshita N, Ueno N.   Transgenic Xenopus laevis for live imaging in cell and developmental biology.   Dev. Growth Differ.   2013 -5   55(4)   422-33   23480392   10.1111/dgd.12042  
Tropical clawed frog   Ivory Coast line   31786   Okada M, Tazawa I, Nakajima K, Yaoita Y.   Expression of the amelogenin gene in the skin of Xenopus tropicalis.   Zool. Sci.   2013 -3   30(3)   154-9   23480373   10.2108/zsj.30.154  
Tropical clawed frog   Ivory Coast line   31784   Nakajima K, Yaoita Y.   Comparison of TALEN scaffolds in Xenopus tropicalis.   Biol Open   2013   2(12)   1364-70   24285709   10.1242/bio.20136676  
Human and Animal Cells, Tropical clawed frog   Nigerian H line   31788   Nejigane S, Takahashi S, Haramoto Y, Michiue T, Asashima M.   Hippo signaling components, Mst1 and Mst2, act as a switch between self-renewal and differentiation in Xenopus hematopoietic and endothelial progenitors.   Int. J. Dev. Biol.   2013   57(5)   407-14   23873372   10.1387/ijdb.130010st  
Tropical clawed frog   Ivory Coast line   31779   Nakajima K, Nakajima T, Takase M, Yaoita Y.   Generation of albino Xenopus tropicalis using zinc-finger nucleases.   Dev. Growth Differ.   2012 -12   54(9)   777-84   23106502   10.1111/dgd.12006  
Tropical clawed frog   Nigerian H line   31778   Saka M, Tada N, Kamata Y.   Examination of an amphibian metamorphosis assay under an individual-separated exposure system using Silurana tropicalis tadpoles.   Ecotoxicol. Environ. Saf.   2012 -12   86   86-92   23067544   10.1016/j.ecoenv.2012.08.034  
Tropical clawed frog   Nigerian H line   31783   Saito S, Nakatsuka K, Takahashi K, Fukuta N, Imagawa T, Ohta T, Tominaga M.   Analysis of transient receptor potential ankyrin 1 (TRPA1) in frogs and lizards illuminates both nociceptive heat and chemical sensitivities and coexpression with TRP vanilloid 1 (TRPV1) in ancestral vertebrates.   J. Biol. Chem.   2012 -8 -31   287(36)   30743-54   22791718   10.1074/jbc.M112.362194  
Tropical clawed frog   Ivory Coast line   31780   Nakajima K, Fujimoto K, Yaoita Y.   Regulation of thyroid hormone sensitivity by differential expression of the thyroid hormone receptor during Xenopus metamorphosis.   Genes Cells   2012 -8   17(8)   645-59   22686326   10.1111/j.1365-2443.2012.01614.x  
Tropical clawed frog   Nigerian H line, Ivory Coast line   31781   Okada M, Nakajima K, Yaoita Y.   Translational regulation by the 5'-UTR of thyroid hormone receptor α mRNA.   J. Biochem.   2012 -5   151(5)   519-31   22406405   10.1093/jb/mvs026  
Tropical clawed frog   Ivory Coast line   31776   Sudou N, Yamamoto S, Ogino H, Taira M.   Dynamic in vivo binding of transcription factors to cis-regulatory modules of cer and gsc in the stepwise formation of the Spemann-Mangold organizer.   Development   2012 -5   139(9)   1651-61   22492356   10.1242/dev.068395  
Tropical clawed frog   Nigerian H line   31782   Sakai K, Imamoto Y, Su CY, Tsukamoto H, Yamashita T, Terakita A, Yau KW, Shichida Y.   Photochemical nature of parietopsin.   Biochemistry   2012 -3 -6   51(9)   1933-41   22303823   10.1021/bi2018283  
Tropical clawed frog   Ivory Coast line   31800   Ochi H, Tamai T, Nagano H, Kawaguchi A, Sudou N, Ogino H.   Evolution of a tissue-specific silencer underlies divergence in the expression of pax2 and pax8 paralogues.   Nat Commun   2012   3   848   22617288   10.1038/ncomms1851  
Tropical clawed frog   Nigerian H line   31777   Ogino H, Ochi H, Uchiyama C, Louie S, Grainger RM.   Comparative genomics-based identification and analysis of cis-regulatory elements.   Methods Mol. Biol.   2012   917   245-63   22956093   10.1007/978-1-61779-992-1_15  
Tropical clawed frog   X. tropicalis   12690   Sato K, Yamashita T, Ohuchi H, Shichida Y.   Vertebrate ancient-long opsin has molecular properties intermediate between those of vertebrate and invertebrate visual pigments.   Biochemistry   2011 -12 -6   50(48)   10484-90   22066464   10.1021/bi201212z  
Tropical clawed frog     11950   Saito S, Fukuta N, Shingai R, Tominaga M.   Evolution of vertebrate transient receptor potential vanilloid 3 channels: opposite temperature sensitivity between mammals and western clawed frogs.   PLoS Genet.   2011 -4   7(4)   e1002041   21490957   10.1371/journal.pgen.1002041  
Tropical clawed frog     11951   Hikosaka A, Nishimura K, Hikosaka-Katayama T, Kawahara A.   Recent transposition activity of Xenopus T2 family miniature inverted-repeat transposable elements.   Mol. Genet. Genomics   2011 -3   285(3)   219-24   21234602   10.1007/s00438-010-0599-3  
Tropical clawed frog     11952   Nejigane S, Haramoto Y, Okuno M, Takahashi S, Asashima M.   The transcriptional coactivators Yap and TAZ are expressed during early Xenopus development.   Int. J. Dev. Biol.   2011   55(1)   121-6   20979024   10.1387/ijdb.103130sn  
Tropical clawed frog     11957   Katsu Y, Taniguchi E, Urushitani H, Miyagawa S, Takase M, Kubokawa K, Tooi O, Oka T, Santo N, Myburgh J, Matsuno A, Iguchi T.   Molecular cloning and characterization of ligand- and species-specificity of amphibian estrogen receptors.   Gen. Comp. Endocrinol.   2010 -9 -1   168(2)   220-30   20064516   10.1016/j.ygcen.2010.01.002  
Tropical clawed frog     6966   Saka M.   Acute toxicity of rice paddy herbicides simetryn, mefenacet, and thiobencarb to Silurana tropicalis tadpoles.   Ecotoxicol. Environ. Saf.   2010 -9   73(6)   1165-9   20537391   10.1016/j.ecoenv.2010.05.008  
Tropical clawed frog     11953   Fukuda M, Takahashi S, Haramoto Y, Onuma Y, Kim YJ, Yeo CY, Ishiura S, Asashima M.   Zygotic VegT is required for Xenopus paraxial mesoderm formation and is regulated by Nodal signaling and Eomesodermin.   Int. J. Dev. Biol.   2010   54(1)   81-92   20013651   10.1387/ijdb.082837mf  
Tropical clawed frog     11958   Hikosaka A, Kawahara A.   A systematic search and classification of T2 family miniature inverted-repeat transposable elements (MITEs) in Xenopus tropicalis suggests the existence of recently active MITE subfamilies.   Mol. Genet. Genomics   2010 -1   283(1)   49-62   19915867   10.1007/s00438-009-0496-9  
Tropical clawed frog     11954   Kashiwagi K, Kashiwagi A, Kurabayashi A, Hanada H, Nakajima K, Okada M, Takase M, Yaoita Y.   Xenopus tropicalis: an ideal experimental animal in amphibia.   Exp. Anim.   2010   59(4)   395-405   20660986    
Tropical clawed frog     11956   Kubo Y, Takeuchi T, Okano K, Okano T.   Cryptochrome genes are highly expressed in the ovary of the African clawed frog, Xenopus tropicalis.   PLoS ONE   2010   5(2)   e9273   20174658   10.1371/journal.pone.0009273  
Tropical clawed frog     4792   Suzuki K, Takahashi S, Haramoto Y, Onuma Y, Nagamine K, Okabayashi K, Hashizume K, Iwanaka T, Asashima M.   XRASGRP2 is essential for blood vessel formation during Xenopus development.   Int. J. Dev. Biol.   2010   54(4)   609-15   19598105   10.1387/ijdb.092929ks  
Tropical clawed frog     4794   Onuma Y, Haramoto Y, Nejigane S, Takahashi S, Asashima M.   Bestrophin genes are expressed in Xenopus development.   Biochem. Biophys. Res. Commun.   2009 -7 -3   384(3)   290-5   19406105   10.1016/j.bbrc.2009.04.117  
Tropical clawed frog     4795   Oka T, Miyahara M, Yamamoto J, Mitsui N, Fujii T, Tooi O, Kashiwagi K, Takase M, Kashiwagi A, Iguchi T.   Application of metamorphosis assay to a native Japanese amphibian species, Rana rugosa, for assessing effects of thyroid system affecting chemicals.   Ecotoxicol. Environ. Saf.   2009 -7   72(5)   1400-5   19394694   10.1016/j.ecoenv.2009.03.012  
Tropical clawed frog     4791   Takada H, Kawana T, Ito Y, Kikuno RF, Mamada H, Araki T, Koga H, Asashima M, Taira M.   The RNA-binding protein Mex3b has a fine-tuning system for mRNA regulation in early Xenopus development.   Development   2009 -7   136(14)   2413-22   19542354   10.1242/dev.029165  
Tropical clawed frog     4796   Ogino H, Ochi H.   Resources and transgenesis techniques for functional genomics in Xenopus.   Dev. Growth Differ.   2009 -5   51(4)   387-401   19382936   10.1111/j.1440-169X.2009.01098.x  
Human and Animal Cells, Tropical clawed frog   293T (RCB2202)   4797   Oshiumi H, Suzuki Y, Matsumoto M, Seya T.   Regulator of complement activation (RCA) gene cluster in Xenopus tropicalis.   Immunogenetics   2009 -5   61(5)   371-84   19319518   10.1007/s00251-009-0368-9  
Tropical clawed frog     4793   Ariizumi T, Takahashi S, Chan TC, Ito Y, Michiue T, Asashima M.   Isolation and differentiation of Xenopus animal cap cells.   Curr Protoc Stem Cell Biol   2009 -4   Chapter 1   Unit 1D.5   19382122   10.1002/9780470151808.sc01d05s9  
Tropical clawed frog     4800   Miura S, Hanaoka K, Togashi S.   Skeletogenesis in Xenopus tropicalis: characteristic bone development in an anuran amphibian.   Bone   2008 -11   43(5)   901-9   18692165   10.1016/j.bone.2008.07.005  
Pathogenic microorganisms, Tropical clawed frog   ?   47040   Mochizuki T, Kawasaki M, Anzawa K, Fujita J, Ushigami T, Takeda K, Sano A, Takahashi Y, Kamei K.   Epidemiology of sporadic (non-epidemic) cases of Trichophyton tonsurans infection in Japan based on PCR-RFLP analysis of non-transcribed spacer region of ribosomal RNA gene.   Jpn. J. Infect. Dis.   2008 -5   61(3)   219-22   18503175    
Tropical clawed frog     4799   Date-Ito A, Ohara H, Ichikawa M, Mori Y, Hagino-Yamagishi K.   Xenopus V1R vomeronasal receptor family is expressed in the main olfactory system.   Chem. Senses   2008 -4   33(4)   339-46   18238827   10.1093/chemse/bjm090  
Tropical clawed frog     4801   Kawasaki A, Kumasaka M, Satoh A, Suzuki M, Tamura K, Goto T, Asashima M, Yamamoto H.   Mitf contributes to melanosome distribution and melanophore dendricity.   Pigment Cell Melanoma Res   2008 -2   21(1)   56-62   18353143   10.1111/j.1755-148X.2007.00420.x  
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