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Species Resource name RRC ID Author Title Journal Published Volume Pages Pubmed ID DOI
Medaka   Fosmid (GOLWFno481_e16), OK-Cab (MT830), kazura^j...   47730   Seleit A, Krämer I, Ambrosio E, Dross N, Engel U, Centanin L.   Sequential organogenesis sets two parallel sensory lines in medaka.   Development   2017 -2 -15   144(4)   687-697   28087632   10.1242/dev.142752  
Medaka   ci (MT15), Tg(Actb-SLa:GFP) (TG1147), LWS^-1a-...   47705   Homma N, Harada Y, Uchikawa T, Kamei Y, Fukamachi S.   Protanopia (red color-blindness) in medaka: a simple system for producing color-blind fish and testing their spectral sensitivity.   BMC Genet.   2017 -2 -06   18(1)   10   28166717   10.1186/s12863-017-0477-7  
Medaka   hatching enzyme, d-rR/TOKYO (MT837)   47704   Nakano M, Arai Y, Kotera I, Okabe K, Kamei Y, Nagai T.   Genetically encoded ratiometric fluorescent thermometer with wide range and rapid response.   PLoS ONE   2017   12(2)   e0172344   28212432   10.1371/journal.pone.0172344  
Medaka   naruto^j113-2B (MT402), OK-Cab (MT830)   47681   Sasado T, Kondoh H, Furutani-Seiki M, Naruse K.   Mutation in cpsf6/CFIm68 (Cleavage and Polyadenylation Specificity Factor Subunit 6) causes short 3'UTRs and disturbs gene expression in developing embryos, as revealed by an analysis of primordial germ cell migration using the medaka mutant naruto.   PLoS ONE   2017   12(3)   e0172467   28253363   10.1371/journal.pone.0172467  
Medaka   MR(del2) (MT1050), HdrR-II1 (IB178)   47437   Sakamoto T, Yoshiki M, Takahashi H, Yoshida M, Ogino Y, Ikeuchi T, Nakamachi T, Konno N, Matsuda K, Sakamoto H.   Principal function of mineralocorticoid signaling suggested by constitutive knockout of the mineralocorticoid receptor in medaka fish.   Sci Rep   2016 -11 -29   6   37991   27897263   10.1038/srep37991  
Medaka   HdrR-II1 (IB178), d-rR/TOKYO (MT837), HNI-II (IB176...   47243   Horie Y, Myosho T, Sato T, Sakaizumi M, Hamaguchi S, Kobayashi T.   Androgen induces gonadal soma-derived factor, Gsdf, in XX gonads correlated to sex-reversal but not Dmrt1 directly, in the teleost fish, northern medaka (Oryzias sakaizumii).   Mol. Cell. Endocrinol.   2016 -11 -15   436   141-9   27452797   10.1016/j.mce.2016.07.022  
Medaka   HdrR-II1 (IB176)   45522   Nagashima H, Sugahara F, Watanabe K, Shibata M, Chiba A, Sato N.   Developmental origin of the clavicle, and its implications for the evolution of the neck and the paired appendages in vertebrates.   J. Anat.   2016 -10   229(4)   536-48   27279028   10.1111/joa.12502  
Medaka   HdrR-II1(IB178)   39516   Kowalska A, Siwicki AK, Kowalski RK.   Dietary resveratrol improves immunity but reduces reproduction of broodstock medaka Oryzias latipes (Temminck & Schlegel).   Fish Physiol. Biochem.   2016 -7 -18       27431678   10.1007/s10695-016-0265-8  
Medaka   HNI-II (IB176), OK-Cab (MT830), ci (MT15), Hd...   36999   Utagawa U, Higashi S, Kamei Y, Fukamachi S.   Characterization of assortative mating in medaka: Mate discrimination cues and factors that bias sexual preference.   Horm Behav   2016 -5 -31       27260680   10.1016/j.yhbeh.2016.05.022  
Medaka   OK-Cab (MT830), Database   36405   Takeyama K, Chatani M, Inohaya K, Kudo A.   TGFβ-2 signaling is essential for osteoblast migration and differentiation during fracture healing in medaka fish.   Bone   2016 -5   86   68-78   26947892   10.1016/j.bone.2016.03.001  
Medaka   d-rR-Tg(β-actin-lox-p-DsRed2) (TG131), d-rR/TOK...   36426   Yokota S, Matsuno R, Kato H, Hashimoto H, Kinoshita M, Yokoi H, Suzuki T.   Establishment of oct4:egfp transgenic and oct4:egfp /β-actin:DsRed double transgenic medaka lines.   In Vitro Cell. Dev. Biol. Anim.   2016 -4 -11       27067442   10.1007/s11626-016-0020-6  
Medaka     36394   Takehana Y, Sakai M, Narita T, Sato T, Naruse K, Sakaizumi M.   Origin of Boundary Populations in Medaka (Oryzias latipes Species Complex).   Zool. Sci.   2016 -4   33(2)   125-31   27032677   10.2108/zs150144  
Medaka   ci-Tg(Actb-GH:GFP) (TG958)   35979   Komine R, Nishimaki T, Kimura T, Oota H, Naruse K, Homma N, Fukamachi S.   Transgenic medaka that overexpress growth hormone have a skin color that does not indicate the activation or inhibition of somatolactin-α signal.   Gene   2016 -3 -3       26945627   10.1016/j.gene.2016.02.046  
Medaka   Qurt (MT828), T5 (MT827), Fosmid clone (GOLWFn...   36051   Kagawa N, Honda A, Zenno A, Omoto R, Imanaka S, Takehana Y, Naruse K.   Arginine vasotocin neuronal development and its projection in the adult brain of the medaka.   Neurosci. Lett.   2016 -2 -2   613   47-53   26739197   10.1016/j.neulet.2015.12.049  
Medaka   HdrR-II1 (IB178)   36395   Zhang X, Guan G, Li M, Zhu F, Liu Q, Naruse K, Herpin A, Nagahama Y, Li J, Hong Y.   Autosomal gsdf acts as a male sex initiator in the fish medaka.   Sci Rep   2016 -1 -27   6   19738   26813267   10.1038/srep19738  
Medaka   olvas-eGFP   36423   Chakraborty T, Zhou LY, Chaudhari A, Iguchi T, Nagahama Y.   Dmy initiates masculinity by altering Gsdf/Sox9a2/Rspo1 expression in medaka (Oryzias latipes).   Sci Rep   2016 -1 -25   6   19480   26806354   10.1038/srep19480  
Medaka     36424   Zhou L, Charkraborty T, Zhou Q, Mohapatra S, Nagahama Y, Zhang Y.   Rspo1-activated signalling molecules are sufficient to induce ovarian differentiation in XY medaka (Oryzias latipes).   Sci Rep   2016 -1 -19   6   19543   26782368   10.1038/srep19543  
Medaka   OK-Cab (MT830), Database   36402   Mantoku A, Chatani M, Aono K, Inohaya K, Kudo A.   Osteoblast and osteoclast behaviors in the turnover of attachment bones during medaka tooth replacement.   Dev. Biol.   2016 -1 -15   409(2)   370-81   26658319   10.1016/j.ydbio.2015.12.002  
Medaka   p53(-/-) mutant   36427   Tu TY, Hong CY, Sasado T, Kashiwada S, Chen PJ.   Early life exposure to a rodent carcinogen propiconazole fungicide induces oxidative stress and hepatocarcinogenesis in medaka fish.   Aquat. Toxicol.   2016 -1   170   52-61   26619215   10.1016/j.aquatox.2015.11.014  
Medaka   olsp48d24 olsp35n14, olsp62a16, olec36d21,olec36g...   36417   Kikuta A, Furukawa E, Ogawa R, Suganuma N, Saitoh M, Nishimaki T, Katsumura T, Oota H, Kawamoto T, Tatsukawa H, Hashimoto H, Hitomi K.   Biochemical Characterization of Medaka (Oryzias latipes) Transglutaminases, OlTGK1 and OlTGK2, as Orthologues of Human Keratinocyte-Type Transglutaminase.   PLoS ONE   2015 -12 -29   10(12)   e0144194   26713442   10.1371/journal.pone.0144194  
Medaka   Gsdf(del19) (MT1104), HdrR-II1 (IB178), Hd-rR.C...   39517   Imai T, Saino K, Matsuda M.   Mutation of Gonadal soma-derived factor induces medaka XY gonads to undergo ovarian development.   Biochem. Biophys. Res. Commun.   2015 -11 -6   467(1)   109-14   26408909   10.1016/j.bbrc.2015.09.112  
Medaka   Hd-rRII1(IB178), Hd-rR.Cab-dmrt1^C53R (IB1024)   36425   Imai T, Saino K, Matsuda M.   Mutation of Gonadal soma-derived factor induces medaka XY gonads to undergo ovarian development.   Biochem. Biophys. Res. Commun.   2015 -11 -6   467(1)   109-14   26408909   10.1016/j.bbrc.2015.09.112  
Medaka   cDNA, d-rR/TOKYO (MT837)   35675   Kikuchi Y, Hosono K, Yamashita J, Kawabata Y, Okubo K.   Glucocorticoid receptor exhibits sexually dimorphic expression in the medaka brain.   Gen. Comp. Endocrinol.   2015 -11 -1   223   47-53   26433060   10.1016/j.ygcen.2015.09.031  
Medaka   Medaka strain FLFII and d-rR.YHNI (cross between th...   36295   Pfennig F, Standke A, Gutzeit HO.   The role of Amh signaling in teleost fish--Multiple functions not restricted to the gonads.   Gen. Comp. Endocrinol.   2015 -11 -1   223   87-107   26428616   10.1016/j.ygcen.2015.09.025  
Medaka   Qurt (MT828), hi-medaka (MT835)   35677   Ogino Y, Kuraku S, Ishibashi H, Miyakawa H, Sumiya E, Miyagawa S, Matsubara H, Yamada G, Baker ME, Iguchi T.   Neofunctionalization of Androgen Receptor by Gain-of-Function Mutations in Teleost Fish Lineage.   Mol. Biol. Evol.   2015 -10 -27       26507457   10.1093/molbev/msv218  
Medaka   O. celebensis (Ujung pandang) (RS278), Oryzias ma...   47242   Myosho T, Takehana Y, Hamaguchi S, Sakaizumi M.   Turnover of Sex Chromosomes in Celebensis Group Medaka Fishes.   G3 (Bethesda)   2015 -10 -23   5(12)   2685-91   26497145   10.1534/g3.115.021543  
Medaka   BAC clones   36511   Amaury Herpin, Eva Englberger, Mario Zehner, Robin Wacker, Manfred Gessler, Manfred Schartl   Defective autophagy through epg5 mutation results in failure to reduce germ plasm and mitochondria   The FASEB Journal   2015 -10   29 (10)   4145-4161     10.1096/fj.14-265462  
Medaka   OK-Cab (MT830), Database   36401   Chatani M, Mantoku A, Takeyama K, Abduweli D, Sugamori Y, Aoki K, Ohya K, Suzuki H, Uchida S, Sakimura T, Kono Y, Tanigaki F, Shirakawa M, Takano Y, Kudo A.   Microgravity promotes osteoclast activity in medaka fish reared at the international space station.   Sci Rep   2015 -9   5   14172   26387549   10.1038/srep14172  
Medaka   HNI, HSOK (IB183), O. luzonensis (RS270), O. ce...   34793   Maruyama K, Wang B, Ishikawa Y, Yasumasu S, Iuchi I.   Evolutionary pathway of pseudogenization of globin genes, α5 and β5, in genus Oryzias.   Dev. Genes Evol.   2015 -9   225(5)   305-11   26199047   10.1007/s00427-015-0509-0  
Medaka   clones   36430   Hosono K, Kikuchi Y, Miyanishi H, Hiraki-Kajiyama T, Takeuchi A, Nakasone K, Maehiro S, Okubo K.   Teleocortin: A Novel Member of the CRH Family in Teleost Fish.   Endocrinology   2015 -8   156(8)   2949-57   26030477   10.1210/en.2015-1042  
Medaka   Cab-Tg(FoxD3-GFP)2 (TG1068), Cab inbred strain, H...   35470   Ishikawa Y, Inohaya K, Yamamoto N, Maruyama K, Yoshimoto M, Iigo M, Oishi T, Kudo A, Ito H.   The Parapineal Is Incorporated into the Habenula during Ontogenesis in the Medaka Fish.   Brain Behav. Evol.   2015 -8   85(4)   257-70   26184391   10.1159/000431249  
Medaka   cDNAs, BAC, and fosmids clones   34543   Nishimura T, Sato T, Yamamoto Y, Watakabe I, Ohkawa Y, Suyama M, Kobayashi S, Tanaka M.   Sex determination. foxl3 is a germ cell-intrinsic factor involved in sperm-egg fate decision in medaka.   Science   2015 -7 -17   349(6245)   328-31   26067255   10.1126/science.aaa2657  
Medaka   FLFII STII d-rR.YHNI   36277   Froschauer A, Kube L, Kegler A, Rieger C, Gutzeit HO.   Tunable Protein Stabilization In Vivo Mediated by Shield-1 in Transgenic Medaka.   PLoS ONE   2015 -7 -6   10(7)   e0131252   26148066   10.1371/journal.pone.0131252  
Medaka   d-rR, Hd-rR, HNI, Kaga   36331   Horie Y, Kobayashi T.   Gonadotrophic cells and gonadal sex differentiation in medaka: Characterization of several northern and southern strains.   J Exp Zool A Ecol Genet Physiol   2015 -7   323(6)   392-7   25866156   10.1002/jez.1932  
Medaka   HdrR-II1 (IB178)   33524   Yuasa HJ, Mizuno K, Ball HJ.   Low efficiency IDO2 enzymes are conserved in lower vertebrates, whereas higher efficiency IDO1 enzymes are dispensable.   FEBS J.   2015 -7   282(14)   2735-45   25950090   10.1111/febs.13316  
Medaka   GaudiRSG (TG1055), GaudiBBW2.1 (TG1056)   36679   Reinhardt R, Centanin L, Tavhelidse T, Inoue D, Wittbrodt B, Concordet JP, Martinez-Morales JR, Wittbrodt J.   Sox2, Tlx, Gli3, and Her9 converge on Rx2 to define retinal stem cells in vivo.   EMBO J.   2015 -6 -3   34(11)   1572-88   25908840   10.15252/embj.201490706  
Medaka   O.curvunotus   36398   Hideki Hayakawa, Quang Dung Le, Masato Kinoshita, Yusuke Takehana, Kei Sakuma, Hirohiko Takeshima, Shigeaki Kojima, Kiyoshi Naruse, Koji Inoue   Genetic similarity of the Hainan medaka populations collected from hyper-and hypo-osmotic environments in northern Vietnam   Ocean Science Journal   2015 -6 -1   50(2)   231-235      
Medaka   database   36422   MAMUN, M., SATO, S., YOSHIYAMA, K., TSUCHIDA, K., IWASAWA, A., HIRAMATSU, K., & NISHIMURA, S   Genetic Diversity of Medaka (Oryzias latipes) in Paddy Field Water Channels   農業農村工学会論文集,   2015 -6   83(3)   99-106     http://doi.org/10.11408/jsidre.83.I_99  
Medaka   Hd-rR   36433   Ng GH, Xu H, Pi N, Kelly BC, Gong Z.   Differential GFP expression patterns induced by different heavy metals in Tg(hsp70:gfp) transgenic medaka (Oryzias latipes).   Mar. Biotechnol.   2015 -6   17(3)   317-27   25652692   10.1007/s10126-015-9620-5  
Medaka   MT374(hirame), MT364(fukuwarai), MT830(OK-Cab...   32791   Porazinski S, Wang H, Asaoka Y, Behrndt M, Miyamoto T, Morita H, Hata S, Sasaki T, Krens SF, Osada Y, Asaka S, Momoi A, Linton S, Miesfeld JB, Link BA, Senga T, Castillo-Morales A, Urrutia AO, Shimizu N, Nagase H, Matsuura S, Bagby S, Kondoh H, Nishina H, Heisenberg CP, Furutani-Seiki M.   YAP is essential for tissue tension to ensure vertebrate 3D body shape.   Nature   2015 -5 -14   521(7551)   217-21   25778702   10.1038/nature14215  
Medaka   MT331(kyoho)   32724   Taimatsu K, Takubo K, Maruyama K, Suda T, Kudo A.   Proliferation following tetraploidization regulates the size and number of erythrocytes in the blood flow during medaka development, as revealed by the abnormal karyotype of erythrocytes in the medaka TFDP1 mutant.   Dev. Dyn.   2015 -5   244(5)   651-68   25648602   10.1002/dvdy.24259  
Medaka   resource databaase   36052   Kirchmaier S, Naruse K, Wittbrodt J, Loosli F.   The genomic and genetic toolbox of the teleost medaka (Oryzias latipes).   Genetics   2015 -4   199(4)   905-18   25855651   10.1534/genetics.114.173849  
Medaka   TILLING_MUTANT, Kyoto-Cab (OK-Cab(MT830))   33327   Uemura N, Koike M, Ansai S, Kinoshita M, Ishikawa-Fujiwara T, Matsui H, Naruse K, Sakamoto N, Uchiyama Y, Todo T, Takeda S, Yamakado H, Takahashi R.   Viable neuronopathic Gaucher disease model in Medaka (Oryzias latipes) displays axonal accumulation of alpha-synuclein.   PLoS Genet.   2015 -4   11(4)   e1005065   25835295   10.1371/journal.pgen.1005065  
Medaka   MT169(aA90)   32723   Yamamoto T, Tsukahara T, Ishiguro T, Hagiwara H, Taira M, Takeda H.   The medaka dhc2 mutant reveals conserved and distinct mechanisms of Hedgehog signaling in teleosts.   BMC Dev. Biol.   2015 -2 -3   15   9   25645819   10.1186/s12861-015-0057-x  
Medaka   T5 (MT827)   35110   Gladys FM, Matsuda M, Lim Y, Jackin BJ, Imai T, Otani Y, Yatagai T, Cense B.   Developmental and morphological studies in Japanese medaka with ultra-high resolution optical coherence tomography.   Biomed Opt Express   2015 -2 -1   6(2)   297-308   25780725   10.1364/BOE.6.000297  
Medaka   Qurt   36429   Mohapatra S, Chakraborty T, Miyagawa S, Zhou L, Ohta K, Iguchi T, Nagahama Y.   Steroid responsive regulation of IFNγ2 alternative splicing and its possible role in germ cell proliferation in medaka.   Mol. Cell. Endocrinol.   2015 -1 -15   400   61-70   25458697   10.1016/j.mce.2014.10.012  
Medaka   ha (MT65)   32743   Motoki Hojo, Ai Omi, Gen Hamanaka, Kazutoshi Shindo, Atsuko Shimada, Mariko Kondo, Takanori Narita. Masato Kiyomoto, Yohei Katsuyama, Yasuo Ohnishi, Naoki Irie and Hiroyuki Takeda   Unexpected link between polyketide synthase and calcium carbonate biomineralization   Zoological Letters   2015 -01 -13   1:3       10.1186/s40851-014-0001-0  
Medaka   HdrR-II1(IB178)   30922   Guan G, Zhang X, Naruse K, Nagahama Y, Hong Y.   Gene replacement by zinc finger nucleases in medaka embryos.   Mar. Biotechnol.   2014 -12   16(6)   739-47   25097139   10.1007/s10126-014-9587-7  
Medaka   Golwb097K23   35700   Hasebe M, Kanda S, Shimada H, Akazome Y, Abe H, Oka Y.   Kiss1 neurons drastically change their firing activity in accordance with the reproductive state: insights from a seasonal breeder.   Endocrinology   2014 -12   155(12)   4868-80   25247469   10.1210/en.2014-1472  
Medaka   HNI-I (IB176), HNI-II (IB177), Hd-rR-II1 (IB178...   35369   Tsuboko S, Kimura T, Shinya M, Suehiro Y, Okuyama T, Shimada A, Takeda H, Naruse K, Kubo T, Takeuchi H.   Genetic control of startle behavior in medaka fish.   PLoS ONE   2014 -11 -13   9(11)   e112527   25393539   10.1371/journal.pone.0112527  
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