RRC ID 40942
著者 Xiao N, Liu Y, Gu Z, Liu X, Jiao N, Liu H, Zhou Y, Shen L.
タイトル Sphingobacterium yamdrokense sp. nov., isolated from Lake Yamdrok.
ジャーナル Antonie Van Leeuwenhoek
Abstract A strictly aerobic and facultatively psychrophilic bacterium, strain 3-0-1(T), was isolated from Lake Yamdrok on the Tibetan Plateau, China. Cells were Gram-negative and short-rod-shaped. Strain 3-0-1(T) formed circular, opaque, yellow colonies, and grew at 0-5% (w/v) NaCl, pH 5.0-11.0 and 5-35 °C. Phylogenetic analysis based on 16S rRNA gene sequences of various species with validly published names showed that strain 3-0-1(T) belongs to the genus Sphingobacterium, family Sphingobacteriaceae, sharing the highest similarity with Sphingobacterim nematocida M-SX103(T) (96.62%) and less than 95% similarity with all the other species in the genus Sphingobactrium. The predominant isoprenoid quinone of strain 3-0-1(T) was identified as menaquinone 7 (MK-7), the major polar lipid was identified as phosphatidylethanolamine and the DNA G+C content was determined to be 42.5 mol%. The predominant cellular fatty acids were identified as summed feature 3 (C(16:1) ω7c and/or C(16:1) ω6c) (>30%), iso-C(15:0) (>20%) and iso-C(17:0) 3-OH (>10%). Based on the variability of phylogenetic and phenotypic characteristics, strain 3-0-1(T) represents a novel species of the genus Sphingobacterium, for which the name Sphingobacterium yamdrokense sp. nov. is proposed. The type strain is 3-0-1(T) (=JCM 19397(T) = CGMCC 1.12560(T)).
巻・号 107(5)
ページ 1331-6
公開日 2015-5-1
DOI 10.1007/s10482-015-0428-0
PMID 25795442
MeSH Base Composition DNA, Bacterial / genetics Fatty Acids / chemistry Fatty Acids / metabolism Hydrogen-Ion Concentration Lakes / chemistry Lakes / microbiology* Molecular Sequence Data Phylogeny RNA, Ribosomal, 16S / genetics Sodium Chloride / analysis Sodium Chloride / metabolism Sphingobacterium / classification* Sphingobacterium / genetics Sphingobacterium / isolation & purification* Sphingobacterium / metabolism Tibet
IF 2.674
引用数 4
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 19397 JCM 1277