RRC ID 56973
著者 Zhang J, Blessing D, Wu C, Liu N, Li J, Qin S, Li M.
タイトル Comparative transcriptomes analysis of the wing disc between two silkworm strains with different size of wings.
ジャーナル PLoS One
Abstract Wings of Bombyx mori (B. mori) develop from the primordium, and different B. mori strains have different wing types. In order to identify the key factors influencing B. mori wing development, we chose strains P50 and U11, which are typical for normal wing and minute wing phenotypes, respectively. We dissected the wing disc on the 1st-day of wandering stage (P50D1 and U11D1), 2nd-day of wandering stage (P50D2 and U11D2), and 3rd-day of wandering stage (P50D3 and U11D3). Subsequently, RNA-sequencing (RNA-Seq) was performed on both strains in order to construct their gene expression profiles. P50 exhibited 628 genes differentially expressed to U11, 324 up-regulated genes, and 304 down-regulated genes. Five enriched gene ontology (GO) terms were identified by GO enrichment analysis based on these differentially expressed genes (DEGs). KEGG enrichment analysis results showed that the DEGs were enriched in five pathways; of these, we identified three pathways related to the development of wings. The three pathways include amino sugar and nucleotide sugar metabolism pathway, proteasome signaling pathway, and the Hippo signaling pathway. The representative genes in the enrichment pathways were further verified by quantitative real-time reverse transcription polymerase chain reaction (qRT-PCR). The RNA-Seq and qRT-PCR results were largely consistent with each other. Our results also revealed that the significantly different genes obtained in our study might be involved in the development of the size of B. mori wings. In addition, several KEGG enriched pathways might be involved in the regulation of the pathways of wing formation. These results provide a basis for further research of wing development in B. mori.
巻・号 12(6)
ページ e0179560
公開日 2017-6-15
DOI 10.1371/journal.pone.0179560
PII PONE-D-17-02361
PMID 28617839
PMC PMC5472328
MeSH Animals Bombyx / embryology* Gene Expression Regulation, Developmental / physiology* Imaginal Discs / embryology* Species Specificity Transcriptome / physiology* Wings, Animal / embryology*
IF 2.776
リソース情報
カイコ p50 u11