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Species Resource name Author Title Journal Year published Volume Pages Pubmed ID
Drosophila    Abe M, Setoguchi Y, Tanaka T, Awano W, Takahashi K, Ueda R, Nakamura A, Goto S.  Membrane protein location-dependent regulation by PI3K (III) and rabenosyn-5 in Drosophila wing cells.  PLoS One.  2009  4(10)  e7306  19798413  
Drosophila    Ahmad ST, Sweeney ST, Lee JA, Sweeney NT, Gao FB.  Genetic screen identifies serpin5 as a regulator of the toll pathway and CHMP2B toxicity associated with frontotemporal dementia.  Proc Natl Acad Sci U S A.  2009  106(29)  12168-73  19581577  
General Microbes  JCM15390  Alain K, Callac N, Guégan M, Lesongeur F, Crassous P, Cambon-Bonavita MA, Querellou J, Prieur D.  Nautilia abyssi sp. nov., a thermophilic, chemolithoautotrophic, sulfur-reducing bacterium isolated from an East Pacific Rise hydrothermal vent.  Int. J. Syst. Evol. Microbiol.  2009  59(Pt 6)  1310-5  19502307  
Drosophila    Almudi I, Stocker H, Hafen E, Corominas M, Serras F.  SOCS36E specifically interferes with Sevenless signaling during Drosophila eye development.  Dev Biol.  2009  326(1)  212-23  19083999  
General Microbes  JCM15720  Amoozegar MA, Sánchez-Porro C, Rohban R, Hajighasemi M, Ventosa A.  Bacillus persepolensis sp. nov., a moderately halophilic bacterium from a hypersaline lake.  Int. J. Syst. Evol. Microbiol.  2009  59(Pt 9)  2352-8  19620367  
E.coli    Ando, T., Itakura, S., Uchii, K., Sobue, R. and Maeda, S.  Horizontal transfer of non-conjugative plasmid in colony biofilm of Escherichia coli on food-based media.  World J. Microbiol. Biotechnol.  2009  25(10)  1865-1869   
General Microbes  JCM14933  Anil Kumar P, Srinivas TN, Takaichi S, Maoka T, Sasikala Ch, Ramana ChV.  Phaeospirillum chandramohanii sp. nov., a phototrophic alphaproteobacterium with carotenoid glycosides.  Int. J. Syst. Evol. Microbiol.  2009  59(Pt 8)  2089-93  19605708  
General Microbes  JCM14780  Anil Kumar P, Srinivas TN, Thiel V, Tank M, Sasikala Ch, Ramana ChV, Imhoff JF.  Thiohalocapsa marina sp. nov., from an Indian marine aquaculture pond.  Int. J. Syst. Evol. Microbiol.  2009  59(Pt 9)  2333-8  19620368  
Yeast  BY25440 (RA...  Ano A, Suehiro D, Cha-Aim K, Aritomi K, Phonimdaeng P, Nontaso N, Hoshida H, Mizunuma M, Miyakawa T, Akada R.  Combinatorial gene overexpression and recessive mutant gene introduction in sake yeast.  Biosci Biotechnol Biochem.  2009  73(3)  633-40  19270382  
Arabidopsis  pdp  Anterola A, Göbel C, Hornung E, Sellhorn G, Feussner I, Grimes H.  Physcomitrella patens has lipoxygenases for both eicosanoid and octadecanoid pathways.  Phytochemistry.  2009  70(1)  40-52  19131081  
Arabidopsis  pdp  Anterola A, Shanle E, Mansouri K, Schuette S, Renzaglia K.  Gibberellin precursor is involved in spore germination in the moss Physcomitrella patens.  Planta.  2009  229(4)  1003-7  19112579  
Medaka  NA  Anzai D, Tonoyama Y, Ikeda A, Kawasaki T, Oka S.  Regulated expression of the HNK-1 carbohydrate is essential for medaka (Oryzias latipes) embryogenesis.  Glycobiology.  2009  19(8)  868-78  19389918  
Mouse    Araki K, Takeda N, Yoshiki A, Obata Y, Nakagata N, Shiroishi T, Moriwaki K, Yamamura K.  Establishment of germline-competent embryonic stem cell lines from the MSM/Ms strain.  Mamm Genome.  2009  20(1)  14-20  19082856  
Rat    Arao Y, Hakamata Y, Igarashi Y, Sato Y, Kayama F, Takahashi M, Kobayashi E, Murakami T.  Characterization of hepatic sexual dimorphism in Alb-DsRed2 transgenic rats.  Biochem Biophys Res Commun.  2009  382(1)  46-50  19250923  
Xenopus    Ariizumi T, Takahashi S, Chan TC, Ito Y, Michiue T, Asashima M.  Isolation and differentiation of Xenopus animal cap cells.  Curr Protoc Stem Cell Biol.  2009  Chapter 1()  Unit 1D.5  19382122  
E.coli    Arnold T, Zeth K, Linke D.  Structure and function of colicin S4, a colicin with a duplicated receptor-binding domain.  J Biol Chem.  2009  284(10)  6403-13  19056731  
Drosophila    Arsham AM, Neufeld TP.  A genetic screen in Drosophila reveals novel cytoprotective functions of the autophagy-lysosome pathway.  PLoS One.  2009  4(6)  e6068  19562034  
General Microbes  JCM15069  Arun AB, Chen WM, Lai WA, Chou JH, Shen FT, Rekha PD, Young CC.  Lutaonella thermophila gen. nov., sp. nov., a moderately thermophilic member of the family Flavobacteriaceae isolated from a coastal hot spring.  Int. J. Syst. Evol. Microbiol.  2009  59(Pt 8)  2069-73  19605713  
General Microbes  JCM1254, JC...  Ashida H, Miyake A, Kiyohara M, Wada J, Yoshida E, Kumagai H, Katayama T, Yamamoto K.  Two distinct alpha-L-fucosidases from Bifidobacterium bifidum are essential for the utilization of fucosylated milk oligosaccharides and glycoconjugates.  Glycobiology  2009  19(9)  1010-7  19520709  
General Microbes  JCM14370  Asker D, Awad TS, Beppu T, Ueda K.  Deinococcus aquiradiocola sp. nov., isolated from a radioactive site in Japan.  Int. J. Syst. Evol. Microbiol.  2009  59(Pt 1)  144-9  19126739  
General Microbes  JCM3782   Atsuko Uzura , Fumiki Nomoto, Akiko Sakoda, Yukifumi Nishimoto, Michihiko Kataoka and Sakayu Shimizu  Stereoselective synthesis of (R)-3-quinuclidinol through asymmetric reduction of 3-quinuclidinone with 3-quinuclidinone reductase of Rhodotorula rubra  Appl. Microbiol. Biotechnol.  2009  83  617-626   
Yeast    Auesukaree C, Damnernsawad A, Kruatrachue M, Pokethitiyook P, Boonchird C, Kaneko Y, Harashima S.  Genome-wide identification of genes involved in tolerance to various environmental stresses in Saccharomyces cerevisiae.  J Appl Genet.  2009  50(3)  301-310  19638689  
General Microbes  JCM14813  Azuma R, Murakami S, Ogawa A, Okada Y, Miyazaki S, Makino T.  Arcanobacterium abortisuis sp. nov., isolated from a placenta of a sow following an abortion.  Int. J. Syst. Evol. Microbiol.  2009  59(Pt 6)  1469-73  19502337  
General Microbes  JCM16419  BC Kim, KH Lee, MN Kim, EM Kim, MS Rhee, OY Kwon, and KS Shin  Paenibacillus pinihumi sp. nov., a cellulolytic bacterium isolated from the rhizosphere of Pinus densiflora  J.Microbiol.  2009  47  530-535   
Mouse    Bae SH, Woo HA, Sung SH, Lee HE, Lee SK, Kil IS, Rhee SG.  Induction of sulfiredoxin via an Nrf2-dependent pathway and hyperoxidation of peroxiredoxin III in the lungs of mice exposed to hyperoxia.  Antioxid Redox Signal.  2009  11(5)  937-948  19086807  
Zebrafish    Bae YK, Kani S, Shimizu T, Tanabe K, Nojima H, Kimura Y, Higashijima S, Hibi M.  Anatomy of zebrafish cerebellum and screen for mutations affecting its development.  Dev Biol.  2009  330(2)  406-26  19371731  
Arabidopsis  pda   Barbezier N, Canino G, Rodor J, Jobet E, Saez-Vasquez J, Marchfelder A, Echeverría M.  Processing of a dicistronic tRNA-snoRNA precursor: combined analysis in vitro and in vivo reveals alternate pathways and coupling to assembly of snoRNP.  Plant Physiol.  2009  150(3)  1598-610  19420328  
Zebrafish    Baxendale S, Chen CK, Tang H, Davison C, Hateren LV, Croning MD, Humphray SJ, Hubbard SJ, Ingham PW.  Expression screening and annotation of a zebrafish myoblast cDNA library.  Gene Expr Patterns.  2009  9(2)  73-82  19007914  
Arabidopsis  pst   Beaudoin F, Wu X, Li F, Haslam RP, Markham JE, Zheng H, Napier JA, Kunst L.  Functional characterization of the Arabidopsis beta-ketoacyl-coenzyme A reductase candidates of the fatty acid elongase.  Plant Physiol.  2009  150(3)  1174-91  19439572  
E.coli    Bekker M, de Vries S, Ter Beek A, Hellingwerf KJ, de Mattos MJ.  Respiration of Escherichia coli can be fully uncoupled via the nonelectrogenic terminal cytochrome bd-II oxidase.  J Bacteriol.  2009  191(17)  5510-7  19542282  
General Microbes  JCM15076  Ben Ali Gam Z, Oueslati R, Abdelkafi S, Casalot L, Tholozan JL, Labat M.  Desulfovibrio tunisiensis sp. nov., a novel weakly halotolerant, sulfate-reducing bacterium isolated from exhaust water of a Tunisian oil refinery.  Int. J. Syst. Evol. Microbiol.  2009  59(Pt 5)  1059-63  19406793  
Mouse    Benson SA, Ernst JD.  TLR2-dependent inhibition of macrophage responses to IFN-gamma is mediated by distinct, gene-specific mechanisms.  PLoS One.  2009  4(7)  e6329  19629181  
E.coli    Bi H, Sun L, Fukamachi T, Saito H, Kobayashi H.  HU participates in expression of a specific set of genes required for growth and survival at acidic pH in Escherichia coli.  Curr Microbiol.  2009  58(5)  443-8  19127382  
Information  C.elegans  Bialas NJ, Inglis PN, Li C, Robinson JF, Parker JD, Healey MP, Davis EE, Inglis CD, Toivonen T, Cottell DC, Blacque OE, Quarmby LM, Katsanis N, Leroux MR.  Functional interactions between the ciliopathy-associated Meckel syndrome 1 (MKS1) protein and two novel MKS1-related (MKSR) proteins.  J Cell Sci.  2009  122(Pt 5)  611-24  19208769  
Lotus / Glycine  Super Root  Bo Jian, Wensheng Hou, Cunxiang Wu, Bin Liu, Wei Liu, Shikui Song, Yurong Bi and Tianfu Han  Agrobacterium rhizogenes-mediated transformation of Superroot-derived Lotus corniculatus plants: a valuable tool for functional genomics  BMC Plant Biology  2009  9-78     
Drosophila    Bossuyt W, De Geest N, Aerts S, Leenaerts I, Marynen P, Hassan BA.  The atonal proneural transcription factor links differentiation and tumor formation in Drosophila.  PLoS Biol.  2009  7(2)  e40  19243220  
C.elegans  tm2691  Bounoutas A, Zheng Q, Nonet ML, Chalfie M.  mec-15 Encodes an F-box Protein Required for Touch Receptor Neuron Mechanosensation, Synapse Formation, and Development.  Genetics.  2009  ()    19652181  
Arabidopsis  pdp   Brownfield L, Hafidh S, Durbarry A, Khatab H, Sidorova A, Doerner P, Twell D.  Arabidopsis DUO POLLEN3 is a key regulator of male germline development and embryogenesis.  Plant Cell.  2009  21(7)  1940-56  19638475  
Algae  NIES-476  Buchmann K, Becker B.  The system of contractile vacuoles in the green alga Mesostigma viride (Streptophyta).  Protist.  2009  160(3)  427-43  19356977  
Arabidopsis  pda   Budhiraja R, Hermkes R, Müller S, Schmidt J, Colby T, Panigrahi K, Coupland G, Bachmair A.  Substrates related to chromatin and to RNA-dependent processes are modified by Arabidopsis SUMO isoforms that differ in a conserved residue with influence on desumoylation.  Plant Physiol.  2009  149(3)  1529-40  19151129  
General Microbes  JCM14822  Cai S, Dong X.  Cellulosilyticum ruminicola gen. nov., sp. nov., isolated from yak rumen contents, and reclassification of Clostridium lentocellum as Cellulosilyticum lentocellum comb. nov.  Int. J. Syst. Evol. Microbiol.  2009      19661493  
Arabidopsis  pda   Canino G, Bocian E, Barbezier N, Echeverría M, Forner J, Binder S, Marchfelder A.  Arabidopsis encodes four tRNase Z enzymes.  Plant Physiol.  2009  150(3)  1494-502  19411372  
General Microbes  JCM13067, J...  Cao YR, Jiang Y, Xu LH, Jiang CL.  Sphaerisporangium flaviroseum sp. nov. and Sphaerisporangium album sp. nov., isolated from forest soil in China.  Int. J. Syst. Evol. Microbiol.  2009  59(Pt 7)  1679-84  19542141  
Zebrafish    Carreira-Barbosa F, Kajita M, Morel V, Wada H, Okamoto H, Martinez Arias A, Fujita Y, Wilson SW, Tada M.  Flamingo regulates epiboly and convergence/extension movements through cell cohesive and signalling functions during zebrafish gastrulation.  Development.  2009  136(3)  383-92  19091770  
General Microbes  JCM15510  Castañeda-Carrión IN, Sheik CS, Krumholz LR.  Desulfovibrio africanus subsp. uniflagellum subsp. nov., a sulfate-reducing bacterium from a uranium-contaminated subsurface aquifer.  Int. J. Syst. Evol. Microbiol.  2009      19661495  
General Microbes  JCM15095, J...  Chamroensaksri N, Tanasupawat S, Akaracharanya A, Visessanguan W, Kudo T, Itoh T.  Salinivibrio siamensis sp. nov., from fermented fish (pla-ra) in Thailand.  Int. J. Syst. Evol. Microbiol.  2009  59(Pt 4)  880-5  19329624  
General Microbes  JCM7516, JC...  Chang B, Sugiyama K, Taguri T, Amemura-Maekawa J, Kura F, Watanabe H.  Specific detection of viable Legionella cells by combined use of photoactivated ethidium monoazide and PCR/real-time PCR.  Appl. Environ. Microbiol.  2009  75(1)  147-53  18978073  
General Microbes  JCM14892  Chang CF, Lee CF, Liu SM.  Candida neustonensis sp. nov., a novel ascomycetous yeast isolated from the sea surface microlayer in Taiwan.  Antonie Van Leeuwenhoek  2009  97  35-40  19823938  
Drosophila    Chang YY, Neufeld TP.  An Atg1/Atg13 complex with multiple roles in TOR-mediated autophagy regulation.  Mol Biol Cell.  2009  20(7)  2004-14  19225150  
Barley  EST Clones  Chen G, Komatsuda T, Pourkheirandish M, Sameri M, Sato K, Krugman T, Fahima T, Korol A B, Nevo E.  Mapping of the eibi1 gene responsible for the drought hypersensitive cuticle in wild barley (Hordeum spontaneum) .  Breed. Sci.  2009  59  21-26   
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