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Species Resource name Author Title Journal Year published Volume Pages Pubmed ID
Arabidopsis  pda00615,pd...  Ahn YO, Shimizu B, Sakata K, Gantulga D, Zhou C, Bevan DR, Esen A.  Scopolin-hydrolyzing beta-glucosidases in roots of Arabidopsis.  Plant Cell Physiol.  2010  51(1)  132-43  19965874  
Arabidopsis  sja05800  Kato M, Nagasaki-Takeuchi N, Ide Y, Maeshima M.  An Arabidopsis hydrophilic Ca2(+) -binding protein with a PEVK-rich domain, PCaP2, is associated with the plasma membrane and interacts with calmodulin and phosphatidylinositol phosphates.  Plant Cell Physiol.  2010  51(3)  366-79  20061304  
Information  Rice-Oryzab...  Mochida K, Shinozaki K.  Genomics and bioinformatics resources for crop improvement.  Plant Cell Physiol.  2010  51(4)  497-523  20208064  
Arabidopsis  rpc00008  Nishizawa-Yokoi A, Tainaka H, Yoshida E, Tamoi M, Yabuta Y, Shigeoka S.  The 26S proteasome function and Hsp90 activity involved in the regulation of HsfA2 expression in response to oxidative stress.  Plant Cell Physiol.  2010  51(3)  486-96  20147301  
Information  LegumeBase  Kuromori T, Takahashi S, Kondou Y, Shinozaki K, Matsui M.  Phenome analysis in plant species using loss-of-function and gain-of-function mutants.  Plant Cell Physiol.  2009  50(7)  1215-31  19502383  
Chrysanthemum  Chrysanthem...  Kusaba M, Maoka T, Morita R, Takaichi S.  A novel carotenoid derivative, lutein 3-acetate, accumulates in senescent leaves of rice.  Plant Cell Physiol.  2009  50(8)  1573-7  19561331  
Information  Rice-Oryzab...  Mano S, Miwa T, Nishikawa S, Mimura T, Nishimura M.  Seeing is believing: on the use of image databases for visually exploring plant organelle dynamics.  Plant Cell Physiol.  2009  50(12)  2000-14  19755394  
Information  nbrp  Shinozaki K, Sakakibara H.  Omics and bioinformatics: an essential toolbox for systems analyses of plant functions beyond 2010.  Plant Cell Physiol.  2009  50(7)  1177-80  19596708  
Arabidopsis  rpc00008  Takashi Y, Kobayashi Y, Tanaka K, Tamura K.  Arabidopsis replication protein A 70a is required for DNA damage response and telomere length homeostasis.  Plant Cell Physiol.  2009  50(11)  1965-76  19812063  
Arabidopsis  pst  Yuan L, Graff L, Loqué D, Kojima S, Tsuchiya YN, Takahashi H, von Wirén N.  AtAMT1;4, a pollen-specific high-affinity ammonium transporter of the plasma membrane in Arabidopsis.  Plant Cell Physiol.  2009  50(1)  13-25  19073648  
Tomato    Akihiro T, Koike S, Tani R, Tominaga T, Watanabe S, Iijima Y, Aoki K, Shibata D, Ashihara H, Matsukura C, Akama K, Fujimura T, Ezura H.  Biochemical mechanism on GABA accumulation during fruit development in tomato.  Plant Cell Physiol.  2008  49(9)  1378-89  18713763  
Tomato    Akihiro T, Koike S, Tani R, Tominaga T, Watanabe S, Iijima Y, Aoki K, Shibata D, Ashihara H, Matsukura C, Akama K, Fujimura T, Ezura H.  Biochemical mechanism on GABA accumulation during fruit development in tomato.  Plant Cell Physiol.  2008  49(9)  1378-89  18713763  
Arabidopsis  pda  Hayashi S, Ishii T, Matsunaga T, Tominaga R, Kuromori T, Wada T, Shinozaki K, Hirayama T.  The glycerophosphoryl diester phosphodiesterase-like proteins SHV3 and its homologs play important roles in cell wall organization.  Plant Cell Physiol.  2008  49(10)  1522-35  18718934  
Arabidopsis  pda  Kamada-Nobusada T, Hayashi M, Fukazawa M, Sakakibara H, Nishimura M.  A putative peroxisomal polyamine oxidase, AtPAO4, is involved in polyamine catabolism in Arabidopsis thaliana.  Plant Cell Physiol.  2008  49(9)  1272-82  18703589  
Morning Glory    Kitazawa D, Miyazawa Y, Fujii N, Hoshino A, Iida S, Nitasaka E, Takahashi H.  The gravity-regulated growth of axillary buds is mediated by a mechanism different from decapitation-induced release.  Plant Cell Physiol.  2008  49(6)  891-900  18420594  
Arabidopsis  pda  Masuda S, Mizusawa K, Narisawa T, Tozawa Y, Ohta H, Takamiya K.  The bacterial stringent response, conserved in chloroplasts, controls plant fertilization.  Plant Cell Physiol.  2008  49(2)  135-41  18178586  
Lotus / Glycine  Gifu　B-129  Mishima E, Hosokawa A, Imaizumi-Anraku H, Saito K, Kawaguchi M, Saeki K.  Requirement for Mesorhizobium loti ornithine transcarbamoylase for successful symbiosis with Lotus japonicus as revealed by an unexpected long-range genome deletion.  Plant Cell Physiol.  2008  49(3)  301-13  18184692  
Arabidopsis  pda  Nishikawa M, Hosokawa K, Ishiguro M, Minamioka H, Tamura K, Hara-Nishimura I, Takahashi Y, Shimazaki K, Imai H.  Degradation of sphingoid long-chain base 1-phosphates (LCB-1Ps): functional characterization and expression of AtDPL1 encoding LCB-1P lyase involved in the dehydration stress response in Arabidopsis.  Plant Cell Physiol.  2008  49(11)  1758-63  18849574  
Arabidopsis  rpc00008   Ogawa Y, Dansako T, Yano K, Sakurai N, Suzuki H, Aoki K, Noji M, Saito K, Shibata D.  Efficient and high-throughput vector construction and Agrobacterium-mediated transformation of Arabidopsis thaliana suspension-cultured cells for functional genomics.  Plant Cell Physiol.  2008  49(2)  242-50  18178967  
Arabidopsis  rpc00035   Shoji T, Hashimoto T.  Why does anatabine, but not nicotine, accumulate in jasmonate-elicited cultured tobacco BY-2 cells?  Plant Cell Physiol.  2008  49(8)  1209-16  18567891  
Wheat    Zhu Y, Saraike T, Yamamoto Y, Hagita H, Takumi S, Murai K.  orf260cra, a novel mitochondrial gene, is associated with the homeotic transformation of stamens into pistil-like structures (pistillody) in alloplasmic wheat.  Plant Cell Physiol.  2008  49(11)  1723-33  18794174  
Barley  EST clones  Furukawa J, Yamaji N, Wang H, Mitani N, Murata Y, Sato K, Katsuhara M, Takeda K, Ma JF.  An aluminum-activated citrate transporter in barley.  Plant Cell Physiol.  2007  48(8)  1081-91  17634181  
Arabidopsis  pda  Karakasis K, Taylor D, Ko K.  Uncovering a link between a plastid translocon component and rhomboid proteases using yeast mitochondria-based assays.  Plant Cell Physiol.  2007  48(4)  655-61  17327256  
Arabidopsis  pst  Mao P, Duan M, Wei C, Li Y.  WRKY62 transcription factor acts downstream of cytosolic NPR1 and negatively regulates jasmonate-responsive gene expression.  Plant Cell Physiol.  2007  48(6)  833-42  17510065  
Algae    Nagao M, Uemura M.  Isolation of sucrose phosphate and glutamate decarboxylase genes of a green alga Klebsormidium flaccidum associated with cold acclimation.  Plant Cell Physiol.  2007  48  S237 (Supplement)   
Arabidopsis  pdy  Ono Y, Sakai A, Takechi K, Takio S, Takusagawa M, Takano H.  NtPolI-like1 and NtPolI-like2, bacterial DNA polymerase I homologs isolated from BY-2 cultured tobacco cells, encode DNA polymerases engaged in DNA replication in both plastids and mitochondria.  Plant Cell Physiol.  2007  48(12)  1679-92  17942449  
Arabidopsis  pda  Ukitsu H, Kuromori T, Toyooka K, Goto Y, Matsuoka K, Sakuradani E, Shimizu S, Kamiya A, Imura Y, Yuguchi M, Wada T, Hirayama T, Shinozaki K.  Cytological and biochemical analysis of COF1, an Arabidopsis mutant of an ABC transporter gene.  Plant Cell Physiol.  2007  48(11)  1524-33  17971336  
Arabidopsis  pst  Yamauchi Y, Takeda-Kamiya N, Hanada A, Ogawa M, Kuwahara A, Seo M, Kamiya Y, Yamaguchi S.  Contribution of gibberellin deactivation by AtGA2ox2 to the suppression of germination of dark-imbibed Arabidopsis thaliana seeds.  Plant Cell Physiol.  2007  48(3)  555-61  17289793  
Arabidopsis  rpc00008  Desaki Y, Miya A, Venkatesh B, Tsuyumu S, Yamane H, Kaku H, Minami E, Shibuya N.  Bacterial lipopolysaccharides induce defense responses associated with programmed cell death in rice cells.  Plant Cell Physiol.  2006  47(11)  1530-40  17018557  
Algae  NIES-2235  Kajikawa M, Yamato KT, Kohzu Y, Shoji S, Matsui K, Tanaka Y, Sakai Y, Fukuzawa H.  A front-end desaturase from Chlamydomonas reinhardtii produces pinolenic and coniferonic acids by omega13 desaturation in methylotrophic yeast and tobacco.  Plant Cell Physiol.  2006  47(1)  64-73  16267098  
Morning Glory    Morita Y, Saitoh M, Hoshino A, Nitasaka E, Iida S.  Isolation of cDNAs for R2R3-MYB, bHLH, and WDR Transcriptional Regulators and Identification of c and ca Mutations Conferring White Flowers in the Japanese Morning Glory.  Plant Cell Physiol.  2006  47(4)  457-70  16446312  
Arabidopsis  pda  Munoz FJ, Baroja-Fernandez E, Moran-Zorzano MT, Alonso-Casajus N, Pozueta-Romero J.  Cloning, expression and characterization of a Nudix hydrolase that catalyzes the hydrolytic breakdown of ADP-glucose linked to starch biosynthesis in Arabidopsis thaliana.  Plant Cell Physiol.  2006  47(7)  926-34  16774931  
Algae    Nagao M, Uemura M.  Cold acclimation of green alga (Charophyceae) Klebsormidium flaccidum phylogenetically related to land plants: freezing tolerance, cell structure and compatible solute composition.  Plant Cell Physiol.  2006  47  S223(Supplement)   
Morning Glory    Cho KH, Shindo T, Kim G. T. Nitasaka E., Tsukaya H.  Characterization of a member of the AN subfamily, IAN, from Ipomoea nil.  Plant Cell Physiol.  2005  46(1)  250-255  15659438  
Arabidopsis  pda  Fukamatsu Y, Mitsui S, Yasuhara M, Tokioka Y, Ihara N, Fujita S, Kiyosue T.  Identification of LOV KELCH PROTEIN2 (LKP2)-interacting factors that can recruit LKP2 to nuclear bodies.  Plant Cell Physiol.  2005  46(8)  1340-9.  15937324  
Arabidopsis  rpc00008   Imai H, Nishiura H.  Phosphorylation of sphingoid long-chain bases in Arabidopsis: functional characterization and expression of the first sphingoid long-chain base Kinase gene in plants.  Plant Cell Physiol.  2005  46(2)  375-80  15695468  
Information  Rice  Itoh J, Nonomura K, Ikeda K, Yamaki S, Inukai Y, Yamagishi H, Kitano H, Nagato Y.  Rice plant development: from zygote to spikelet.  Plant Cell Physiol.  2005  46  23-47  15659435  
Information  Rice  Kurata N, Miyoshi K, Nonomura K, Yamazaki Y, Ito Y.  Rice mutants and genes related to organ development, morphogenesis and physiological traits.  Plant Cell Physiol.  2005  46  48-62  15659430  
Rice  O. glaberri...  Kurata, N., Miyoshi, K., Nonomura, K., Yamazaki, Y., Ito, Y.  Rice mutants and genes related to organ development, morphogenesis and physiological traits.  Plant Cell Physiol.  2005  46  48-62  15659430  
Morning Glory    Ohnishi M, Fukada-Tanaka S, Hoshino A, Takada J, Inagaki Y, Iida S.  Characterization of a novel Na+/H+ antiporter gene InNHX2 and comparison of InNHX2 with InNHX1, which is responsible for blue flower coloration by increasing the vacuolar pH in the Japanese morning glory.  Plant Cell Physiol.  2005  46(2)  259-67  15695437  
Lotus / Glycine  L:MG20  Shimoda Y, Nagata M, Suzuki A, Abe M, Sato S, Kato T, Tabata S, Higashi S, Uchiumi T.  Symbiotic rhizobium and nitric oxide induce gene expression of non-symbiotic hemoglobin in Lotus japonicus.  Plant Cell Physiol.  2005  46(1)  99-107  15668209  
Arabidopsis  rpc00001  Sirikantaramas S, Taura F, Tanaka Y, Ishikawa Y, Morimoto S, Shoyama Y.  Tetrahydrocannabinolic acid synthase, the enzyme controlling marijuana psychoactivity, is secreted into the storage cavity of the glandular trichomes.  Plant Cell Physiol.  2005  46(9)  1578-82.  16024552  
Algae    Tsuchikane Y, Fujii T, Ito M, Sekimoto H.  A sex pheromone, protoplast release-inducing protein (PR-IP) inducer, induces sexual cell division and production of PR-IP in Closterium.  Plant Cell Physiol.  2005  46(9)  1472-6  15970600  
Information  Rice  Yamazaki, Y. and Jaiswal, P.  Biological ontologies in rice databases. An introduction to the activities in Gramene and Oryzabase.  Plant Cell Physiol.  2005  46  63-68  15659431  
Information  Rice  Jiang S, Ramachandran S.  Identification and Molecular Characterization of Myosin Gene Family in Oryza sativa Genome.  Plant Cell Physiol.  2004  45  590-599  15169941  
Morning Glory    Kawasaki S., Nitasaka E.  Characterization of Tpn1 family in the Japanese morning glory: En/Spm-related transposable elements capturing host genes.  Plant Cell Physiol.  2004  45(7)  933-944  15295077  
Arabidopsis  pdp  Mitsuda N, Hisabori T, Takeyasu K, Sato MH.  VOZ; isolation and characterization of novel vascular plant transcription factors with a one-zinc finger from Arabidopsis thaliana.  Plant Cell Physiol.  2004  45(7)  845-54.  15295067  
Algae    Obata, T., Araie, H. & Shiraiwa, Y.  Bioconcentration mechanism of selenium by a coccolithophorid, Emiliania huxleyi.  Plant Cell Physiol.  2004  45  1434-1441  15564527  
Morning Glory    Oguchi T., Sage-Ono K., Kamada H., Ono M.  Characterization of transcriptional oscillation of an Arabidopsis homolog of PnC401 related to photoperiodic induction of flowering in Pharbitis nil.  Plant Cell Physiol.  2004  45(2)  232-235  14988494  
Algae    Akatsuka, S., Sekimoto, H., Iwai, H., Fukumoto, R. & Fujii, T.  Mucilage secretion regulated by sex pheromones in Closterium peracerosum-strigosum-littorale complex.  Plant Cell Physiol.  2003  44  1081-1087  14581633  
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