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Species Resource name Author Title Journal Year published Volume Pages Pubmed ID
Algae    Fujisawa T, Narikawa R, Okamoto S, Ehira S, Yoshimura H, Suzuki I, Masuda T, Mochimaru M, Takaichi S, Awai K, Sekine M, Horikawa H, Yashiro I, Omata S, Takarada H, Katano Y, Kosugi H, Tanikawa S, Ohmori K, Sato N, Ikeuchi M, Fujita N, Ohmori M.  Genomic structure of an economically important cyanobacterium, Arthrospira (Spirulina) platensis NIES-39.  DNA Res.  2010  17(2)  85-103  20203057  
Algae  NIES-2455, ...  Hayama, M., Nakada, T., Hamaji, T. & Nozaki, H.  Morphology, molecular phylogeny and taxonomy of Gonium maiaprilis sp. nov. (Goniaceae, Chlorophyta) from Japan.  Phycologia  2010  49     
Algae  NIES-464  Nozaki, H., Nakada, T., Watanabe, S.  Evolutionary origin of Gloeomonas (Volvocales, Chlorophyceae), based on ultrastructure of chloroplasts and molecular phylogeny.  J. Phycol.  2010  46(1)  195-200   
Algae  NIES-39  Tanioka Y, Miyamoto E, Yabuta Y, Ohnishi K, Fujita T, Yamaji R, Misono H, Shigeoka S, Nakano Y, Inui H, Watanabe F.  Methyladeninylcobamide functions as the cofactor of methionine synthase in a Cyanobacterium, Spirulina platensis NIES-39.  FEBS Lett.  2010  584(14)  3223-6  20558164  
Algae    Ueda, H., Otsuka, S., Senoo, K.  Bacterial Communities Constructed in Artificial Consortia of Bacteria and Chlorella vulgaris  Microbes and Environments  2010  25(1)  36-40   
Algae    Baek, SH, Hong, SS, Song, SY, Lee, HO, Nakano, SI, Han, MS.  Grazing Effects on Toxic and Non-Toxic Microcystis aeruginosa by the Mixotrophic Flagellate Ochromonas sp.  J. Freshw. Ecol.  2009  24(3)  367-373   
Algae  NIES-2434～2...  Bass D, Howe AT, Mylnikov AP, Vickerman K, Chao EE, Edwards Smallbone J, Snell J, Cabral C Jr, Cavalier-Smith T.  Phylogeny and classification of Cercomonadida (Protozoa, Cercozoa): Cercomonas, Eocercomonas, Paracercomonas, and Cavernomonas gen. nov.  Protist.  2009  160(4)  483-521  19589724  
Algae  NIES-476  Buchmann K, Becker B.  The system of contractile vacuoles in the green alga Mesostigma viride (Streptophyta).  Protist.  2009  160(3)  427-43  19356977  
Algae    Cocquyt E, Verbruggen H, Leliaert F, Zechman FW, Sabbe K, De Clerck O.  Gain and loss of elongation factor genes in green algae.  BMC Evol Biol..  2009  9()  39  19216746  
Algae  NIES-102  Ha JH, Hidaka T, Tsuno H.  Quantification of toxic Microcystis and evaluation of its dominance ratio in blooms using real-time PCR.  Environ Sci Technol..  2009  43(3)  812-8  19245020  
Algae    Harada K, Ozaki K, Tsuzuki S, Kato H, Hasegawa M, Kuroda EK, Arii S, Tsuji K.  Blue color formation of cyanobacteria with beta-cyclocitral.  J Chem Ecol.  2009  35(11)  1295-301  19936836  
Algae  NIES-2417, ...  Howe AT, Bass D, Vickerman K, Chao EE, Cavalier-Smith T.  Phylogeny, taxonomy, and astounding genetic diversity of glissomonadida ord. nov., the dominant gliding zooflagellates in soil (Protozoa: Cercozoa).  Protist.  2009  160(2)  159-89  19324594  
Algae  NIES-98, 84...  Ishida K, Welker M, Christiansen G, Cadel-Six S, Bouchier C, Dittmann E, Hertweck C, Tandeau de Marsac N.  Plasticity and evolution of aeruginosin biosynthesis in cyanobacteria.  Appl Environ Microbiol.  2009  75(7)  2017-26  19201978  
Algae  NIES-1, 280...  Ishikawa M, Takahashi F, Nozaki H, Nagasato C, Motomura T, Kataoka H.  Distribution and phylogeny of the blue light receptors aureochromes in eukaryotes.  Planta.  2009  230(3)  543-52  19544070  
Algae  NIES-144  Issarapayup K, Powtongsook S, Pavasant P.  Flat panel airlift photobioreactors for cultivation of vegetative cells of microalga Haematococcus pluvialis.  J Biotechnol..  2009  142(3-4)  227-32  19422861  
Algae  NIES-848, 3...  Kamikawa R, Masuda I, Demura M, Oyama K, Yoshimatsu S, Kawachi M, Sako Y.  Mitochondrial group II introns in the raphidophycean flagellate Chattonella spp. suggest a diatom-to-Chattonella lateral group II intron transfer.  Protist.  2009  160(3)  364-75  19346162  
Algae  NIES-100  Kisugi T, Okino T.  Micropeptins from the freshwater cyanobacterium Microcystis aeruginosa (NIES-100).  J Nat Prod..  2009  72(4)  777-81  19260658  
Algae  NIES-1710  Lerche K, Hallmann A.  Stable nuclear transformation of Gonium pectorale.  BMC Biotechnol.  2009  9()  64  19591675  
Algae  NIES-2379, ...  Muramoto, K, Nakada, T, Shitara, T, Hara, Y, Nozaki, H.  Re-examination of the snow algal species Chloromonas miwae (Fukushima) Muramoto et al., comb. nov. (Volvocales, Chlorophyceae) from Japan, based on molecular phylogeny and cultured material.  Eur. J. Phycol.  2009  45(1)  27-37   
Algae  NIES-547  Nozaki H, Maruyama S, Matsuzaki M, Nakada T, Kato S, Misawa K.  Phylogenetic positions of Glaucophyta, green plants (Archaeplastida) and Haptophyta (Chromalveolata) as deduced from slowly evolving nuclear genes.  Mol Phylogenet Evol.  2009  53(3)  872-80  19698794  
Algae  NIES-109, 2...  Ohara, S., Uehara, T., Kimura, K., Yoshida, T., Fujiwara, S., Mizuguchi, H., Fuse, Y. & Yamada, E.  Behavior of humic substances and algal dissolved organic matter as precursors of trihalomethane in Lake Biwa.  Bunseki Kagaku  2009  58  231-240   
Algae  NIES-323  Okamura H, Kitano S, Toyota S, Harino H, Thomas KV.  Ecotoxicity of the degradation products of triphenylborane pyridine (TPBP) antifouling agent.  Chemosphere.  2009  74(9)  1275-8  19095285  
Algae  NIES-204  Sato, T; Hori, K.  Cloning, expression, and characterization of a novel anti-HIV lectin from the cultured cyanobacterium, Oscillatoria agardhii.  FISHERIES SCIENCE.  2009  75(3)  743-753   
Algae  NIES-837  Satoh M, Iwamoto K, Suzuki I, Shiraiwa Y.  Cold stress stimulates intracellular calcification by the coccolithophore, Emiliania huxleyi (Haptophyceae) under phosphate-deficient conditions.  Mar Biotechnol (NY)..  2009  11(3)  327-33  18830665  
Algae    Takaichi S, Maoka T, Mochimaru M.  Unique carotenoids in the terrestrial cyanobacterium Nostoc commune NIES-24: 2-hydroxymyxol 2'-fucoside, nostoxanthin and canthaxanthin.  Curr Microbiol.  2009  59(4)  413-9  19669835  
Algae  NIES-88, 89...  Tanabe Y, Sano T, Kasai F, Watanabe MM.  Recombination, cryptic clades and neutral molecular divergence of the microcystin synthetase (mcy) genes of toxic cyanobacterium Microcystis aeruginosa.  BMC Evol Biol..  2009  9()  115  19463155  
Algae  多数のため省略  Tanabe, Y., Kasai, F. & Watanabe, M. M.  Fine-scale spatial and temporal genetic differentiation　of water bloom-forming cyanobacterium Microcystis aeruginosa: revealed by multilocus sequence typing.  Environ. Microbiol. Rep.  2009  1  575-582   
Algae  NIES-109  Aoki S, Ohara S, Kimura K, Mizuguchi H, Fuse Y, Yamada E.  Characterization of dissolved organic matter released from Microcystis aeruginosa.  Anal Sci..  2008  24(3)  389-94  18332548  
Algae  NIES-109, 2...  Aoki S, Ohara S, Kimura K, Mizuguchi H, Fuse Y, Yamada E.  Characterization of fluorophores released from three kinds of lake phytoplankton using gel chromatography and fluorescence spectrophotometry.  Anal Sci.  2008  24(11)  1461-7  18997376  
Algae  NIES-843, 9...  Cadel-Six S, Dauga C, Castets AM, Rippka R, Bouchier C, Tandeau de Marsac N, Welker M.  Halogenase genes in nonribosomal peptide synthetase gene clusters of Microcystis (cyanobacteria): sporadic distribution and evolution.  Mol Biol Evol..  2008  25(9)  2031-41  18614525  
Algae  NIES-293  Cattolico RA, Jacobs MA, Zhou Y, Chang J, Duplessis M, Lybrand T, McKay J, Ong HC, Sims E, Rocap G.  Chloroplast genome sequencing analysis of Heterosigma akashiwo CCMP452 (West Atlantic) and NIES293 (West Pacific) strains.  BMC Genomics..  2008  9()  211  18462506  
Algae  NIES-845, 2...  Conradle, KR; Du Plessis, S; Venter, A.  Re-identification of "Oscillatoria simplicissima" isolated from the Vaal River, South Africa, as Planktothrix pseudagardhii.  SOUTH AFRICAN JOURNAL OF BOTANY.  2008  74 (1)  101-110   
Algae  NIES-1710, ...  Hamaji T, Ferris PJ, Coleman AW, Waffenschmidt S, Takahashi F, Nishii I, Nozaki H.  Identification of the minus-dominance gene ortholog in the mating-type locus of Gonium pectorale.  Genetics.  2008  178(1)  283-94  18202374  
Algae  NIES-9, 15,...  Hamana K  Cellular polyamines of phototrophs and heterotrophs belonging to the lower eukaryotic phyla Cercozoa, Euglenozoa, Heterokonta and Metamonada.  J Gen Appl Microbiol.  2008  54(2)  135-40  18497488  
Algae  NIES-26, 33...  Hamana K, Kobayashi M, Yokota A, Sekiguchi H, Niitsu M.  Cellular polyamine profiles in cyanobacteria.  Microbiol Cult Coll.  2008  24  3-8   
Algae  NIES-144  Hu, ZY, Li, YT, Sommerfeld, M, Chen, F, Hu, Q.  Enhanced protection against oxidative stress in an astaxanthin-overproduction Haematococcus mutant (Chlorophyceae).  Eur. J. Phycol.  2008  43(4)  365-376   
Algae  NIES-88, 98...  Jang MH, Ha K, Takamura N.  Microcystin production by Microcystis aeruginosa exposed to different stages of herbivorous zooplankton.  Toxicon..  2008  51(5)  882-9  18243271  
Algae  NIES-1863, ...  Kai A, Yoshii Y, Nakayama T, Inouye I.  Aurearenophyceae classis nova, a new class of Heterokontophyta based on a new marine unicellular alga Aurearena cruciata gen. et sp. nov. inhabiting sandy beaches.  Protist.  2008  159(3)  435-57  18358776  
Algae  NIES-298  Kim, BH, Hwang, SJ, Han, MS.  Bacterium and Fish-Mediated Morphological Changes of the Toxic Cyanobacterium Microcystis aeruginosa.  J. Freshw. Ecol.  2008  23(4)  613-622   
Algae  NIES-16, 17...  Kooistra WH, Sarno D, Balzano S, Gu H, Andersen RA, Zingone A.  Global diversity and biogeography of Skeletonema species (bacillariophyta).  Protist.  2008  159(2)  177-93  18042429  
Algae  NIES-39  Lu, J., Satoh, H. & Takeuchi, T.  Development of models of threshold and efficient algal densities for larval and juvenile tilapia Oreochromis niloticus on raw Spirulina.  Aquaculture.  2008  285  249-254   
Algae  NIES-48  Maruyama S, Misawa K, Iseki M, Watanabe M, Nozaki H.  Origins of a cyanobacterial 6-phosphogluconate dehydrogenase in plastid-lacking eukaryotes.  BMC Evol Biol.  2008  8()  151  18485228  
Algae    Nagao M, Matsui K, Uemura M.  Klebsormidium flaccidum, a charophycean green alga, exhibits cold acclimation that is closely associated with compatible solute accumulation and ultrastructural changes.  Plant Cell Environ..  2008  31(6)  872-85  18315534  
Algae  NIES-1  Naito, K., Imai, I. & Nakahara, H.  Complexation of iron by microbial siderophores and effects of iron chelates on the growth of marine microalgae causing red tides.  Phycol. Res.  2008  56  58-67   
Algae  NIES-123, 4...  Nakada T, Nozaki H, Proschold T.  Molecular phylogeny, ultrastructure, and taxonomic revision of Chlorogonium (Chlorophyta): emendation of Chlorogonium and description of Gungnir gen.nov. and Rusalka gen.nov.  J. Phycol.  2008  44(3)  751-760   
Algae  NIES-1852, ...  Nozaki, H.  Zygote germination in Pleodorina starrii (Volvocaceae, Chlorophyta).  Biologia  2008  63  778-780   
Algae  NIES-670  Riisberg I, Edvardsen B.  Genetic variation in bloom-forming ichthyotoxic Pseudochattonella species (Dictyochophyceae, Heterokonta) using nuclear, mitochondrial and plastid DNA sequence data.  Eur. J. Phycol.  2008  43(4)  413-422   
Algae  NIES-205  Rounge TB, Rohrlack T, Kristensen T, Jakobsen KS.  Recombination and selectional forces in cyanopeptolin NRPS operons from highly similar, but geographically remote Planktothrix strains.  BMC Microbiol..  2008  8()  141  18727817  
Algae  NIES-487  Sato, Y., Ito, A., Tate, N., Sasaki, A., Aizawa, J. & Umita, T.  Impact of coexistent metal on survival of diatom in presence of polynuclear hydroxy-alminium ion.  Environ. Eng. Res.  2008  45  139-145   
Algae    Sekimoto S, Yokoo K, Kawamura Y, Honda D.  Taxonomy, molecular phylogeny, and ultrastructural morphology of Olpidiopsis porphyrae sp. nov. (Oomycetes, straminipiles), a unicellular obligate endoparasite of Bangia and Porphyra spp. (Bangiales, Rhodophyta).  Mycol Res..  2008  112(Pt 3)  361-74  18308530  
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