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Reference list
| Resource Info. |
Reference Info. |
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Species
|
Resource name
|
Author
|
Title
|
Journal
|
Year published
|
Volume |
Pages |
Pubmed ID |
| Lotus / Glycine |
Super Root |
Bo Jian, Wensheng Hou, Cunxiang Wu, Bin Liu, Wei Liu, Shikui Song, Yurong Bi and Tianfu Han
|
Agrobacterium rhizogenes-mediated transformation of Superroot-derived Lotus corniculatus plants: a valuable tool for functional genomics |
BMC Plant Biology |
2009 |
9-78 |
|
|
| Lotus / Glycine |
L. japonicu... |
Hakoyama T, Watanabe H, Tomita J, Yamamoto A, Sato S, Mori Y, Kouchi H, Suganuma N.
|
Nicotianamine synthase specifically expressed in root nodules of Lotus japonicus. |
Planta.. |
2009 |
230(2) |
309-17 |
19455352
|
| Lotus / Glycine |
Lotus japon... |
Hanyu M, Fujimoto H, Tejima K, Saeki K.
|
Functional differences of two distinct catalases in Mesorhizobium loti MAFF303099 under free-living and symbiotic conditions. |
J Bacteriol. |
2009 |
191(5) |
1463-71 |
19074374
|
| Lotus / Glycine |
MG-20 |
Hiraoka Y, Ueda H, Sugimoto Y.
|
Molecular responses of Lotus japonicus to parasitism by the compatible species Orobanche aegyptiaca and the incompatible species Striga hermonthica. |
J Exp Bot.. |
2009 |
60(2) |
641-50 |
19088337
|
| Lotus / Glycine |
L. japonicu... |
Ichida H, Yoneyama K, Koba T, Abe T.
|
Epigenetic modification of rhizobial genome is essential for efficient nodulation. |
Biochem Biophys Res Commun. |
2009 |
389(2) |
301-4 |
19720053
|
| Lotus / Glycine |
Lotus japon... |
Ishida K, Niwa Y, Yamashino T, Mizuno T.
|
A genome-wide compilation of the two-component systems in Lotus japonicus. |
DNA Res.. |
2009 |
16(4) |
237-47 |
19675111
|
| Lotus / Glycine |
|
Kubo M, Ueda H, Park P, Kawaguchi M, Sugimoto Y.
|
Reactions of Lotus japonicus ecotypes and mutants to root parasitic plants. |
J Plant Physiol.. |
2009 |
166(4) |
353-62 |
18760498
|
| Lotus / Glycine |
Gifu B-129,... |
Maekawa-Yoshikawa M, Müller J, Takeda N, Maekawa T, Sato S, Tabata S, Perry J, Wang TL, Groth M, Brachmann A, Parniske M.
|
The temperature-sensitive brush mutant of the legume Lotus japonicus reveals a link between root development and nodule infection by rhizobia. |
Plant Physiol. |
2009 |
149(4) |
1785-96 |
19176723
|
| Lotus / Glycine |
L. japonicu... |
Masahiro Okada, Sungwook Park, Takahiro Koshizawa and Minoru Ueda.
|
(R)-Eucomic acid, a leaf-opening factor of the model organism, Lotus japonicus. |
Tetrahedron |
2009 |
65 |
2136-2141 |
|
| Lotus / Glycine |
Lotus japon... |
Perry J, Brachmann A, Welham T, Binder A, Charpentier M, Groth M, Haage K, Markmann K, Wang TL, Parniske M.
|
TILLING in Lotus japonicus identified large allelic series for symbiosis genes and revealed a bias in functionally defective EMS alleles towards glycine replacements. |
Plant Physiol. |
2009 |
() |
|
19641028
|
| Lotus / Glycine |
Gifu B-129,... |
S. Okazaki, S. Okabe, M. Higashi, Y. Shimoda, S. Sato, S. Tabata, M. Hashiguchi, R. Akashi and K. Saeki.
|
Identification and functional analysis of type III effector proteins in Mesorhizobium loti. |
Molecular Plant-Microbe Interaction |
2009 |
|
|
|
| Lotus / Glycine |
L: MG20 |
Shimoda Y, Shimoda-Sasakura F, Kucho K, Kanamori N, Nagata M, Suzuki A, Abe M, Higashi S, Uchiumi T.
|
Overexpression of class 1 plant hemoglobin genes enhances symbiotic nitrogen fixation activity between Mesorhizobium loti and Lotus japonicus. |
Plant J. |
2009 |
57(2) |
254-63 |
18801013
|
| Lotus / Glycine |
L: MG20 |
Tominaga A, Nagata M, Futsuki K, Abe H, Uchiumi T, Abe M, Kucho KI, Hashiguchi M, Akashi R, Hirsch AM, Arima S, Suzuki A.
|
Enhanced nodulation and nitrogen fixation in the ABA low-sensitive mutant enf1 (enhanced nitrogen fixation 1) of Lotus japonicus. |
Plant Physiol. |
2009 |
() |
|
19776164
|
| Lotus / Glycine |
G.max |
Yoichi Kita, Moemen S. Hanafy, Michihito Deguchi, Hisakazu Hasegawa, Teruhiko Terakawa, Keisuke Kitamura and Masao Ishimoto.
|
Generation and characterization of herbicide-resistant soybean plants expressing novel phosphinothricin N-acetyltransferase genes. |
Breeding Science. |
2009 |
59(3) |
245-251 |
|
| Lotus / Glycine |
Lotus japon... |
Yokota K, Fukai E, Madsen LH, Jurkiewicz A, Rueda P, Radutoiu S, Held M, Hossain MS, Szczyglowski K, Morieri G, Oldroyd GE, Downie JA, Nielsen MW, Rusek AM, Sato S, Tabata S, James EK, Oyaizu H, Sandal N, Stougaard J.
|
Rearrangement of actin cytoskeleton mediates invasion of Lotus japonicus roots by Mesorhizobium loti. |
Plant Cell.. |
2009 |
21(1) |
267-84 |
19136645
|
| Lotus / Glycine |
Miyakojima ... |
Akihiro Suzuki, Hisatoshi Hara, Tomoyo Kinoue, Mikiko Abe, Toshiki Uchiumi, Ken-ichi Kucho, Shiro Higashi, Ann M. Hirsch and Susumu Arima
|
Split-root study of autoregulation of nodulation in the model legume Lotus japonicus |
Journal of Plant Research |
2008 |
121 (2) |
|
|
| Lotus / Glycine |
Gifu B-129 ... |
Asamizu E, Shimoda Y, Kouchi H, Tabata S, Sato S.
|
A positive regulatory role for LjERF1 in the nodulation process is revealed by systematic analysis of nodule-associated transcription factors of Lotus japonicus. |
Plant Physiol. |
2008 |
147(4) |
2030-40 |
18567832
|
| Lotus / Glycine |
Lotus japon... |
Charpentier M, Bredemeier R, Wanner G, Takeda N, Schleiff E, Parniske M.
|
Lotus japonicus CASTOR and POLLUX are ion channels essential for perinuclear calcium spiking in legume root endosymbiosis. |
Plant Cell.. |
2008 |
20(12) |
3467-79 |
19106374
|
| Lotus / Glycine |
L. japonicu... |
Fukai E, Dobrowolska AD, Madsen LH, Madsen EB, Umehara Y, Kouchi H, Hirochika H, Stougaard J.
|
Transposition of a 600 thousand-year-old LTR retrotransposon in the model legume Lotus japonicus. |
Plant Mol Biol.. |
2008 |
68(6) |
653-63 |
18802778
|
| Lotus / Glycine |
|
Hamwieh A, Xu D.
|
Conserved salt tolerance quantitative trait locus (QTL) in wild and cultivated soybeans. |
Breeding Science. |
2008 |
58(4) |
355-359 |
|
| Lotus / Glycine |
Lotus japon... |
Hougaard BK, Madsen LH, Sandal N, de Carvalho Moretzsohn M, Fredslund J, Schauser L, Nielsen AM, Rohde T, Sato S, Tabata S, Bertioli DJ, Stougaard J.
|
Legume anchor markers link syntenic regions between Phaseolus vulgaris, Lotus japonicus, Medicago truncatula and Arachis. |
Genetics. |
2008 |
179(4) |
2299-312 |
18689902
|
| Lotus / Glycine |
Lotus japon... |
Keita Suwabe, Kentaro Yano.
|
Omics databases in plant science: key to systems biology. |
Plant Biotechnology. |
2008 |
25 |
413-422 |
|
| Lotus / Glycine |
|
Koutaro SUZUKI, Hiroko OGURO, Takeo YAMAKAWA, Akihiro YAMAMOTO , Shoichiro AKAO and Yuichi SAEKI.
|
Diversity and distribution of indigenous soybean-nodulating rhizobia in the Okinawa islands, Japan. |
Soil Science & Plant Nutrition |
2008 |
54(2) |
237-246 |
|
| Lotus / Glycine |
G: wild soy... |
Kyohei Kanamaru, Shaodong Wang, Tetsuya Yamada, Jun Abe and Keisuke Kitamura.
|
Genetic analysis and biochemical characterization of the high lutein trait of wild soybean (Glycine soja Sieb. et Zucc.). |
Breeding Science. |
2008 |
58(4) |
393-400 |
|
| Lotus / Glycine |
|
Liolios K, Mavromatis K, Tavernarakis N, Kyrpides NC.
|
The Genomes On Line Database (GOLD) in 2007: status of genomic and metagenomic projects and their associated metadata. |
Nucleic Acids Res. |
2008 |
36(Database issue) |
D475-9 |
17981842
|
| Lotus / Glycine |
MG-20 |
Maekawa T, Kusakabe M, Shimoda Y, Sato S, Tabata S, Murooka Y, Hayashi M.
|
Polyubiquitin promoter-based binary vectors for overexpression and gene silencing in Lotus japonicus. |
Mol Plant Microbe Interact.. |
2008 |
21(4) |
375-82 |
18321183
|
| Lotus / Glycine |
G.max |
Masayuki Shibata, Kiyohiko Takayama, Aya Ujiie, Tetsuya Yamada, Jun Abe and Keisuke Kitamura.
|
Genetic relationship between lipid content and linolenic acid concentration in soybean seeds. |
Breeding Science. |
2008 |
58(4) |
361-366 |
|
| Lotus / Glycine |
Gifu B-129 |
Mishima E, Hosokawa A, Imaizumi-Anraku H, Saito K, Kawaguchi M, Saeki K.
|
Requirement for Mesorhizobium loti ornithine transcarbamoylase for successful symbiosis with Lotus japonicus as revealed by an unexpected long-range genome deletion. |
Plant Cell Physiol. |
2008 |
49(3) |
301-13 |
18184692
|
| Lotus / Glycine |
L:MG20 |
Nagata M, Murakami E, Shimoda Y, Shimoda-Sasakura F, Kucho K, Suzuki A, Abe M, Higashi S, Uchiumi T.
|
Expression of a class 1 hemoglobin gene and production of nitric oxide in response to symbiotic and pathogenic bacteria in Lotus japonicus. |
Mol Plant Microbe Interact.. |
2008 |
21(9) |
1175-83 |
18700822
|
| Lotus / Glycine |
Lotus japon... |
Sato S, Nakamura Y, Kaneko T, Asamizu E, Kato T, Nakao M, Sasamoto S, Watanabe A, Ono A, Kawashima K, Fujishiro T, Katoh M, Kohara M, Kishida Y, Minami C, Nakayama S, Nakazaki N, Shimizu Y, Shinpo S, Takahashi C, Wada T, Yamada M, Ohmido N, Hayashi M, Fukui K, Baba T, Nakamichi T, Mori H, Tabata S.
|
Genome structure of the legume, Lotus japonicus. |
DNA Res.. |
2008 |
15(4) |
227-39 |
18511435
|
| Lotus / Glycine |
|
Suzuki A, Yamashita K, Ishihara M, Nakahara K, Abe M, Kucho K, Uchiumi T, Higashi S, Arima S.
|
Enhanced symbiotic nitrogen fixation by Lotus japonicus containing an antisense b -1,3-glucanase gene. |
Plant Biotechnology. |
2008 |
25 |
357-360 |
|
| Lotus / Glycine |
G.max mutan... |
T. Anai, T. Yamada, R. Hideshima, T. Kinoshita, S. M. Rhaman and Y. Takagi.
|
Two high-oleic-acid soybean mutants, M23 and KK21, have disrupted microsomal omega-6 fatty acid desaturase, encoded by GmFAD2-1a. |
Breeding Science. |
2008 |
58(4) |
447-452 |
|
| Lotus / Glycine |
|
Tanaka H, Toyama J, Hashiguchi M, Kutsuna Y, Tsuruta S, Akashi R, Hoffmann F.
|
Transgenic superroots of Lotus corniculatus can be regenerated from superroot-derived leaves following Agrobacterium-mediated transformation. |
J Plant Physiol.. |
2008 |
165(12) |
1313-6 |
18471930
|
| Lotus / Glycine |
|
Umezawa T, Sakurai T, Totoki Y, Toyoda A, Seki M, Ishiwata A, Akiyama K, Kurotani A, Yoshida T, Mochida K, Kasuga M, Todaka D, Maruyama K, Nakashima K, Enju A, Mizukado S, Ahmed S, Yoshiwara K, Harada K, Tsubokura Y, Hayashi M, Sato S, Anai T, Ishimoto M, Funatsuki H, Teraishi M, Osaki M, Shinano T, Akashi R, Sakaki Y, Yamaguchi-Shinozaki K, Shinozaki K.
|
Sequencing and analysis of approximately 40,000 soybean cDNA clones from a full-length-enriched cDNA library. |
DNA Res.. |
2008 |
15(6) |
333-46 |
18927222
|
| Lotus / Glycine |
Gifu B-129,... |
Wang X, Sato S, Tabata S, Kawasaki S.
|
A high-density linkage map of Lotus japonicus based on AFLP and SSR markers. |
DNA Res.. |
2008 |
15(5) |
323-32 |
18794159
|
| Lotus / Glycine |
L. japonicu... |
Yano K, Yoshida S, Müller J, Singh S, Banba M, Vickers K, Markmann K, White C, Schuller B, Sato S, Asamizu E, Tabata S, Murooka Y, Perry J, Wang TL, Kawaguchi M, Imaizumi-Anraku H, Hayashi M, Parniske M.
|
CYCLOPS, a mediator of symbiotic intracellular accommodation. |
Proc Natl Acad Sci U S A. |
2008 |
105(51) |
20540-5 |
19074278
|
| Lotus / Glycine |
Lotus japon... |
Gondo T, Sato S, Okumura K, Tabata S, Akashi R, Isobe S.
|
Quantitative trait locus analysis of multiple agronomic traits in the model legume Lotus japonicus. |
Genome.. |
2007 |
50(7) |
627-37 |
17893740
|
| Lotus / Glycine |
Gifu B-129 |
Günther C, Schlereth A, Udvardi M, Ott T.
|
Metabolism of reactive oxygen species is attenuated in leghemoglobin-deficient nodules of Lotus japonicus. |
Mol Plant Microbe Interact.. |
2007 |
20(12) |
1596-603 |
17990967
|
| Lotus / Glycine |
Misuzudaizu... |
Hisano H, Sato S, Isobe S, Sasamoto S, Wada T, Matsuno A, Fujishiro T, Yamada M, Nakayama S, Nakamura Y, Watanabe S, Harada K, Tabata S.
|
Characterization of the soybean genome using EST-derived microsatellite markers. |
DNA Res.. |
2007 |
14(6) |
271-81 |
18192281
|
| Lotus / Glycine |
L: MG-20 |
Ichida H, Matsuyama T, Abe T, Koba T.
|
DNA adenine methylation changes dramatically during establishment of symbiosis. |
FEBS J.. |
2007 |
274(4) |
951-62 |
17250744
|
| Lotus / Glycine |
Gifu B-129 |
Kai K, Wakasa K, Miyagawa H.
|
Metabolism of indole-3-acetic acid in rice: identification and characterization of N-beta-D-glucopyranosyl indole-3-acetic acid and its conjugates. |
Phytochemistry. |
2007 |
68(20) |
2512-22 |
17628621
|
| Lotus / Glycine |
L. japonicu... |
Küster H, Becker A, Firnhaber C, Hohnjec N, Manthey K, Perlick AM, Bekel T, Dondrup M, Henckel K, Goesmann A, Meyer F, Wipf D, Requena N, Hildebrandt U, Hampp R, Nehls U, Krajinski F, Franken P, Pühler A.
|
Development of bioinformatic tools to support EST-sequencing, in silico- and microarray-based transcriptome profiling in mycorrhizal symbioses. |
Phytochemistry. |
2007 |
68(1) |
19-32 |
17081576
|
| Lotus / Glycine |
G.max |
Maria Stefanie Dwiyanti, Aya Ujiie, Le Thi Bich Thuy, Tetsuya Yamada and Keisuke Kitamura.
|
Genetic Analysis of High α-tocopherol Content in Soybean Seeds. |
Breeding Science. |
2007 |
57(1) |
23-28 |
|
| Lotus / Glycine |
|
Matsui A, Yin Y, Yamanaka K, Iwasaki M, Ashihara H.
|
Metabolic fate of nicotinamide in higher plants. |
Physiol Plant.. |
2007 |
131(2) |
191-200 |
18251891
|
| Lotus / Glycine |
Gifu B-129 |
Okazaki S, Hattori Y, Saeki K.
|
The Mesorhizobium loti purB gene is involved in infection thread formation and nodule development in Lotus japonicus. |
J Bacteriol. |
2007 |
189(22) |
8347-52 |
17827288
|
| Lotus / Glycine |
|
Poch HL, López RH, Clark SJ.
|
Ecotypes of the model legume Lotus japonicus vary in their interaction phenotypes with the root-knot nematode Meloidogyne incognita. |
Ann Bot.. |
2007 |
99(6) |
1223-9 |
17475628
|
| Lotus / Glycine |
L. japonicu... |
Sato S, Nakamura Y, Asamizu E, Isobe S, Tabata S.
|
Genome sequencing and genome resources in model legumes. |
Plant Physiol. |
2007 |
144(2) |
588-93 |
17556522
|
| Lotus / Glycine |
|
Schumpp O, Ramel ME, Gugerli P, Broughton WJ, Deakin WJ.
|
Identification of a Lotus viral pathogen. |
J Plant Res.. |
2007 |
120(5) |
651-4 |
17680177
|
| Lotus / Glycine |
G.max |
Shaodong Wang, Kyohei Kanamaru, Wenbin Li, Jun Abe, Tetsuya Yamada and Keisuke Kitamura.
|
Simultaneous Accumulation of High Contents of α-Tocopherol and Lutein is Possible in Seeds of Soybean (Glycine max (L.) Merr.) |
Breeding Science. |
2007 |
57(4) |
297-304 |
|
| Lotus / Glycine |
MG-20 |
Shimada N, Sato S, Akashi T, Nakamura Y, Tabata S, Ayabe S, Aoki T.
|
Genome-wide analyses of the structural gene families involved in the legume-specific 5-deoxyisoflavonoid biosynthesis of Lotus japonicus. |
DNA Res.. |
2007 |
14(1) |
25-36 |
17452423
|
|