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Species Resource name Author Title Journal Year published Volume Pages Pubmed ID
C.intestinalis  E[MiTSAdTPO...  Dahlberg C, Auger H, Dupont S, Sasakura Y, Thorndyke M, Joly JS.  Refining the Ciona intestinalis model of central nervous system regeneration.  PLoS One..  2009  4(2)  e4458  19212465  
C.intestinalis    Fujikawa T, Munakata T, Kondo SI, Satoh N, Wada S.  Stress response in the ascidian Ciona intestinalis: transcriptional profiling of genes for the heat shock protein 70 chaperone system under heat stress and endoplasmic reticulum stress.  Cell Stress Chaperones..  2009  ()    19629754  
C.intestinalis    Horie T, Nakagawa M, Sasakura Y, Kusakabe TG.  Cell type and function of neurons in the ascidian nervous system.  Dev Growth Differ..  2009  51(3)  207-20  19379276  
C.intestinalis    Imai KS, Stolfi A, Levine M, Satou Y.  Gene regulatory networks underlying the compartmentalization of the Ciona central nervous system.  Development.  2009  136(2)  285-93  19088089  
C.intestinalis    Kanda M, Wada H, Fujiwara S.  Epidermal expression of Hox1 is directly activated by retinoic acid in the Ciona intestinalis embryo.  Dev Biol.  2009  ()    19782671  
C.intestinalis    Kataoka, Y., Mishina, R. and Fujiwara, S.  Mechanism of DNA replication-dependent transcriptional activation of the acetylcholinesterase gene in the Ciona intestinalis embryo.  Dev. Growth Differ.  2009       
C.intestinalis    Kawada T, Aoyama M, Okada I, Sakai T, Sekiguchi T, Ogasawara M, Satake H.  A novel inhibitory gonadotropin-releasing hormone-related neuropeptide in the ascidian, Ciona intestinalis.  Peptides..  2009  ()    19712719  
C.intestinalis    Konno, A., Kaizu, M., Hotta, K., Horie, T., Sasakura, Y., Ikeo, K. and Inaba, K.  Distribution and structural diversity of cilia in tadpole larvae of the ascidian Ciona intestinalis.  Dev. Biol.  2009       
C.intestinalis    Koyano R, Ishida S, Fujiwara S.  Transcriptional regulation of the retinoic acid receptor in the dorsal midline epidermis in the Ciona intestinalis embryo.  Dev Growth Differ..  2009  ()    19824898  
C.intestinalis    Kusakabe TG, Takimoto N, Jin M, Tsuda M.  Evolution and the origin of the visual retinoid cycle in vertebrates.  Philos Trans R Soc Lond B Biol Sci..  2009  364(1531)  2897-910  19720652  
C.intestinalis    Mita, K., Koyanagi, R., Azumi, K., Sabau, SV. and Fujiwara, S.  Identification of genes downstream of Nodal in the Ciona intestinalis embryo.  Zool. Sci.  2009       
C.intestinalis    Mizuno K, Padma P, Konno A, Satouh Y, Ogawa K, Inaba K.  A novel neuronal calcium sensor family protein, calaxin, is a potential Ca(2+)-dependent regulator for the outer arm dynein of metazoan cilia and flagella.  Biol Cell..  2009  101(2)  91-103  18620543  
C.intestinalis  tail regres...  Nakayama-Ishimura A, Chambon JP, Horie T, Satoh N, Sasakura Y.  Delineating metamorphic pathways in the ascidian Ciona intestinalis.  Dev Biol.  2009  326(2)  357-67  19100250  
C.intestinalis    Nomura M, Nakajima A, Inaba K.  Proteomic profiles of embryonic development in the ascidian Ciona intestinalis.  Dev Biol.  2009  325(2)  468-81  19026627  
C.intestinalis    Sasaki N, Ogasawara M, Sekiguchi T, Kusumoto S, Satake H.  Toll-like receptors of the ascidian Ciona intestinalis: prototypes with hybrid functionalities of vertebrate Toll-like receptors.  J Biol Chem.  2009  284(40)  27336-43  19651780  
C.intestinalis    Sasakura, Y., Inaba, K., Satoh, N., Kondo, M. and Akasaka, K.  Ciona intestinalis and Oxycomanthus japonicus, representatives of marine invertebrates.  Experimental Animals.  2009       
C.intestinalis    Satake, H. and Sasaki, N.  Comparative view on Toll-like receptors of lower animals.  Zool. Sci.  2009       
C.intestinalis    Sekiguchi T, Suzuki N, Fujiwara N, Aoyama M, Kawada T, Sugase K, Murata Y, Sasayama Y, Ogasawara M, Satake H.  Calcitonin in a protochordate, Ciona intestinalis--the prototype of the vertebrate calcitonin/calcitonin gene-related peptide superfamily.  FEBS J..  2009  276(16)  4437-47  19691140  
C.intestinalis    Tsuyoshi Kawada, Toshio Sekiguchi, Tsubasa Sakai, Masato Aoyama, Honoo Satake.  Neuropeptides, hormone peptides, and their receptors in Ciona intestinalis:an update.  Zool. Sci.  2009       
C.intestinalis    Yamada L, Saito T, Taniguchi H, Sawada H, Harada Y.  Comprehensive egg-coat proteome of an ascidian Ciona intestinalis reveals gamete recognition molecules involved in self-sterility.  J Biol Chem.  2009  284  9402-9410  19193647  
C.intestinalis    Yamada S, Hotta K, Yamamoto TS, Ueno N, Satoh N, Takahashi H.  Interaction of notochord-derived fibrinogen-like protein with Notch regulates the patterning of the central nervous system of Ciona intestinalis embryos.  Dev Biol.  2009  328(1)  1-12  19171129  
C.intestinalis    Aoyama M, Kawada T, Fujie M, Hotta K, Sakai T, Sekiguchi T, Oka K, Satoh N, Satake H.  A novel biological role of tachykinins as an up-regulator of oocyte growth: identification of an evolutionary origin of tachykininergic functions in the ovary of the ascidian, Ciona intestinalis.  Endocrinology..  2008  149(9)  4346-56  18483149  
C.intestinalis    Azumi, K., Amano, S., Sabau, S.V., Kamimura, A., Satoh, N. and Koyanagi, R.  Application of ascidian DNA microarray analysis for risk assessment of marine chemical pollutants.  Biological Responses to Chemical Pollutants―Interdisciplinary Studies on Environmental Chemistry.  2008  1  107-110   
C.intestinalis    Hozumi A, Padma P, Toda T, Ide H, Inaba K.  Molecular characterization of axonemal proteins and signaling molecules responsible for chemoattractant-induced sperm activation in Ciona intestinalis.  Cell Motil Cytoskeleton..  2008  65(3)  249-67  18189282  
C.intestinalis    Kawada T, Sekiguchi T, Itoh Y, Ogasawara M, Satake H.  Characterization of a novel vasopressin/oxytocin superfamily peptide and its receptor from an ascidian, Ciona intestinalis.  Peptides..  2008  29(10)  1672-8  18586058  
C.intestinalis    Nakashima K, Sugiyama J, Satoh N.  A spectroscopic assessment of cellulose and the molecular mechanisms of cellulose biosynthesis in the ascidian Ciona intestinalis.  Marine Genomics.  2008  1  9-14   
C.intestinalis    Nishiyama A, Fujiwara S.  RNA interference by expressing short hairpin RNA in the Ciona intestinalis embryo.  Dev Growth Differ..  2008  50(6)  521-9  18510713  
C.intestinalis    Noda T, Satoh N.  A comprehensive survey of cadherin superfamily gene expression patterns in Ciona intestinalis.  Gene Expr Patterns..  2008  8(5)  349-56  18400563  
C.intestinalis  Ju[SBFr3dTP...  Sasakura Y, Konno A, Mizuno K, Satoh N, Inaba K.  Enhancer detection in the ascidian Ciona intestinalis with transposase-expressing lines of Minos.  Dev Dyn..  2008  237(1)  39-50  17948255  
C.intestinalis    Shibata, F. T., Sato, A., Oji, T. and Akasaka, K.  Development and growth of the feather star Oxycomanthus japonicus to sexual maturity.  Zool. Sci.  2008  23  1075-1083   
C.intestinalis    Shimai K, Hirano A, Kitaura Y, Kitano Y, Itoh A, Kiuchi A, Sasaki N, Nishikata T.  Novel ubiquitous promoters and expression-vector optimization in ascidian embryos.  Invert. Repro. Devl.  2008  51  103-110   
C.intestinalis    Shoguchi E, Hamaguchi M, Satoh N.  Genome-wide network of regulatory genes for construction of a chordate embryo.  Dev Biol.  2008  316(2)  498-509  18281030  
C.intestinalis    Wada S, Hamada M, Kobayashi K, Satoh N.  Novel genes involved in canonical Wnt/beta-catenin signaling pathway in early Ciona intestinalis embryos.  Dev Growth Differ..  2008  50(4)  215-27  18336583  
C.intestinalis    Yoshida K, Saiga H.  Left-right asymmetric expression of Pitx is regulated by the asymmetric Nodal signaling through an intronic enhancer in Ciona intestinalis.  Dev Genes Evol..  2008  218(7)  353-60  18546017  
C.intestinalis  Mu[ISMiTSAd...  Awazu S, Matsuoka T, Inaba K, Satoh N, Sasakura Y.  High-throughput enhancer trap by remobilization of transposon Minos in Ciona intestinalis.  Genesis..  2007  45(5)  307-17  17464954  
C.intestinalis  Tg[MiCiNutG...  Joly JS, Kano S, Matsuoka T, Auger H, Hirayama K, Satoh N, Awazu S, Legendre L, Sasakura Y.  Culture of Ciona intestinalis in closed systems.  Dev Dyn..  2007  236(7)  1832-40  17394236  
C.intestinalis    Mita K, Fujiwara S.  Nodal regulates neural tube formation in the Ciona intestinalis embryo.  Dev Genes Evol..  2007  217(8)  593-601  17624550  
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