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Species Resource name Author Title Journal Year published Volume Pages Pubmed ID
Medaka  BAC clone  Herpin A, Braasch I, Kraeussling M, Schmidt C, Thoma EC, Nakamura S, Tanaka M, Schartl M.  Transcriptional rewiring of the sex determining dmrt1 gene duplicate by transposable elements.  PLoS Genet.  2010  6(2)  e1000844  20169179  
Medaka  drR, Quinte...  Imada H, Hoki M, Suehiro Y, Okuyama T, Kurabayashi D, Shimada A, Naruse K, Takeda H, Kubo T, Takeuchi H.  Coordinated and cohesive movement of two small conspecific fish induced by eliciting a simultaneous optomotor response.  PLoS One..  2010  5(6)  e11248  20582314  
Medaka  medaka Hd-r...  Inohaya K, Takano Y, Kudo A.  Production of Wnt4b by floor plate cells is essential for the segmental patterning of the vertebral column in medaka.  Development.  2010  137(11)  1807-13  20460365  
Medaka  Oryzias cur...  Kato M, Takehana Y, Sakaizumi M, Hamaguchi S.  A sex-determining region on the Y chromosome controls the sex-reversal ratio in interspecific hybrids between Oryzias curvinotus females and Oryzias latipes males.  Heredity..  2010  104(2)  191-5  19756038  
Medaka    Kimura T, Naruse K.  M-marker 2009, a marker set for mapping medaka mutants using PCR length polymorphisms with an automated microchip gel electrophoresis system.  Biotechniques.  2010  49(2)  582-3  20701594  
Medaka  dr-R, T5, Q...  Kuroyanagi Y, Okuyama T, Suehiro Y, Imada H, Shimada A, Naruse K, Takeda H, Kubo T, Takeuchi H.  Proliferation zones in adult medaka (Oryzias latipes) brain.  Brain Res..  2010  ()    20114034  
Medaka    Nakamura S, Kobayashi K, Nishimura T, Higashijima S, Tanaka M.  Identification of germline stem cells in the ovary of the teleost medaka.  Science.  2010  328(5985)  1561-3  20488987  
Medaka  medaka muta...  Ohisa S, Inohaya K, Takano Y, Kudo A.  sec24d encoding a component of COPII is essential for vertebra formation, revealed by the analysis of the medaka mutant, vbi.  Dev Biol.  2010  342(1)  85-95  20346938  
Medaka  database  Sasado T, Tanaka M, Kobayashi K, Sato T, Sakaizumi M, Naruse K.  The National BioResource Project Medaka (NBRP Medaka): an integrated bioresource for biological and biomedical sciences.  Exp Anim..  2010  59(1)  13-23  20224166  
Medaka  d-rR strain...  Suehiro Y, Kinoshita M, Okuyama T, Shimada A, Naruse K, Takeda H, Kubo T, Hashimoto M, Takeuchi H.  Transient and permanent gene transfer into the brain of the teleost fish medaka (Oryzias latipes) using human adenovirus and the Cre-loxP system.  FEBS Lett..  2010  ()    20621097  
Medaka  medaka muta...  Taneda Y, Konno S, Makino S, Morioka M, Fukuda K, Imai Y, Kudo A, Kawakami A.  Epigenetic control of cardiomyocyte production in response to a stress during the medaka heart development.  Dev Biol.  2010  340(1)  30-40  20096279  
Medaka    Tani S, Kusakabe R, Naruse K, Sakamoto H, Inoue K.  Genomic organization and embryonic expression of miR-430 in medaka (Oryzias latipes): insights into the post-transcriptional gene regulation in early development.  Gene..  2010  449(1-2)  41-9  19770025  
Medaka  Hd-rR  Tani S, Kusakabe R, Naruse K, Sakamoto H, Inoue K.  Genomic organization and embryonic expression of miR-430 in medaka (Oryzias latipes): insights into the post-transcriptional gene regulation in early development.  Gene..  2010  449(1-2)  41-9  19770025  
Medaka    Tsuda S, Kitagawa T, Takashima S, Asakawa S, Shimizu N, Mitani H, Shima A, Tsutsumi M, Hori H, Naruse K, Ishikawa Y, Takeda H.  FAK-mediated extracellular signals are essential for interkinetic nuclear migration and planar divisions in the neuroepithelium.  J Cell Sci..  2010  123(Pt 3)  484-96  20067997  
Medaka  NA  Anzai D, Tonoyama Y, Ikeda A, Kawasaki T, Oka S.  Regulated expression of the HNK-1 carbohydrate is essential for medaka (Oryzias latipes) embryogenesis.  Glycobiology..  2009  19(8)  868-78  19389918  
Medaka  孵化酵素  Deguchi T, Itoh M, Urawa H, Matsumoto T, Nakayama S, Kawasaki T, Kitano T, Oda S, Mitani H, Takahashi T, Todo T, Sato J, Okada K, Hatta K, Yuba S, Kamei Y.  Infrared laser-mediated local gene induction in medaka, zebrafish and Arabidopsis thaliana.  Dev Growth Differ..  2009  51(9)  769-75  19843153  
Medaka  STII-YI-Tg(...  Hano T, Oshima Y, Kinoshita M, Tanaka M, Wakamatsu Y, Ozato K, Nassef M, Shimasaki Y, Honjo T.  In ovo nanoinjection of nonylphenol affects embryonic development of a transgenic see-through medaka (Oryzias latipes), olvas-GFP/STII-YI strain.  Chemosphere..  2009  77(11)  1594-9  19853273  
Medaka  ?  Herpin A, Nakamura S, Wagner TU, Tanaka M, Schartl M.  A highly conserved cis-regulatory motif directs differential gonadal synexpression of Dmrt1 transcripts during gonad development.  Nucleic Acids Res.  2009  37(5)  1510-20  19139075  
Medaka  OK-Cab, a ...  Hibiya K, Katsumoto T, Kondo T, Kitabayashi I, Kudo A.  Brpf1, a subunit of the MOZ histone acetyl transferase complex, maintains expression of anterior and posterior Hox genes for proper patterning of craniofacial and caudal skeletons.  Dev Biol.  2009  329(2)  176-90  19254709  
Medaka  OK-Cab  Nakamura S, Kurokawa H, Asakawa S, Shimizu N, Tanaka M.  Two distinct types of theca cells in the medaka gonad: germ cell-dependent maintenance of cyp19a1-expressing theca cells.  Dev Dyn..  2009  238(10)  2652-7  19705448  
Medaka  Hd-rR?, HNI  Sasaki S, Mello CC, Shimada A, Nakatani Y, Hashimoto S, Ogawa M, Matsushima K, Gu SG, Kasahara M, Ahsan B, Sasaki A, Saito T, Suzuki Y, Sugano S, Kohara Y, Takeda H, Fire A, Morishita S.  Chromatin-associated periodicity in genetic variation downstream of transcriptional start sites.  Science.  2009  323(5912)  401-4  19074313  
Medaka  d-rR, cDNA ...  Suehiro Y, Yasuda A, Okuyama T, Imada H, Kuroyanagi Y, Kubo T, Takeuchi H.  Mass spectrometric map of neuropeptide expression and analysis of the gamma-prepro-tachykinin gene expression in the medaka (Oryzias latipes) brain.  Gen Comp Endocrinol..  2009  161(1)  138-45  19118555  
Medaka  cDNA  Tonoyama Y, Anzai D, Ikeda A, Kakuda S, Kinoshita M, Kawasaki T, Oka S.  Essential role of beta-1,4-galactosyltransferase 2 during medaka (Oryzias latipes) gastrulation.  Mech Dev.  2009  ()    19324086  
Medaka  ?  Wichian Magtoon, Aphichart Termvichakhron  A Revised Taxonomic Account of Ricefish Oryzias (Beloniformes; Adrianichthyidae), in Thailand, Indonesia and Japan.  The natural History Journal of　Chulalongkhron University  2009  9(1)  35-68   
Medaka  database  Ahsan B, Kobayashi D, Yamada T, Kasahara M, Sasaki S, Saito TL, Nagayasu Y, Doi K, Nakatani Y, Qu W, Jindo T, Shimada A, Naruse K, Toyoda A, Kuroki Y, Fujiyama A, Sasaki T, Shimizu A, Asakawa S, Shimizu N, Hashimoto S, Yang J, Lee Y, Matsushima K, Sugano S, Sakaizumi M, Narita T, Ohishi K, Haga S, Ohta F, Nomoto H, Nogata K, Morishita T, Endo T, Shin-I T, Takeda H, Kohara Y, Morishita S.  UTGB/medaka: genomic resource database for medaka biology.  Nucleic Acids Res.  2008  36(Database issue)  D747-52  17932069  
Medaka  database  Aoki Y, Nagao I, Saito D, Ebe Y, Kinjo M, Tanaka M.  Temporal and spatial localization of three germline-specific proteins in medaka.  Dev Dyn..  2008  237(3)  800-7  18224712  
Medaka  ?  Nagao I, Aoki Y, Tanaka M, Kinjo M.  Analysis of the molecular dynamics of medaka nuage proteins by fluorescence correlation spectroscopy and fluorescence recovery after photobleaching.  FEBS J..  2008  275(2)  341-9  18076648  
Medaka  OK-Cab?, tr...  Nakamura S, Aoki Y, Saito D, Kuroki Y, Fujiyama A, Naruse K, Tanaka M.  Sox9b/sox9a2-EGFP transgenic medaka reveals the morphological reorganization of the gonads and a common precursor of both the female and male supporting cells.  Mol Reprod Dev..  2008  75(3)  472-6  17474097  
Medaka  BAC clones  Nakamura S, Saito D, Tanaka M.  Generation of transgenic medaka using modified bacterial artificial chromosome.  Dev Growth Differ..  2008  50(6)  415-9  18422685  
Medaka  OK-Cab, Qur...  Nakatani Y, Nishidate M, Fujita M, Kawakami A, Kudo A.  Migration of mesenchymal cell fated to blastema is necessary for fish fin regeneration.  Dev Growth Differ..  2008  50(2)  71-83  18042247  
Medaka  OK-Cab?  Nemoto Y, Chatani M, Inohaya K, Hiraki Y, Kudo A.  Expression of marker genes during otolith development in medaka.  Gene Expr Patterns..  2008  8(2)  92-5  17981516  
Medaka  orange-red ...  Niimi G, Imada H.  Light and electron microscopic observation of presumptive erythropoietic foci in the medaka yolk sacs.  Ital J Anat Embryol..  2008  113(3)  153-8  19205587  
Medaka  orange-red....  Niimi G, Imada H.  Observation of non-nucleated erythrocytes in the peripheral blood of medaka, Oryzias latipes.  Okajimas Folia Anat Jpn..  2008  85(1)  1-3  18833905  
Medaka  ?  Omran H, Kobayashi D, Olbrich H, Tsukahara T, Loges NT, Hagiwara H, Zhang Q, Leblond G, O'Toole E, Hara C, Mizuno H, Kawano H, Fliegauf M, Yagi T, Koshida S, Miyawaki A, Zentgraf H, Seithe H, Reinhardt R, Watanabe Y, Kamiya R, Mitchell DR, Takeda H.  Ktu/PF13 is required for cytoplasmic pre-assembly of axonemal dyneins.  Nature.  2008  456(7222)  611-6  19052621  
Medaka  d-rR.YHNI /...  Pfennig F, Kind B, Zieschang F, Busch M, Gutzeit HO.  Tert expression and telomerase activity in gonads and somatic cells of the Japanese medaka (Oryzias latipes).  Dev Growth Differ..  2008  50(3)  131-41  18312429  
Medaka  039-25(ric1...  Aizawa K, Yori K, Kaminaga C, Yamashita T, Kinoshita M, Oda S, Mitani H.  Responses of embryonic germ cells of the radiation-sensitive Medaka mutant to gamma-irradiation.  J Radiat Res (Tokyo)..  2007  48(2)  121-8  17339749  
Medaka  Tg(ß-actin-...  Bubenshchikova E, Kaftanovskaya E, Motosugi N, Fujimoto T, Arai K, Kinoshita M, Hashimoto H, Ozato K, Wakamatsu Y.  Diploidized eggs reprogram adult somatic cell nuclei to pluripotency in nuclear transfer in medaka fish (Oryzias latipes).  Dev Growth Differ..  2007  49(9)  699-709  17868280  
Medaka  NA  Hano T, Oshima Y, Kinoshita M, Tanaka M, Mishima N, Ohyama T, Yanagawa T, Wakamatsu Y, Ozato K, Honjo T.  Quantitative bioimaging analysis of gonads in olvas-GFP/ST-II YI Medaka (transgenic Oryzias latipes) exposed to ethinylestradiol.  Environ Sci Technol..  2007  41(4)  1473-9  17593759  
Medaka  STII  Hardman, RC., Kullman, SW., Hinton, DE.  Application of in vivo methodologies to investigation of biological structure, function and xenobiotic response in see-through medaka (Oryzias latipes)  J. Fish Biol. Medaka  2007  11  43-65   
Medaka  BAC library...  Inohaya K, Takano Y, Kudo A.  The teleost intervertebral region acts as a growth center of the centrum: in vivo visualization of osteoblasts and their progenitors in transgenic fish.  Dev Dyn..  2007  236(11)  3031-46  17907202  
Medaka  NA  Ishikawa Y, Yamamoto N, Yoshimoto M, Yasuda T, Maruyama K, Kage T, Takeda H, Ito H.  Developmental origin of diencephalic sensory relay nuclei in teleosts.  Brain Behav Evol..  2007  69(2)  87-95  17230016  
Medaka  HO4C  Ishikawa, Y., Yasuda, T., Maeda, K., Matsumoto, A., Maruyama, K.  Apoptosis in neural tube during normal development of medaka.  J. Fish Biol. Medaka  2007  11  23-30   
Medaka  NA  Ito H, Ishikawa Y, Yoshimoto M, Yamamoto N.  Diversity of brain morphology in teleosts: brain and ecological niche.  Brain Behav Evol..  2007  69(2)  76-86  17230015  
Medaka  ?  Kaftanovskaya E, Motosugi N, Kinoshita M, Ozato K, Wakamatsu Y.  Ploidy mosaicism in well-developed nuclear transplants produced by transfer of adult somatic cell nuclei to nonenucleated eggs of medaka (Oryzias latipes).  Dev Growth Differ..  2007  49(9)  691-8  17868281  
Medaka  Cab系統 O. c...  Kamei Y, Itou J, Oda S, Masui M, Kim JH, Ishikawa T, Yuba S, Kinoshita M, Mitani H, Todo T.  Development of a convenient in vitro fertilization method using interspecific hybrids between Oryzias latipes and Oryzias curvinotus.  Dev Growth Differ..  2007  49(9)  721-30  17983366  
Medaka  Hd-rR?, HNI...  Kasahara M, Naruse K, Sasaki S, Nakatani Y, Qu W, Ahsan B, Yamada T, Nagayasu Y, Doi K, Kasai Y, Jindo T, Kobayashi D, Shimada A, Toyoda A, Kuroki Y, Fujiyama A, Sasaki T, Shimizu A, Asakawa S, Shimizu N, Hashimoto S, Yang J, Lee Y, Matsushima K, Sugano S, Sakaizumi M, Narita T, Ohishi K, Haga S, Ohta F, Nomoto H, Nogata K, Morishita T, Endo T, Shin-I T, Takeda H, Morishita S, Kohara Y.  The medaka draft genome and insights into vertebrate genome evolution.  Nature.  2007  447(7145)  714-9  17554307  
Medaka  STII?  Kashiwada S, Goka K, Shiraishi H, Arizono K, Ozato K, Wakamatsu Y, Hinton DE.  Age-dependent in situ hepatic and gill CYP1A activity in the see-through medaka (Oryzias latipes).  Comp Biochem Physiol C Toxicol Pharmacol..  2007  145(1)  96-102  16914386  
Medaka  HNI -II?, ...  Kimura T, Shimada A, Sakai N, Mitani H, Naruse K, Takeda H, Inoko H, Tamiya G, Shinya M.  Genetic analysis of craniofacial traits in the medaka.  Genetics.  2007  177(4)  2379-88  18073435  
Medaka  d-rR, Hd-rR...  Klüver N, Pfennig F, Pala I, Storch K, Schlieder M, Froschauer A, Gutzeit HO, Schartl M.  Differential expression of anti-Müllerian hormone (amh) and anti-Müllerian hormone receptor type II (amhrII) in the teleost medaka.  Dev Dyn..  2007  236(1)  271-81  17075875  
Medaka  OK-Cab?  Kurokawa H, Saito D, Nakamura S, Katoh-Fukui Y, Ohta K, Baba T, Morohashi K, Tanaka M.  Germ cells are essential for sexual dimorphism in the medaka gonad.  Proc Natl Acad Sci U S A.  2007  104(43)  16958-63  17940041  
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