RRC ID 15919
著者 Woo SG, Ten LN, Park J, Lee M.
タイトル Ochrobactrum daejeonense sp. nov., a nitrate-reducing bacterium isolated from sludge of a leachate treatment plant.
ジャーナル Int J Syst Evol Microbiol
Abstract A Gram-reaction-negative, non-spore-forming, rod-shaped, aerobic bacterial strain, designated MJ11(T), was isolated from sludge of a leachate treatment plant in Daejeon, South Korea, and was characterized taxonomically by using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that strain MJ11(T) belonged to the family Brucellaceae, class Alphaproteobacteria, and was most closely related to Ochrobactrum ciceri Ca-34(T) (97.9 % sequence similarity) and Ochrobactrum pituitosum CCUG 50899(T) (96.4 %). Comparative sequence analyses of the additional phylogenetic marker genes dnaK, groEL and gyrB confirmed the affiliation of strain MJ11(T) to the genus Ochrobactrum. The G+C content of the genomic DNA of strain MJ11(T) was 59.3 mol%. The detection of a quinone system with ubiquinone Q-10 as the predominant respiratory lipoquinone, a fatty acid profile with C(18 : 1)ω7c (62.6 %) and C(19 : 0) cyclo ω8c (14.2 %) as the major components, a polar lipid profile with phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine, phosphatidylmonomethylethanolamine, diphosphatidylglycerol and unknown aminolipids AL1 and AL2 as major polar lipids and spermidine and putrescine as the predominant polyamines also supported the affiliation of strain MJ11(T) to the genus Ochrobactrum. The DNA-DNA relatedness between strain MJ11(T) and Ochrobactrum ciceri DSM 22292(T) was 29 ± 7 %, clearly showing that the isolate constitutes a new genospecies. Strain MJ11(T) could be clearly differentiated from its closest neighbours on the basis of its phenotypic, genotypic and chemotaxonomic features. Therefore, strain MJ11(T) represents a novel species of the genus Ochrobactrum, for which the name Ochrobactrum daejeonense sp. nov. is proposed. The type strain is MJ11(T) ( = KCTC 22458(T) = JCM 16234(T)).
巻・号 61(Pt 11)
ページ 2690-2696
公開日 2011-11-1
DOI 10.1099/ijs.0.025510-0
PMID 21169456
MeSH Base Composition DNA, Bacterial / genetics DNA, Ribosomal / genetics Fatty Acids / metabolism Molecular Sequence Data Nitrates / metabolism* Ochrobactrum / classification* Ochrobactrum / genetics Ochrobactrum / isolation & purification* Ochrobactrum / metabolism Oxidation-Reduction Phylogeny RNA, Ribosomal, 16S / genetics Republic of Korea Sewage / microbiology* Waste Disposal, Fluid
IF 2.415
引用数 14
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 16234