RRC ID 27609
著者 Jin L, Lee HG, Kim HS, Ahn CY, Oh HM.
タイトル Geodermatophilus soli sp. nov. and Geodermatophilus terrae sp. nov., two actinobacteria isolated from grass soil.
ジャーナル Int J Syst Evol Microbiol
Abstract Two strains, PB34(T) and PB261(T), were isolated from grass soil sampled in Daejeon, Republic of Korea. Comparative 16S rRNA gene sequence studies showed the two bacteria to be clearly affiliated with the phylum Actinobacteria and most closely related to the genus Geodermatophilus, showing 16S rRNA gene sequence similarities to the type strains of species of the genus Geodermatophilus of 95.0-96.3 % and sharing 98.5 % similarity between the two strains. The two strains were Gram-stain-positive, aerobic, motile and rod-shaped bacteria. The peptidoglycan contained meso-diaminopimelic acid as the diagnostic diamino acid. The predominant menaquinones were MK-9(H4) and MK-9(H0). The major fatty acids were iso-C15 : 0, iso-C16 : 0, iso-C17 : 0 and summed feature 3 (C16 : 1ω7c and/or C16 : 1ω6c) for strain PB34(T) and iso-C14 : 0, iso-C15 : 0, iso-C16 : 0 and C16 : 0 for strain PB261(T). The G+C contents of the genomic DNA of strains PB34(T) and PB261(T) were 73.2 mol% and 74.1 mol%, respectively. Thus, based on the evidence of a polyphasic study, it is proposed that strains PB34(T) and PB261(T) represent two novel species, for which the names Geodermatophilus soli sp. nov. (type strain PB34(T) = KCTC 19880(T) = JCM 17785(T)) and Geodermatophilus terrae sp. nov. (type strain PB261(T) = KCTC 19881(T) = JCM 17786(T)) are proposed.
巻・号 63(Pt 7)
ページ 2625-2629
公開日 2013-7-1
DOI 10.1099/ijs.0.048892-0
PMID 23264505
MeSH Actinomycetales / classification* Actinomycetales / genetics Actinomycetales / isolation & purification Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Diaminopimelic Acid / analysis Fatty Acids / analysis Molecular Sequence Data Phylogeny* Poaceae / microbiology RNA, Ribosomal, 16S / genetics Republic of Korea Sequence Analysis, DNA Soil Microbiology* Vitamin K 2 / analogs & derivatives Vitamin K 2 / analysis
IF 2.415
引用数 17
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 17785 JCM 17786 JCM 18056