RRC ID 58787
著者 Morita S, Horii T, Kimura M, Hatada I.
タイトル Synergistic Upregulation of Target Genes by TET1 and VP64 in the dCas9-SunTag Platform.
ジャーナル Int J Mol Sci
Abstract Overexpression of a gene of interest is a general approach used in both basic research and therapeutic applications. However, the conventional approach involving overexpression of exogenous genes has difficulty achieving complete genome coverage, and is also limited by the cloning capacity of viral vectors. Therefore, an alternative approach would be to drive the expression of an endogenous gene using an artificial transcriptional activator. Fusion proteins of dCas9 and a transcription activation domain, such as dCas9-VP64, are widely used for activation of endogenous genes. However, when using a single sgRNA, the activation range is low. Consequently, tiling of several sgRNAs is required for robust transcriptional activation. Here we describe the screening of factors that exhibit the best synergistic activation of gene expression with TET1 in the dCas9-SunTag format. All seven factors examined showed some synergy with TET1. Among them, VP64 gave the best results. Thus, simultaneous tethering of VP64 and TET1 to a target gene using an optimized dCas9-SunTag format synergistically activates gene expression using a single sgRNA.
巻・号 21(5)
公開日 2020-2-25
DOI 10.3390/ijms21051574
PII ijms21051574
PMID 32106616
PMC PMC7084704
MeSH A549 Cells Basic-Leucine Zipper Transcription Factors / genetics Basic-Leucine Zipper Transcription Factors / metabolism CRISPR-Associated Protein 9 / genetics CRISPR-Associated Protein 9 / metabolism CRISPR-Cas Systems* Genetic Engineering / methods* Humans Mixed Function Oxygenases / genetics Mixed Function Oxygenases / metabolism Promoter Regions, Genetic Proto-Oncogene Proteins / genetics Proto-Oncogene Proteins / metabolism RNA, Guide, Kinetoplastida / genetics RNA, Guide, Kinetoplastida / metabolism Single-Chain Antibodies / genetics Single-Chain Antibodies / metabolism Up-Regulation*
IF 4.556
引用数 0
リソース情報
ヒト・動物細胞 A549(RCB0098)