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Species Resource name RRC ID Author Title Journal Published Volume Pages Pubmed ID DOI
Arabidopsis / Cultured plant cells, genes   SJA02900   48581   Ariga H, Katori T, Tsuchimatsu T, Hirase T, Tajima Y, Parker JE, Alcázar R, Koornneef M, Hoekenga O, Lipka AE, Gore MA, Sakakibara H, Kojima M, Kobayashi Y, Iuchi S, Kobayashi M, Shinozaki K, Sakata Y, Hayashi T, Saijo Y, Taji T.   NLR locus-mediated trade-off between abiotic and biotic stress adaptation in Arabidopsis.   Nat Plants   2017 -5 -27   3   17072   28548656   10.1038/nplants.2017.72  
Arabidopsis / Cultured plant cells, genes   rpc00008   48783   Arae T, Isai S, Sakai A, Mineta K, Yokota Hirai M, Suzuki Y, Kanaya S, Yamaguchi J, Naito S, Chiba Y.   Co-ordinated Regulations of mRNA Synthesis and Decay during Cold Acclimation in Arabidopsis Cells.   Plant Cell Physiol.   2017 -4 -27   58(6)   1090-1102   28444357   10.1093/pcp/pcx059  
Arabidopsis / Cultured plant cells, genes   rpc00001   48774   Kurita K, Sakamoto T, Yagi N, Sakamoto Y, Ito A, Nishino N, Sako K, Yoshida M, Kimura H, Seki M, Matsunaga S.   Live imaging of H3K9 acetylation in plant cells.   Sci Rep   2017 -4 -19   7   45894   28418019   10.1038/srep45894  
Arabidopsis / Cultured plant cells, genes   rpc00008   48768   Kobayashi A, Miura S, Kozaki A.   INDETERMINATE DOMAIN PROTEIN binding sequences in the 5'-untranslated region and promoter of the SCARECROW gene play crucial and distinct roles in regulating SCARECROW expression in roots and leaves.   Plant Mol. Biol.   2017 -3 -23   94(1-2)   1-13   28324206   10.1007/s11103-016-0578-0  
Arabidopsis / Cultured plant cells, genes   pda00237, pda00582, pda02412, pda02449,...   48793   H. M. Mamrutha, K. N. Nataraja, N. Rama, D. K. Kosma, T. Mogili, K. Jhansi Lakshmi, M. Udaya Kumar, M. A. Jenks   Leaf surface wax composition of genetically diverse mulberry (Morus sp.) genotypes and its close association with expressin of genes involved in wax metabolism.   Scientific Report   2017 -02 -25   112(4)   759-766     10.18520/cs/v112/i04/759-766  
Arabidopsis / Cultured plant cells, genes   pst18218   48770   Tschopp MA, Iki T, Brosnan CA, Jullien PE, Pumplin N.   A complex of Arabidopsis DRB proteins can impair dsRNA processing.   RNA   2017 -2 -25   23(5)   782-797   28232389   10.1261/rna.059519.116  
Arabidopsis / Cultured plant cells, genes   pst13645   48771   Denis E, Kbiri N, Mary V, Claisse G, Conde E Silva N, Kreis M, Deveaux Y.   WOX14 promotes bioactive gibberellin synthesis and vascular cell differentiation in Arabidopsis.   Plant J.   2017 -2 -22   90(3)   560-572   28218997   10.1111/tpj.13513  
Arabidopsis / Cultured plant cells, genes   pda08270, pda04699   48580   Hirano Y, Nakagawa M, Suyama T, Murase K, Shirakawa M, Takayama S, Sun TP, Hakoshima T.   Structure of the SHR-SCR heterodimer bound to the BIRD/IDD transcriptional factor JKD.   Nat Plants   2017 -2 -18   3   17010   28211915   10.1038/nplants.2017.10  
Arabidopsis / Cultured plant cells, genes   psi00016, psi00017   48766   Wang X, Li J, Ban L, Wu Y, Wu X, Wang Y, Wen H, Chapurin V, Dzyubenko N, Li Z, Wang Z, Gao H.   Functional characterization of a gibberellin receptor and its application in alfalfa biomass improvement.   Sci Rep   2017 -1 -28   7   41296   28128230   10.1038/srep41296  
Arabidopsis / Cultured plant cells, genes   pda10975, pda02804, pda06312, pda12960,...   48773   Bremer A, Wolff M, Thalhammer A, Hincha DK.   Folding of intrinsically disordered plant LEA proteins is driven by glycerol-induced crowding and the presence of membranes.   FEBS J.   2017 -1 -22   284(6)   919-936   28109185   10.1111/febs.14023  
Arabidopsis / Cultured plant cells, genes   psw00001   48747   Kakizaki T, Kitashiba H, Zou Z, Li F, Fukino N, Ohara T, Nishio T, Ishida M.   A 2-Oxoglutarate-Dependent Dioxygenase Mediates the Biosynthesis of Glucoraphasatin in Radish.   Plant Physiol.   2017 -1 -20   173(3)   1583-1593   28100450   10.1104/pp.16.01814  
Arabidopsis / Cultured plant cells, genes   pdx82318   48720   Rahier R, Noiriel A, Abousalham A.   Functional Characterization of the N-Terminal C2 Domain from Arabidopsis thaliana Phospholipase Dα and Dβ.   Biomed Res Int   2017 -1 -20   2016   2721719   28101506   10.1155/2016/2721719  
Arabidopsis / Cultured plant cells, genes   pda18258   48575   Hocq L, Sénéchal F, Lefebvre V, Lehner A, Domon JM, Mollet JC, Dehors J, Pageau K, Marcelo P, Guérineau F, Kolšek K, Mercadante D, Pelloux J.   Combined Experimental and Computational Approaches Reveal Distinct pH Dependence of Pectin Methylesterase Inhibitors.   Plant Physiol.   2016 -12 -31   173(2)   1075-1093   28034952   10.1104/pp.16.01790  
Arabidopsis / Cultured plant cells, genes   pst00121, pst15134   48761   Wang L, Li Q, Zhang A, Zhou W, Jiang R, Yang Z, Yang H, Qin X, Ding S, Lu Q, Wen X, Lu C.   The Phytol Phosphorylation Pathway Is Essential for the Biosynthesis of Phylloquinone, which Is Required for Photosystem I Stability in Arabidopsis.   Mol Plant   2016 -12 -23   10(1)   183-196   28007557   10.1016/j.molp.2016.12.006  
Arabidopsis / Cultured plant cells, genes   pst14354   48573   Sampedro J, Valdivia ER, Fraga P, Iglesias N, Revilla G, Zarra I.   Soluble and Membrane-Bound β-Glucosidases Are Involved in Trimming the Xyloglucan Backbone.   Plant Physiol.   2016 -12 -14   173(2)   1017-1030   27956490   10.1104/pp.16.01713  
Arabidopsis / Cultured plant cells, genes   pda10539, pda15497   48767   Wang Q, Jia M, Huh JH, Muchlinski A, Peters RJ, Tholl D.   Identification of a Dolabellane Type Diterpene Synthase and other Root-Expressed Diterpene Synthases in Arabidopsis.   Front Plant Sci   2016 -12 -10   7   1761   27933080   10.3389/fpls.2016.01761  
Arabidopsis / Cultured plant cells, genes   pst15755   48769   Uhrig RG, Labandera AM, Tang LY, Sieben NA, Goudreault M, Yeung E, Gingras AC, Samuel MA, Moorhead GB.   Activation of Mitochondrial Protein Phosphatase SLP2 by MIA40 Regulates Seed Germination.   Plant Physiol.   2016 -12 -8   173(2)   956-969   27923987   10.1104/pp.16.01641  
Arabidopsis / Cultured plant cells, genes   pda12225, pda04013   48751   Vu KV, Nguyen NT, Jeong CY, Lee YH, Lee H, Hong SW.   Systematic deletion of the ER lectin chaperone genes reveals their roles in vegetative growth and male gametophyte development in Arabidopsis.   Plant J.   2016 -11 -27   89(5)   972-983   27888524   10.1111/tpj.13435  
Arabidopsis / Cultured plant cells, genes   rpc00001   48760   Kimura S, Kawano T, Iwasaki T.   Short polyhistidine peptides penetrate effectively into Nicotiana tabacum-cultured cells and Saccharomyces cerevisiae cells.   Biosci. Biotechnol. Biochem.   2016 -11 -26   81(1)   112-118   27885926   10.1080/09168451.2016.1234925  
Arabidopsis / Cultured plant cells, genes   psb00001   48792   Tombuloglu, Huseyin; Filiz, Ertugrul; Aydyn, Mehtap; Koc, Ibrahim   Genome-wide identification and expression analysis of sulphate transporter (SULTR) genes under sulfur deficiency in Brachypodium distachyon.   J Plant Biochem Biotechnol.   2016 -11 -14         10.1007/s13562-016-0388-0  
Arabidopsis / Cultured plant cells, genes   pss10000   48748   Wang M, Jiang L, Da Q, Liu J, Feng D, Wang J, Wang HB, Jin HL.   DELAYED GREENING 238, a Nuclear-Encoded Chloroplast Nucleoid Protein, Is Involved in the Regulation of Early Chloroplast Development and Plastid Gene Expression in Arabidopsis thaliana.   Plant Cell Physiol.   2016 -11 -8   57(12)   2586-2599   27818379   10.1093/pcp/pcw172  
Arabidopsis / Cultured plant cells, genes   pst05666   48574   Cui Y, Zhao Q, Xie HT, Wong WS, Wang X, Gao C, Ding Y, Tan Y, Ueda T, Zhang Y, Jiang L.   MONENSIN SENSITIVITY1 (MON1)/CALCIUM CAFFEINE ZINC SENSITIVITY1 (CCZ1)-Mediated Rab7 Activation Regulates Tapetal Programmed Cell Death and Pollen Development.   Plant Physiol.   2016 -11 -2   173(1)   206-218   27799422   10.1104/pp.16.00988  
Arabidopsis / Cultured plant cells, genes   pda08192   48577   Moneo-Sánchez M, Izquierdo L, Martín I, Labrador E, Dopico B.   Subcellular location of Arabidopsis thaliana subfamily a1 β-galactosidases and developmental regulation of transcript levels of their coding genes.   Plant Physiol. Biochem.   2016 -9 -28   109   137-145   27676245   10.1016/j.plaphy.2016.09.016  
Arabidopsis / Cultured plant cells, genes   pda06002   48576   Hauenstein M, Christ B, Das A, Aubry S, Hörtensteiner S.   A Role for TIC55 as a Hydroxylase of Phyllobilins, the Products of Chlorophyll Breakdown during Plant Senescence.   Plant Cell   2016 -9 -23   28(10)   2510-2527   27655840   10.1105/tpc.16.00630  
Arabidopsis / Cultured plant cells, genes   psx20310, psx20788   48759   Chu HD, Le QN, Nguyen HQ, Le DT.   Genome-Wide Analysis of Genes Encoding Methionine-Rich Proteins in Arabidopsis and Soybean Suggesting Their Roles in the Adaptation of Plants to Abiotic Stress.   Int J Genomics   2016 -9 -17   2016   5427062   27635394   10.1155/2016/5427062  
Arabidopsis / Cultured plant cells, genes   pda00454, pda08662   48762   Tang Y, Zhao CY, Tan ST, Xue HW.   Arabidopsis Type II Phosphatidylinositol 4-Kinase PI4Kγ5 Regulates Auxin Biosynthesis and Leaf Margin Development through Interacting with Membrane-Bound Transcription Factor ANAC078.   PLoS Genet.   2016 -8 -17   12(8)   e1006252   27529511   10.1371/journal.pgen.1006252  
Arabidopsis / Cultured plant cells, genes   rpc00041   48578   Nambo M, Kurihara D, Yamada T, Nishiwaki-Ohkawa T, Kadofusa N, Kimata Y, Kuwata K, Umeda M, Ueda M.   Combination of Synthetic Chemistry and Live-Cell Imaging Identified a Rapid Cell Division Inhibitor in Tobacco and Arabidopsis thaliana.   Plant Cell Physiol.   2016 -8 -16   57(11)   2255-2268   27519314   10.1093/pcp/pcw140  
Arabidopsis / Cultured plant cells, genes   pst15850   48719   Weimer AK, Biedermann S, Harashima H, Roodbarkelari F, Takahashi N, Foreman J, Guan Y, Pochon G, Heese M, Van Damme D, Sugimoto K, Koncz C, Doerner P, Umeda M, Schnittger A.   The plant-specific CDKB1-CYCB1 complex mediates homologous recombination repair in Arabidopsis.   EMBO J.   2016 -8 -9   35(19)   2068-2086   27497297   10.15252/embj.201593083  
Arabidopsis / Cultured plant cells, genes   sja05800   38865   Fukuda M, Segami S, Tomoyama T, Asaoka M, Nakanishi Y, Gunji S, Ferjani A, Maeshima M.   Lack of H(+)-pyrophosphatase Prompts Developmental Damage in Arabidopsis Leaves on Ammonia-Free Culture Medium.   Front Plant Sci   2016 -7 -5   7   819   27375667   10.3389/fpls.2016.00819  
Arabidopsis / Cultured plant cells, genes   pda09144   48563   Huang L, Khusnutdinova A, Nocek B, Brown G, Xu X, Cui H, Petit P, Flick R, Zallot R, Balmant K, Ziemak MJ, Shanklin J, de Crécy-Lagard V, Fiehn O, Gregory JF 3rd, Joachimiak A, Savchenko A, Yakunin AF, Hanson AD.   A family of metal-dependent phosphatases implicated in metabolite damage-control.   Nat. Chem. Biol.   2016 -6 -21   12(8)   621-7   27322068   10.1038/nchembio.2108  
Arabidopsis / Cultured plant cells, genes   pda19394, pda09911   48789   Feike D, Seung D, Graf A, Bischof S, Ellick T, Coiro M, Soyk S, Eicke S, Mettler-Altmann T, Lu KJ, Trick M, Zeeman SC, Smith AM.   The Starch Granule-Associated Protein EARLY STARVATION1 Is Required for the Control of Starch Degradation in Arabidopsis thaliana Leaves.   Plant Cell   2016 -5 -22   28(6)   1472-89   27207856   10.1105/tpc.16.00011  
Arabidopsis / Cultured plant cells, genes   pda00682   38866   van Roermund CW, Schroers MG, Wiese J, Facchinelli F, Kurz S, Wilkinson S, Charton L, Wanders RJ, Waterham HR, Weber AP, Link N.   The Peroxisomal NAD Carrier from Arabidopsis Imports NAD in Exchange with AMP.   Plant Physiol.   2016 -5 -22   171(3)   2127-39   27208243   10.1104/pp.16.00540  
Arabidopsis / Cultured plant cells, genes   pda2153   36895   Lin TF, Saiga S, Abe M, Laux T.   OBE3 and WUS Interaction in Shoot Meristem Stem Cell Regulation.   PLoS ONE   2016 -5 -20   11(5)   e0155657   27196372   10.1371/journal.pone.0155657  
Arabidopsis / Cultured plant cells, genes   pst   48775   Petridis A, Döll S, Nichelmann L, Bilger W, Mock HP.   Arabidopsis thaliana G2-LIKE FLAVONOID REGULATOR and BRASSINOSTEROID ENHANCED EXPRESSION1 are low-temperature regulators of flavonoid accumulation.   New Phytol.   2016 -4 -30   211(3)   912-25   27125220   10.1111/nph.13986  
Arabidopsis / Cultured plant cells, genes   pda07290, pda18567, pda02895, pda08364,...   36738   Francoz E, Ranocha P, Pernot C, Le Ru A, Pacquit V, Dunand C, Burlat V.   Complementarity of medium-throughput in situ RNA hybridization and tissue-specific transcriptomics: case study of Arabidopsis seed development kinetics.   Sci Rep   2016 -4 -21   6   24644   27095274   10.1038/srep24644  
Arabidopsis / Cultured plant cells, genes   pda07685   36739   Nakamoto T, Miyanokoshi M, Tanaka T, Wakasugi K.   Identification of a residue crucial for the angiostatic activity of human mini tryptophanyl-tRNA synthetase by focusing on its molecular evolution.   Sci Rep   2016 -4 -21   6   24750   27094087   10.1038/srep24750  
Arabidopsis / Cultured plant cells, genes   sja05800   36740   Asaoka MM, Segami S, Ferjani A, Maeshima M.   Contribution of PPi-Hydrolyzing Function of Vacuolar H(+)-Pyrophosphatase in Vegetative Growth of Arabidopsis: Evidenced by Expression of Uncoupling Mutated Enzymes.   Front Plant Sci   2016 -4 -12   7   415   27066051   10.3389/fpls.2016.00415  
Arabidopsis / Cultured plant cells, genes   pda02452, pda06461   48750   Ge Y, Cai YM, Bonneau L, Rotari V, Danon A, McKenzie EA, McLellan H, Mach L, Gallois P.   Inhibition of cathepsin B by caspase-3 inhibitors blocks programmed cell death in Arabidopsis.   Cell Death Differ.   2016 -4 -9   23(9)   1493-501   27058316   10.1038/cdd.2016.34  
Arabidopsis / Cultured plant cells, genes   pda13118   48790   Oh K, Matsumoto T, Hoshi T, Yoshizawa Y.   In vitro and in vivo evidence for the inhibition of brassinosteroid synthesis by propiconazole through interference with side chain hydroxylation.   Plant Signal Behav   2016 -3 -18   11(5)   e1158372   26987039   10.1080/15592324.2016.1158372  
Arabidopsis / Cultured plant cells, genes   rpc00031   36741   Toda E, Ohnishi Y, Okamoto T.   Development of Polyspermic Rice Zygotes.   Plant Physiol.   2016 -3 -6   171(1)   206-14   26945052   10.1104/pp.15.01953  
Arabidopsis / Cultured plant cells, genes   pst12013   36893   Clavel M, Pélissier T, Montavon T, Tschopp MA, Pouch-Pélissier MN, Descombin J, Jean V, Dunoyer P, Bousquet-Antonelli C, Deragon JM.   Evolutionary history of double-stranded RNA binding proteins in plants: identification of new cofactors involved in easiRNA biogenesis.   Plant Mol. Biol.   2016 -2 -10   91(1-2)   131-47   26858002   10.1007/s11103-016-0448-9  
Arabidopsis / Cultured plant cells, genes   pda02865   36796   Pariani S, Contreras M, Rossi FR, Sander V, Corigliano MG, Simón F, Busi MV, Gomez-Casati DF, Pieckenstain FL, Duschak VG, Clemente M.   Characterization of a novel Kazal-type serine proteinase inhibitor of Arabidopsis thaliana.   Biochimie   2016 -2 -9   123   85-94   26853817   10.1016/j.biochi.2016.02.002  
Arabidopsis / Cultured plant cells, genes   psb00001   36748   Matsumura T, Okamoto T   Isolation of gametes from Brachypodium distachyon.   Plant Biotechnology.   2016 -1 -23   33   39-43     10.5511/plantbiotechnology.16.0123a  
Arabidopsis / Cultured plant cells, genes   psb00001   48791   Tombuloglu H, Ablazov A, Filiz E.   Genome-wide analysis of response to low sulfur (LSU) genes in grass species and expression profiling of model grass species Brachypodium distachyon under S deficiency.   Turkish J Biol.   2016 -01 -21   40   934-943     10.3906/biy-1508-32  
Arabidopsis / Cultured plant cells, genes   pst20518   48718   Pereira AM, Nobre MS, Pinto SC, Lopes AL, Costa ML, Masiero S, Coimbra S.   "Love Is Strong, and You're so Sweet": JAGGER Is Essential for Persistent Synergid Degeneration and Polytubey Block in Arabidopsis thaliana.   Mol Plant   2016 -1 -18   9(4)   601-14   26774620   10.1016/j.molp.2016.01.002  
Arabidopsis / Cultured plant cells, genes   pda02854, pda02010   36742   Gramegna G, Modesti V, Savatin DV, Sicilia F, Cervone F, De Lorenzo G.   GRP-3 and KAPP, encoding interactors of WAK1, negatively affect defense responses induced by oligogalacturonides and local response to wounding.   J. Exp. Bot.   2016 -1 -10   67(6)   1715-29   26748394   10.1093/jxb/erv563  
Arabidopsis / Cultured plant cells, genes   pda10994   36894   Khatib A, Arhab Y, Bentebibel A, Abousalham A, Noiriel A.   Reassessing the Potential Activities of Plant CGI-58 Protein.   PLoS ONE   2016 -1 -9   11(1)   e0145806   26745266   10.1371/journal.pone.0145806  
Arabidopsis / Cultured plant cells, genes   pst15793, pst16212   36743   Uhrig RG, Labandera AM, Muhammad J, Samuel M, Moorhead GB.   Rhizobiales-like Phosphatase 2 from Arabidopsis thaliana Is a Novel Phospho-tyrosine-specific Phospho-protein Phosphatase (PPP) Family Protein Phosphatase.   J. Biol. Chem.   2016 -1 -9   291(11)   5926-34   26742850   10.1074/jbc.M115.683656  
Arabidopsis / Cultured plant cells, genes   pda01627, pda09678, pda11283   36929   Basu D, Tian L, Wang W, Bobbs S, Herock H, Travers A, Showalter AM.   A small multigene hydroxyproline-O-galactosyltransferase family functions in arabinogalactan-protein glycosylation, growth and development in Arabidopsis.   BMC Plant Biol.   2015 -12 -23   15   295   26690932   10.1186/s12870-015-0670-7  
Arabidopsis / Cultured plant cells, genes   pst13573   48579   Suorsa M, Rossi F, Tadini L, Labs M, Colombo M, Jahns P, Kater MM, Leister D, Finazzi G, Aro EM, Barbato R, Pesaresi P.   PGR5-PGRL1-Dependent Cyclic Electron Transport Modulates Linear Electron Transport Rate in Arabidopsis thaliana.   Mol Plant   2015 -12 -22   9(2)   271-288   26687812   10.1016/j.molp.2015.12.001  
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