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Species Resource name RRC ID Author Title Journal Published Volume Pages Pubmed ID DOI
Arabidopsis / Cultured plant cells, genes   sja05800   38865   Fukuda M, Segami S, Tomoyama T, Asaoka M, Nakanishi Y, Gunji S, Ferjani A, Maeshima M.   Lack of H(+)-pyrophosphatase Prompts Developmental Damage in Arabidopsis Leaves on Ammonia-Free Culture Medium.   Front Plant Sci   2016 -7 -5   7   819   27375667   10.3389/fpls.2016.00819  
Arabidopsis / Cultured plant cells, genes   pda00682   38866   van Roermund CW, Schroers MG, Wiese J, Facchinelli F, Kurz S, Wilkinson S, Charton L, Wanders RJ, Waterham HR, Weber AP, Link N.   The Peroxisomal NAD Carrier from Arabidopsis Imports NAD in Exchange with AMP.   Plant Physiol.   2016 -5 -22   171(3)   2127-39   27208243   10.1104/pp.16.00540  
Arabidopsis / Cultured plant cells, genes   pda2153   36895   Lin TF, Saiga S, Abe M, Laux T.   OBE3 and WUS Interaction in Shoot Meristem Stem Cell Regulation.   PLoS ONE   2016 -5 -20   11(5)   e0155657   27196372   10.1371/journal.pone.0155657  
Arabidopsis / Cultured plant cells, genes   pda07290, pda18567, pda02895, pda08364, pda02336...   36738   Francoz E, Ranocha P, Pernot C, Le Ru A, Pacquit V, Dunand C, Burlat V.   Complementarity of medium-throughput in situ RNA hybridization and tissue-specific transcriptomics: case study of Arabidopsis seed development kinetics.   Sci Rep   2016 -4 -21   6   24644   27095274   10.1038/srep24644  
Arabidopsis / Cultured plant cells, genes   pda07685   36739   Nakamoto T, Miyanokoshi M, Tanaka T, Wakasugi K.   Identification of a residue crucial for the angiostatic activity of human mini tryptophanyl-tRNA synthetase by focusing on its molecular evolution.   Sci Rep   2016 -4 -21   6   24750   27094087   10.1038/srep24750  
Arabidopsis / Cultured plant cells, genes   sja05800   36740   Asaoka MM, Segami S, Ferjani A, Maeshima M.   Contribution of PPi-Hydrolyzing Function of Vacuolar H(+)-Pyrophosphatase in Vegetative Growth of Arabidopsis: Evidenced by Expression of Uncoupling Mutated Enzymes.   Front Plant Sci   2016 -4 -12   7   415   27066051   10.3389/fpls.2016.00415  
Arabidopsis / Cultured plant cells, genes   pst15793, pst16212   36743   Uhrig RG, Labandera AM, Muhammad J, Samuel M, Moorhead GB.   Rhizobiales-like Phosphatase 2 from Arabidopsis thaliana Is a Novel Phospho-tyrosine-specific Phospho-protein Phosphatase (PPP) Family Protein Phosphatase.   J. Biol. Chem.   2016 -3 -11   291(11)   5926-34   26742850   10.1074/jbc.M115.683656  
Arabidopsis / Cultured plant cells, genes   rpc00031   36741   Toda E, Ohnishi Y, Okamoto T.   Development of Polyspermic Rice Zygotes.   Plant Physiol.   2016 -3 -6   171(1)   206-14   26945052   10.1104/pp.15.01953  
Arabidopsis / Cultured plant cells, genes   pst12013   36893   Clavel M, Pélissier T, Montavon T, Tschopp MA, Pouch-Pélissier MN, Descombin J, Jean V, Dunoyer P, Bousquet-Antonelli C, Deragon JM.   Evolutionary history of double-stranded RNA binding proteins in plants: identification of new cofactors involved in easiRNA biogenesis.   Plant Mol. Biol.   2016 -2 -10   91(1-2)   131-47   26858002   10.1007/s11103-016-0448-9  
Arabidopsis / Cultured plant cells, genes   pda02865   36796   Pariani S, Contreras M, Rossi FR, Sander V, Corigliano MG, Simón F, Busi MV, Gomez-Casati DF, Pieckenstain FL, Duschak VG, Clemente M.   Characterization of a novel Kazal-type serine proteinase inhibitor of Arabidopsis thaliana.   Biochimie   2016 -2 -9   123   85-94   26853817   10.1016/j.biochi.2016.02.002  
Arabidopsis / Cultured plant cells, genes   rpc00008   36746   Ishida T, Maekawa S, Yanagisawa S.   The Pre-rRNA Processing Complex in Arabidopsis Includes Two WD40-Domain-Containing Proteins Encoded by Glucose-Inducible Genes and Plant-Specific Proteins.   Mol Plant   2016 -2 -1   9(2)   312-5   26555280   10.1016/j.molp.2015.11.003  
Arabidopsis / Cultured plant cells, genes   pda02854, pda02010   36742   Gramegna G, Modesti V, Savatin DV, Sicilia F, Cervone F, De Lorenzo G.   GRP-3 and KAPP, encoding interactors of WAK1, negatively affect defense responses induced by oligogalacturonides and local response to wounding.   J. Exp. Bot.   2016 -1 -10   67(6)   1715-29   26748394   10.1093/jxb/erv563  
Arabidopsis / Cultured plant cells, genes   pda10994   36894   Khatib A, Arhab Y, Bentebibel A, Abousalham A, Noiriel A.   Reassessing the Potential Activities of Plant CGI-58 Protein.   PLoS ONE   2016 -1 -9   11(1)   e0145806   26745266   10.1371/journal.pone.0145806  
Arabidopsis / Cultured plant cells, genes   psb00001   36748   703. Matsumura T, Okamoto T   Isolation of gametes from Brachypodium distachyon.   Plant Biotechnology   2016   33   39-43      
Arabidopsis / Cultured plant cells, genes   pda01627, pda09678, pda11283   36929   Basu D, Tian L, Wang W, Bobbs S, Herock H, Travers A, Showalter AM.   A small multigene hydroxyproline-O-galactosyltransferase family functions in arabinogalactan-protein glycosylation, growth and development in Arabidopsis.   BMC Plant Biol.   2015 -12 -23   15   295   26690932   10.1186/s12870-015-0670-7  
Arabidopsis / Cultured plant cells, genes   pda07225   36744   Kataya AR, Schei E, Lillo C.   Towards understanding peroxisomal phosphoregulation in Arabidopsis thaliana.   Planta   2015 -12 -10   243(3)   699-717   26649560   10.1007/s00425-015-2439-5  
Arabidopsis / Cultured plant cells, genes   pst16145   36745   Kitamura S, Oono Y, Narumi I.   Arabidopsis pab1, a mutant with reduced anthocyanins in immature seeds from banyuls, harbors a mutation in the MATE transporter FFT.   Plant Mol. Biol.   2015 -11 -27   90(1-2)   7-18   26608698   10.1007/s11103-015-0389-8  
Arabidopsis / Cultured plant cells, genes   pdp24095   36840   Tran ML, Roberts AW.   Cellulose synthase gene expression profiling of Physcomitrella patens.   Plant Biol (Stuttg)   2015 -11 -18   18(3)   362-8   26572930   10.1111/plb.12416  
Arabidopsis / Cultured plant cells, genes   rpc00008   36997   Ito T, Kondoh Y, Yoshida K, Umezawa T, Shimizu T, Shinozaki K, Osada H.   Novel Abscisic Acid Antagonists Identified with Chemical Array Screening.   Chembiochem   2015 -10 -24   16(17)   2471-8   26493545   10.1002/cbic.201500429  
Arabidopsis / Cultured plant cells, genes   psh16750   36841   Lutz U, Posé D, Pfeifer M, Gundlach H, Hagmann J, Wang C, Weigel D, Mayer KF, Schmid M, Schwechheimer C.   Modulation of Ambient Temperature-Dependent Flowering in Arabidopsis thaliana by Natural Variation of FLOWERING LOCUS M.   PLoS Genet.   2015 -10 -23   11(10)   e1005588   26492483   10.1371/journal.pgen.1005588  
Arabidopsis / Cultured plant cells, genes   pda09070, pda12452   36747   Byeon Y, Lee HJ, Lee HY, Back K.   Cloning and functional characterization of the Arabidopsis N-acetylserotonin O-methyltransferase responsible for melatonin synthesis.   J. Pineal Res.   2015 -10 -21   60(1)   65-73   26484897   10.1111/jpi.12289  
Arabidopsis / Cultured plant cells, genes   pdp   36842   Reboledo G, Del Campo R, Alvarez A, Montesano M, Mara H, Ponce de León I.   Physcomitrella patens Activates Defense Responses against the Pathogen Colletotrichum gloeosporioides.   Int J Mol Sci   2015 -9 -22   16(9)   22280-98   26389888   10.3390/ijms160922280  
Arabidopsis / Cultured plant cells, genes   pdp24095   37558   Cho SH, Du J, Sines I, Poosarla VG, Vepachedu V, Kafle K, Park YB, Kim SH, Kumar M, Nixon BT.   In vitro synthesis of cellulose microfibrils by a membrane protein from protoplasts of the non-vascular plant Physcomitrella patens.   Biochem. J.   2015 -9 -1   470(2)   195-205   26348908   10.1042/BJ20141391  
Arabidopsis / Cultured plant cells, genes   pda01921   37001   Ariga H, Tanaka T, Ono H, Sakata Y, Hayashi T, Taji T.   CSP41b, a protein identified via FOX hunting using Eutrema salsugineum cDNAs, improves heat and salinity stress tolerance in transgenic Arabidopsis thaliana.   Biochem. Biophys. Res. Commun.   2015 -8 -14   464(1)   318-23   26123393   10.1016/j.bbrc.2015.06.151  
Arabidopsis / Cultured plant cells, genes   pda15960   37112   Van Hove J, De Jaeger G, De Winne N, Guisez Y, Van Damme EJ.   The Arabidopsis lectin EULS3 is involved in stomatal closure.   Plant Sci.   2015 -8 -11   238   312-22   26259197   10.1016/j.plantsci.2015.07.005  
Arabidopsis / Cultured plant cells, genes   pda13118   37113   Oh K, Matsumoto T, Yamagami A, Hoshi T, Nakano T, Yoshizawa Y.   Fenarimol, a Pyrimidine-Type Fungicide, Inhibits Brassinosteroid Biosynthesis.   Int J Mol Sci   2015 -8 -1   16(8)   17273-88   26230686   10.3390/ijms160817273  
Arabidopsis / Cultured plant cells, genes   pda20053   37014   Nishimura K, Ishikawa S, Matsunami E, Yamauchi J, Homma K, Faulkner C, Oparka K, Jisaka M, Nagaya T, Yokota K, Nakagawa T.   New Gateway-compatible vectors for a high-throughput protein-protein interaction analysis by a bimolecular fluorescence complementation (BiFC) assay in plants and their application to a plant clathrin structure analysis.   Biosci. Biotechnol. Biochem.   2015 -7 -21   79(12)   1995-2006   26193449   10.1080/09168451.2015.1060847  
Arabidopsis / Cultured plant cells, genes   pdp24095   37011   Scavuzzo-Duggan TR, Chaves AM, Roberts AW.   A complementation assay for in vivo protein structure/function analysis in Physcomitrella patens (Funariaceae).   Appl Plant Sci   2015 -7 -21   3(7)     26191463   10.3732/apps.1500023  
Arabidopsis / Cultured plant cells, genes   rpc00031   38626   Noda S, Koshiba T, Hattori T, Yamaguchi M, Suzuki S, Umezawa T.   The expression of a rice secondary wall-specific cellulose synthase gene, OsCesA7, is directly regulated by a rice transcription factor, OsMYB58/63.   Planta   2015 -6 -14   242(3)   589-600   26070439   10.1007/s00425-015-2343-z  
Arabidopsis / Cultured plant cells, genes   pda02786   38625   Walter B, Hristou A, Nowaczyk MM, Schünemann D.   In vitro reconstitution of co-translational D1 insertion reveals a role of the cpSec-Alb3 translocase and Vipp1 in photosystem II biogenesis.   Biochem. J.   2015 -6 -1   468(2)   315-24   25803492   10.1042/BJ20141425  
Arabidopsis / Cultured plant cells, genes   pda08691   37114   Basu D, Wang W, Ma S, DeBrosse T, Poirier E, Emch K, Soukup E, Tian L, Showalter AM.   Two Hydroxyproline Galactosyltransferases, GALT5 and GALT2, Function in Arabinogalactan-Protein Glycosylation, Growth and Development in Arabidopsis.   PLoS ONE   2015 -5 -15   10(5)   e0125624   25974423   10.1371/journal.pone.0125624  
Arabidopsis / Cultured plant cells, genes   pda04148   36998   Kataya AR, Schei E, Lillo C.   MAP kinase phosphatase 1 harbors a novel PTS1 and is targeted to peroxisomes following stress treatments.   J. Plant Physiol.   2015 -5 -1   179   12-20   25817413   10.1016/j.jplph.2015.03.002  
Arabidopsis / Cultured plant cells, genes   rpc00008   36992   Shigeta T, Zaizen Y, Sugimoto Y, Nakamura Y, Matsuo T, Okamoto S.   Heat shock protein 90 acts in brassinosteroid signaling through interaction with BES1/BZR1 transcription factor.   J. Plant Physiol.   2015 -4 -15   178   69-73   25778412   10.1016/j.jplph.2015.02.003  
Arabidopsis / Cultured plant cells, genes   psh16445   37010   Smith SJ, Kroon JT, Simon WJ, Slabas AR, Chivasa S.   A Novel Function for Arabidopsis CYCLASE1 in Programmed Cell Death Revealed by Isobaric Tags for Relative and Absolute Quantitation (iTRAQ) Analysis of Extracellular Matrix Proteins.   Mol. Cell Proteomics   2015 -4 -12   14(6)   1556-68   25862728   10.1074/mcp.M114.045054  
Arabidopsis / Cultured plant cells, genes   pdp   33340   Machado L, Castro A, Hamberg M, Bannenberg G, Gaggero C, Castresana C, de León IP.   The Physcomitrella patens unique alpha-dioxygenase participates in both developmental processes and defense responses.   BMC Plant Biol.   2015 -4 -8   15   45   25848849   10.1186/s12870-015-0439-z  
Arabidopsis / Cultured plant cells, genes   pss10001-10010   37000   Lu Y, Sasaki Y, Li X, Mori IC, Matsuura T, Hirayama T, Sato T, Yamaguchi J.   ABI1 regulates carbon/nitrogen-nutrient signal transduction independent of ABA biosynthesis and canonical ABA signalling pathways in Arabidopsis.   J. Exp. Bot.   2015 -3 -22   66(9)   2763-71   25795738   10.1093/jxb/erv086  
Arabidopsis / Cultured plant cells, genes   pda13118   33355   Oh K, Matsumoto T, Yamagami A, Ogawa A, Yamada K, Suzuki R, Sawada T, Fujioka S, Yoshizawa Y, Nakano T.   YCZ-18 is a new brassinosteroid biosynthesis inhibitor.   PLoS ONE   2015 -3 -21   10(3)   e0120812   25793645   10.1371/journal.pone.0120812  
Arabidopsis / Cultured plant cells, genes   pda04554   36996   Seung D, Soyk S, Coiro M, Maier BA, Eicke S, Zeeman SC.   PROTEIN TARGETING TO STARCH is required for localising GRANULE-BOUND STARCH SYNTHASE to starch granules and for normal amylose synthesis in Arabidopsis.   PLoS Biol.   2015 -2 -25   13(2)   e1002080   25710501   10.1371/journal.pbio.1002080  
Arabidopsis / Cultured plant cells, genes   pst18264   36995   Kolb C, Nagel MK, Kalinowska K, Hagmann J, Ichikawa M, Anzenberger F, Alkofer A, Sato MH, Braun P, Isono E.   FYVE1 is essential for vacuole biogenesis and intracellular trafficking in Arabidopsis.   Plant Physiol.   2015 -2 -24   167(4)   1361-73   25699591   10.1104/pp.114.253377  
Arabidopsis / Cultured plant cells, genes   pst18264   37013   Gao C, Zhuang X, Cui Y, Fu X, He Y, Zhao Q, Zeng Y, Shen J, Luo M, Jiang L.   Dual roles of an Arabidopsis ESCRT component FREE1 in regulating vacuolar protein transport and autophagic degradation.   Proc. Natl. Acad. Sci. U.S.A.   2015 -2 -10   112(6)   1886-91   25624505   10.1073/pnas.1421271112  
Arabidopsis / Cultured plant cells, genes   pda02094, pda06768   33344   Saito H, Oikawa T, Hamamoto S, Ishimaru Y, Kanamori-Sato M, Sasaki-Sekimoto Y, Utsumi T, Chen J, Kanno Y, Masuda S, Kamiya Y, Seo M, Uozumi N, Ueda M, Ohta H.   The jasmonate-responsive GTR1 transporter is required for gibberellin-mediated stamen development in Arabidopsis.   Nat Commun   2015 -2 -5   6   6095   25648767   10.1038/ncomms7095  
Arabidopsis / Cultured plant cells, genes   rpc00008   36991   Shigeto J, Itoh Y, Hirao S, Ohira K, Fujita K, Tsutsumi Y.   Simultaneously disrupting AtPrx2, AtPrx25 and AtPrx71 alters lignin content and structure in Arabidopsis stem.   J Integr Plant Biol   2015 -2 -4   57(4)   349-56   25644691   10.1111/jipb.12334  
Arabidopsis / Cultured plant cells, genes   rpc00001   36993   Yokoo T, Matsumoto K, Ooba T, Morimoto K, Taguchi S.   Enhanced poly(3-hydroxybutyrate) production in transgenic tobacco BY-2 cells using engineered acetoacetyl-CoA reductase.   Biosci. Biotechnol. Biochem.   2015 -2 -4   79(6)   986-8   25647430   10.1080/09168451.2014.1002448  
Arabidopsis / Cultured plant cells, genes   pda17902   33342   Sheerin DJ, Menon C, zur Oven-Krockhaus S, Enderle B, Zhu L, Johnen P, Schleifenbaum F, Stierhof YD, Huq E, Hiltbrunner A.   Light-activated phytochrome A and B interact with members of the SPA family to promote photomorphogenesis in Arabidopsis by reorganizing the COP1/SPA complex.   Plant Cell   2015 -1 -30   27(1)   189-201   25627066   10.1105/tpc.114.134775  
Arabidopsis / Cultured plant cells, genes   rpc00008   33343   Suzuki Y, Arae T, Green PJ, Yamaguchi J, Chiba Y.   AtCCR4a and AtCCR4b are Involved in Determining the Poly(A) Length of Granule-bound starch synthase 1 Transcript and Modulating Sucrose and Starch Metabolism in Arabidopsis thaliana.   Plant Cell Physiol.   2015 -1 -30   56(5)   863-74   25630334   10.1093/pcp/pcv012  
Arabidopsis / Cultured plant cells, genes   rpc00008   36989   Reyes TH, Maekawa S, Sato T, Yamaguchi J.   The Arabidopsis ubiquitin ligase ATL31 is transcriptionally controlled by WRKY33 transcription factor in response to pathogen attack.   Plant Biotechnology   2015 -01 -29   32   11-19     10.5511/plantbiotechnology.14.1201b  
Arabidopsis / Cultured plant cells, genes   rpc00008   36988   Ogawa-Ohnishi M, Matsubayashi Y.   Identification of three potent hydroxyproline O-galactosyltransferases in Arabidopsis.   Plant J.   2015 -1 -21   81(5)   736-46   25600942   10.1111/tpj.12764  
Arabidopsis / Cultured plant cells, genes   pda02782   33341   Köhler D, Montandon C, Hause G, Majovsky P, Kessler F, Baginsky S, Agne B.   Characterization of chloroplast protein import without Tic56, a component of the 1-megadalton translocon at the inner envelope membrane of chloroplasts.   Plant Physiol.   2015 -1 -16   167(3)   972-90   25588737   10.1104/pp.114.255562  
Arabidopsis / Cultured plant cells, genes   pda06484   37003   Levesque-Tremblay G, Müller K, Mansfield SD, Haughn GW.   HIGHLY METHYL ESTERIFIED SEEDS is a pectin methyl esterase involved in embryo development.   Plant Physiol.   2015 -1 -13   167(3)   725-37   25572606   10.1104/pp.114.255604  
Arabidopsis / Cultured plant cells, genes   psh19427   37002   Levesque-Tremblay G, Müller K, Mansfield SD, Haughn GW.   HIGHLY METHYL ESTERIFIED SEEDS is a pectin methyl esterase involved in embryo development.   Plant Physiol.   2015 -1 -13   167(3)   725-37   25572606   10.1104/pp.114.255604  
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