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Species Resource name RRC ID Author Title Journal Published Volume Pages Pubmed ID DOI
Algae   NIES-2239   47908   Livingston G, Fukumori K, Provete DB, Kawachi M, Takamura N, Leibold MA.   Predators regulate prey species sorting and spatial distribution in microbial landscapes.   J Anim Ecol   2017 -5   86(3)   501-510   28138991   10.1111/1365-2656.12639  
Algae   NIES-970   47909   Shimura Y, Hirose Y, Misawa N, Wakazuki S, Fujisawa T, Nakamura Y, Kanesaki Y, Yamaguchi H, Kawachi M.   Complete Genome Sequence of a Coastal Cyanobacterium, Synechococcus sp. Strain NIES-970.   Genome Announc   2017 -4 -06   5(14)     28385852   10.1128/genomeA.00139-17  
Algae   NIES-208, NIES-592, NIES-593, NIES-1031, NIES-2119,...   47901   Zhu T, Hou S, Lu X, Hess WR.   Draft Genome Sequences of Nine Cyanobacterial Strains from Diverse Habitats.   Genome Announc   2017 -3 -02   5(9)     28254973   10.1128/genomeA.01676-16  
Algae   NIES-843   37465   Meglič A, Pecman A, Rozina T, Leštan D, Sedmak B.   Electrochemical inactivation of cyanobacteria and microcystin degradation using a boron-doped diamond anode - A potential tool for cyanobacterial bloom control.   J Environ Sci (China)   2017 -3   53   248-261   28372749   10.1016/j.jes.2016.02.016  
Algae   NIES-254   47907   Satjarak A, Graham LE.   Comparative DNA sequence analyses of Pyramimonas parkeae (Prasinophyceae) chloroplast genomes.   J. Phycol.   2017 -1 -28       28130930   10.1111/jpy.12515  
Algae   NIES-2535   47870   Hamana K, Furuchi T, Nakamura T, Hayashi H, Niitsu M.   Occurrence of penta-amines, hexa-amines and N-methylated polyamines in unicellular eukaryotic organisms belonging to the phyla Heterokontophyta and Labyrinthulomycota of the subdomain Stramenopiles.   J. Gen. Appl. Microbiol.   2017 -1 -25   62(6)   320-325   27773915   10.2323/jgam.2016.05.001  
Algae   NIES-39   47849   Motwalli O, Essack M, Jankovic BR, Ji B, Liu X, Ansari HR, Hoehndorf R, Gao X, Arold ST, Mineta K, Archer JA, Gojobori T, Mijakovic I, Bajic VB.   In silico screening for candidate chassis strains of free fatty acid-producing cyanobacteria.   BMC Genomics   2017 -1 -05   18(1)   33   28056772   10.1186/s12864-016-3389-4  
Algae   NIES-48   47851   Shibakami M, Sohma M.   Synthesis and thermal properties of paramylon mixed esters and optical, mechanical, and crystal properties of their hot-pressed films.   Carbohydr Polym   2017 -1 -02   155   416-424   27702530   10.1016/j.carbpol.2016.08.093  
Algae   NIES-144   47415   Allewaert, C. C., Vanormelingen, P., Daveloose, I., Vyverman, T.   Intraspecific trait variation affecting astaxanthin productivity in two Haematococcus (Chlorophyceae) species.   Algal Research   2017   21   191-202     10.1016/j.algal.2016.10.021  
Algae   NIES-218   47906   Inamura, E., Katayama, T., Taguchi, S.   Absorption of low-dose ultraviolet radiation by mycosporine-like amino acids induced by the dinoflagellate Prorocentrum micans.   Plankton Benthos Res.,   2017   12,   15-24.      
Algae   NIES-144   47418   Kiperstok, A. C., Sebestyén, P., Podola, B., Melkonian, M.   Biofilm cultivation of Haematococcus pluvialis enables a highly productive one-phase process for astaxanthin production using high light intensities.   Algal Research   2017   21   213-222     10.1016/j.algal.2016.10.025  
Algae   NIES-227   47899   Suzuki, N., Sanada, T., Terashima, C., Suzuki, T., Arai, T., Saitou, S., Kawashima, T., Mizutani, A., Saitou, T., Nakata, K., Katsumata, K., Kondo, T., Yuasa, M., Fujishima, A.   Systematic studies of TiO2-based photocatalysts anti-algal effects on Chlorella vulgaris.   J. Appl. Electrochem.,   2017   47,   197-203.      
Algae   NIES-39   47903   Tadama, S., Shiraishi, H.   Growth of the edible microalga Arthrospira platensis in relation to boron supply.   International Journal of GEOMATE,   2017   12,   90-95.      
Algae   NIES-155   47904   Watanabe, S., Lewis, L. A.   Phylogenetic interpretation of light and electron microscopic features of selected members of the phylogroup Moewusinia (Chlorophyceae), with new generic taxonomy.   Phycologia,   2017   56,   329-353.      
Algae   NIES-1332   47412   Zienkiewicz M, Krupnik T, Drożak A, Golke A, Romanowska E.   Transformation of the Cyanidioschyzon merolae chloroplast genome: prospects for understanding chloroplast function in extreme environments.   Plant Mol. Biol.   2017 -1   93(1-2)   171-183   27796719   10.1007/s11103-016-0554-8  
Algae   NIES-3377   37145   Zienkiewicz M, Krupnik T, Drożak A, Golke A, Romanowska E.   Chloramphenicol acetyltransferase-a new selectable marker in stable nuclear transformation of the red alga Cyanidioschyzon merolae.   Protoplasma   2017 -1   254(1)   587-596   26715590   10.1007/s00709-015-0936-9  
Algae   NIES-1332   47375   Loganathan N, Tsai YC, Mueller-Cajar O.   Characterization of the heterooligomeric red-type rubisco activase from red algae.   Proc. Natl. Acad. Sci. U.S.A.   2016 -12 -06   113(49)   14019-14024   27872295   10.1073/pnas.1610758113  
Algae   NIES-2086, NIES-2087   39750   Komatsu H, Wada K, Kanjoh T, Miyashita H, Sato M, Kawachi M, Kobayashi M.   Unique chlorophylls in picoplankton Prochlorococcus sp. "Physicochemical properties of divinyl chlorophylls, and the discovery of monovinyl chlorophyll b as well as divinyl chlorophyll b in the species Prochlorococcus NIES-2086".   Photosyn. Res.   2016 -12   130(1-3)   445-467   27334004   10.1007/s11120-016-0283-5  
Algae   NIES-39   47879   Nogami R, Nishida H, Hong DD, Wakisaka M.   Growth promotion of Spirulina by steelmaking slag: application of solubility diagram to understand its mechanism.   AMB Express   2016 -12   6(1)   96   27730571   10.1186/s13568-016-0270-4  
Algae   NIES-981   47217   Yamagishi T, Katsumata M, Yamaguchi H, Shimura Y, Kawachi M, Koshikawa H, Horie Y, Tatarazako N.   Rapid ecotoxicological bioassay using delayed fluorescence in the marine cyanobacterium Cyanobium sp. (NIES-981).   Ecotoxicology   2016 -12   25(10)   1751-1758   27633095   10.1007/s10646-016-1718-7  
Algae   NIES-547, NIES-3377   47898   Sumiya N, Fujiwara T, Era A, Miyagishima SY.   Chloroplast division checkpoint in eukaryotic algae.   Proc. Natl. Acad. Sci. U.S.A.   2016 -11 -22   113(47)   E7629-E7638   27837024   10.1073/pnas.1612872113  
Algae   NIES-2364   47411   Shirokawa Y, Shimada M.   Cytoplasmic inheritance of parent-offspring cell structure in the clonal diatom Cyclotella meneghiniana.   Proc. Biol. Sci.   2016 -11 -16   283(1842)     27807268   10.1098/rspb.2016.1632  
Algae   NIES-81,NIES-824,NIES-2104,NIES-2116,NIES-905,...   47212   Chiu YT, Yen HK, Lin TF.   An alternative method to quantify 2-MIB producing cyanobacteria in drinking water reservoirs: Method development and field applications.   Environ. Res.   2016 -11   151   618-627   27607443   10.1016/j.envres.2016.08.034  
Algae   NIES-3877, NIES-3876   47889   Shiratori T, Ishida KI.   Trachyrhizium urniformis n. g., n. sp., a Novel Marine Filose Thecate Amoeba Related to a Cercozoan Environmental Clade (Novel Clade 4).   J. Eukaryot. Microbiol.   2016 -11   63(6)   722-731   27061962   10.1111/jeu.12319  
Algae   NIES-2682, NIES-3369, NIES-3370, NIES-3371   37158   Ichinomiya M, Dos Santos AL, Gourvil P, Yoshikawa S, Kamiya M, Ohki K, Audic S, de Vargas C, Noël MH, Vaulot D, Kuwata A.   Diversity and oceanic distribution of the Parmales (Bolidophyceae), a picoplanktonic group closely related to diatoms.   ISME J   2016 -10   10(10)   2419-34   27003244   10.1038/ismej.2016.38  
Algae   NIES-144   37432   Zhang Z, Wang B, Hu Q, Sommerfeld M, Li Y, Han D.   A new paradigm for producing astaxanthin from the unicellular green alga Haematococcus pluvialis.   Biotechnol. Bioeng.   2016 -10   113(10)   2088-99   27563850   10.1002/bit.25976  
Algae   NIES-2202, NIES-2207, NIES-2212, NIES-2242   47218   Hirashima T, Tajima N, Sato N.   Draft Genome Sequences of Four Species of Chlamydomonas Containing Phosphatidylcholine.   Genome Announc   2016 -9 -29   4(5)     27688324   10.1128/genomeA.01070-16  
Algae   NIES-2242, NIES-2207   47848   Sato N, Mori N, Hirashima T, Moriyama T.   Diverse pathways of phosphatidylcholine biosynthesis in algae as estimated by labeling studies and genomic sequence analysis.   Plant J.   2016 -8   87(3)   281-92   27133435   10.1111/tpj.13199  
Algae   NIES-48   47219   Wakisaka Y, Suzuki Y, Iwata O, Nakashima A, Ito T, Hirose M, Domon R, Sugawara M, Tsumura N, Watarai H, Shimobaba T, Suzuki K, Goda K, Ozeki Y.   Probing the metabolic heterogeneity of live Euglena gracilis with stimulated Raman scattering microscopy.   Nat Microbiol   2016 -8 -01   1(10)   16124   27670110   10.1038/nmicrobiol.2016.124  
Algae   NIES-2168   47401   Wang Y, Chiu SY, Ho SH, Liu Z, Hasunuma T, Chang TT, Chang KF, Chang JS, Ren NQ, Kondo A.   Improving carbohydrate production of Chlorella sorokiniana NIES-2168 through semi-continuous process coupled with mixotrophic cultivation.   Biotechnol J   2016 -8   11(8)   1072-81   27312599   10.1002/biot.201500270  
Algae   NIES-981   47171   Yamaguchi H, Shimura Y, Suzuki S, Yamagishi T, Tatarazako N, Kawachi M.   Complete Genome Sequence of Cyanobium sp. NIES-981, a Marine Strain Potentially Useful for Ecotoxicological Bioassays.   Genome Announc   2016 -7 -28   4(4)     27469961   10.1128/genomeA.00736-16  
Algae   NIES-2087   37461   Kobayashi A, Sekiguchi Y, Oroguchi T, Okajima K, Fukuda A, Oide M, Yamamoto M, Nakasako M.   Specimen preparation for cryogenic coherent X-ray diffraction imaging of biological cells and cellular organelles by using the X-ray free-electron laser at SACLA.   J Synchrotron Radiat   2016 -7   23(Pt 4)   975-89   27359147   10.1107/S1600577516007736  
Algae   NIES-39   47905   Misumi M, Katoh H, Tomo T, Sonoike K.   Relationship Between Photochemical Quenching and Non-Photochemical Quenching in Six Species of Cyanobacteria Reveals Species Difference in Redox State and Species Commonality in Energy Dissipation.   Plant Cell Physiol.   2016 -7   57(7)   1510-1517   26712847   10.1093/pcp/pcv185  
Algae   NIES-2541,NIES-254,NIES-1419,NIES-2582   47413   Kunugi M, Satoh S, Ihara K, Shibata K, Yamagishi Y, Kogame K, Obokata J, Takabayashi A, Tanaka A.   Evolution of Green Plants Accompanied Changes in Light-Harvesting Systems.   Plant Cell Physiol.   2016 -6   57(6)   1231-43   27057002   10.1093/pcp/pcw071  
Algae   NIES-1332,NIES-697,NIES-700,NIES-705,NIES-2137,...   37367   Takaichi S, Yokoyama A, Mochimaru M, Uchida H, Murakami A.   Carotenogenesis diversification in phylogenetic lineages of Rhodophyta.   J. Phycol.   2016 -6   52(3)   329-38   27273528   10.1111/jpy.12411  
Algae   NIES-102   37189   Tomita K, Hasegawa M, Arii S, Tsuji K, Bober B, Harada K.   Characteristic oxidation behavior of β-cyclocitral from the cyanobacterium Microcystis.   Environ Sci Pollut Res Int   2016 -6   23(12)   11998-2006   26961531   10.1007/s11356-016-6369-y  
Algae   NIES-39,NIES-46,NIES-2308   37460   Shiraishi H.   Cryopreservation of the edible alkalophilic cyanobacterium Arthrospira platensis.   Biosci. Biotechnol. Biochem.   2016 -5 -31     1-7   27240586   10.1080/09168451.2016.1189320  
Algae   NIES-2863   47221   Hamaji T, Mogi Y, Ferris PJ, Mori T, Miyagishima S, Kabeya Y, Nishimura Y, Toyoda A, Noguchi H, Fujiyama A, Olson BJ, Marriage TN, Nishii I, Umen JG, Nozaki H.   Sequence of the Gonium pectorale Mating Locus Reveals a Complex and Dynamic History of Changes in Volvocine Algal Mating Haplotypes.   G3 (Bethesda)   2016 -5 -03   6(5)   1179-89   26921294   10.1534/g3.115.026229  
Algae   NIES-123,NIES-144,NIES-421,NIES-428,NIES-432,...   39744   Munakata H, Nakada T, Nakahigashi K, Nozaki H, Tomita M.   Phylogenetic Position and Molecular Chronology of a Colonial Green Flagellate, Stephanosphaera pluvialis (Volvocales, Chlorophyceae), among Unicellular Algae.   J. Eukaryot. Microbiol.   2016 -5   63(3)   340-8   26595722   10.1111/jeu.12283  
Algae   NIES-48   39751   Park JW, Kim SH, Ito T, Fujii T, Kim SY, Laurell T, Lee SW, Goda K.   Acoustofluidic harvesting of microalgae on a single chip.   Biomicrofluidics   2016 -5   10(3)   034119   27462380   10.1063/1.4954744  
Algae   NIES-3721   39731   Shiratori T, Ishida K.   Entamoeba marina n. sp.; a New Species of Entamoeba Isolated from Tidal Flat Sediment of Iriomote Island, Okinawa, Japan.   J. Eukaryot. Microbiol.   2016 -5   63(3)   280-6   26452446   10.1111/jeu.12276  
Algae   NIES-3575   37458   Watanabe S, Fučíková K, Lewis LA, Lewis PO.   Hiding in plain sight: Koshicola spirodelophila gen. et sp. nov. (Chaetopeltidales, Chlorophyceae), a novel green alga associated with the aquatic angiosperm Spirodela polyrhiza.   Am. J. Bot.   2016 -5   103(5)   865-75   27208355   10.3732/ajb.1500481  
Algae   NIES-2322,NIES-3707,NIES-2575,NIES-2320,NIES-2321,...   37159   Nakada T, Tomita M, Wu JT, Nozaki H.   Taxonomic revision of Chlamydomonas subg. Amphichloris (Volvocales, Chlorophyceae), with resurrection of the genus Dangeardinia and descriptions of Ixipapillifera gen. nov. and Rhysamphichloris gen. nov.   J. Phycol.   2016 -4   52(2)   283-304   27037593   10.1111/jpy.12397  
Algae   NIES-35   37332   Watanabe H, Tamura I, Abe R, Takanobu H, Nakamura A, Suzuki T, Hirose A, Nishimura T, Tatarazako N.   Chronic toxicity of an environmentally relevant mixture of pharmaceuticals to three aquatic organisms (alga, daphnid, and fish).   Environ. Toxicol. Chem.   2016 -4   35(4)   996-1006   26472177   10.1002/etc.3285  
Algae   NIES-3755   37291   Hirose Y, Fujisawa T, Ohtsubo Y, Katayama M, Misawa N, Wakazuki S, Shimura Y, Nakamura Y, Kawachi M, Yoshikawa H, Eki T, Kanesaki Y.   Complete Genome Sequence of Cyanobacterium Leptolyngbya sp. NIES-3755.   Genome Announc   2016 -3 -17   4(2)     26988037   10.1128/genomeA.00090-16  
Algae   NIES-88   39749   Parajuli A, Kwak DH, Dalponte L, Leikoski N, Galica T, Umeobika U, Trembleau L, Bent A, Sivonen K, Wahlsten M, Wang H, Rizzi E, De Bellis G, Naismith J, Jaspars M, Liu X, Houssen W, Fewer DP.   A Unique Tryptophan C-Prenyltransferase from the Kawaguchipeptin Biosynthetic Pathway.   Angew. Chem. Int. Ed. Engl.   2016 -3 -7   55(11)   3596-9   26846478   10.1002/anie.201509920  
Algae   NIES-3754   37160   Hirose Y, Fujisawa T, Ohtsubo Y, Katayama M, Misawa N, Wakazuki S, Shimura Y, Nakamura Y, Kawachi M, Yoshikawa H, Eki T, Kanesaki Y.   Complete genome sequence of cyanobacterium Fischerella sp. NIES-3754, providing thermoresistant optogenetic tools.   J. Biotechnol.   2016 -2 -20   220   45-6   26784989   10.1016/j.jbiotec.2016.01.011  
Algae   NIES-1318   47195   Jin P, Gao K.   Reduced resilience of a globally distributed coccolithophore to ocean acidification: Confirmed up to 2000 generations.   Mar. Pollut. Bull.   2016 -2 -15   103(1-2)   101-8   26746379   10.1016/j.marpolbul.2015.12.039  
Algae   NIES-3764   47397   Kamikawa R, Shiratori T, Ishida K, Miyashita H, Roger AJ.   Group II Intron-Mediated Trans-Splicing in the Gene-Rich Mitochondrial Genome of an Enigmatic Eukaryote, Diphylleia rotans.   Genome Biol Evol   2016 -2 -01   8(2)   458-66   26833505   10.1093/gbe/evw011  
Algae   NIES-765,NIES-1966,NIES-2842   37161   Kawachi M, Kataoka T, Sato M, Noël MH, Kuwata A, Demura M, Yamaguchi H.   Application of cryopreservation to genetic analyses of a photosynthetic picoeukaryote community.   Gene   2016 -2 -1   576(2 Pt 1)   708-16   26506442   10.1016/j.gene.2015.10.033  
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