RRC ID 51408
著者 Philippe L, Pandarakalam GC, Fasimoye R, Harrison N, Connolly B, Pettitt J, Müller B.
タイトル An in vivo genetic screen for genes involved in spliced leader trans-splicing indicates a crucial role for continuous de novo spliced leader RNP assembly.
ジャーナル Nucleic Acids Res
Abstract Spliced leader (SL) trans-splicing is a critical element of gene expression in a number of eukaryotic groups. This process is arguably best understood in nematodes, where biochemical and molecular studies in Caenorhabditis elegans and Ascaris suum have identified key steps and factors involved. Despite this, the precise details of SL trans-splicing have yet to be elucidated. In part, this is because the systematic identification of the molecules involved has not previously been possible due to the lack of a specific phenotype associated with defects in this process. We present here a novel GFP-based reporter assay that can monitor SL1 trans-splicing in living C. elegans. Using this assay, we have identified mutants in sna-1 that are defective in SL trans-splicing, and demonstrate that reducing function of SNA-1, SNA-2 and SUT-1, proteins that associate with SL1 RNA and related SmY RNAs, impairs SL trans-splicing. We further demonstrate that the Sm proteins and pICln, SMN and Gemin5, which are involved in small nuclear ribonucleoprotein assembly, have an important role in SL trans-splicing. Taken together these results provide the first in vivo evidence for proteins involved in SL trans-splicing, and indicate that continuous replacement of SL ribonucleoproteins consumed during trans-splicing reactions is essential for effective trans-splicing.
巻・号 45(14)
ページ 8474-8483
公開日 2017-8-21
DOI 10.1093/nar/gkx500
PII 3860636
PMID 28582530
PMC PMC5737717
MeSH Animals Animals, Genetically Modified Base Sequence Caenorhabditis elegans / genetics Caenorhabditis elegans / metabolism Green Fluorescent Proteins / genetics Green Fluorescent Proteins / metabolism Helminth Proteins / genetics* Helminth Proteins / metabolism Microscopy, Fluorescence RNA Interference RNA Precursors / genetics RNA Precursors / metabolism RNA, Helminth / genetics* RNA, Helminth / metabolism RNA, Messenger / genetics RNA, Messenger / metabolism RNA, Spliced Leader / genetics* RNA, Spliced Leader / metabolism Reverse Transcriptase Polymerase Chain Reaction Ribonucleoproteins / genetics* Ribonucleoproteins / metabolism Ribonucleoproteins, Small Nuclear / genetics Ribonucleoproteins, Small Nuclear / metabolism Trans-Splicing*
IF 11.502
引用数 5
リソース情報
線虫 tm3079