| RRC ID |
48465
|
| 著者 |
Choi SG, Jeon SH, Lee JB, Joo ES, Lim S, Jung HY, Kim MK.
|
| タイトル |
Deinococcus rubellus sp. nov., bacteria isolated from the muscle of antarctic fish.
|
| ジャーナル |
J Microbiol
|
| Abstract |
Two new bacterial strains designated as Ant6T and Ant18 were isolated from the muscle of a fish which had been caught in the Antarctic Ocean. Both strains are Gram-stain-positive, catalase positive, oxidase negative, aerobic, and coccoid bacteria. Phylogenetic analysis based on the 16S rRNA gene sequences of strains Ant6T and Ant18 revealed that the strains Ant6T and Ant18 belong to the genus Deinococcus in the family Deinococcaceae in the class Deinococci. The highest degrees of sequence similarities of strains Ant6T and Ant18 were found with Deinococcus alpinitundrae LMG 24283T by 96.4% and 96.8%, respectively. Strain Ant6T exhibited a high level of DNA- DNA hybridization values with strain Ant18 (82 ± 0.6%). Chemotaxonomic data revealed that the predominant fatty acids were C17: 0 cyclo, 16:0, and feature 3 (C16:1 ω6c/ω7c) for both strains. A complex polar lipid profile consisted of major amounts of unknown phosphoglycolipids (PGL) and unknown aminophospholipid (APL). Based on the phylogenetic, phenotypic, and chemotaxonomic data, strains Ant6T (=KEMB 9004-169T =JCM 31434T) and Ant18 (=KEMB 9004-170) should be classified as a new species, for which the name Deinococcus rubellus sp. nov. is proposed.
|
| 巻・号 |
54(12)
|
| ページ |
796-801
|
| 公開日 |
2016-12-1
|
| DOI |
10.1007/s12275-016-6390-3
|
| PII |
10.1007/s12275-016-6390-3
|
| PMID |
27888462
|
| MeSH |
Animals
Antarctic Regions
Bacterial Typing Techniques
Base Composition
DNA, Bacterial
DNA, Ribosomal
Deinococcus / classification*
Deinococcus / genetics
Deinococcus / isolation & purification*
Deinococcus / radiation effects
Fatty Acids / chemistry
Fishes / anatomy & histology
Fishes / microbiology*
Gamma Rays
Genes, rRNA
Glycolipids / chemistry
Muscles / microbiology*
Nucleic Acid Hybridization
Oceans and Seas
Phenotype
Phospholipids / chemistry
Phylogeny
RNA, Ribosomal, 16S
Sequence Analysis, DNA
|
| IF |
2.845
|
| 引用数 |
0
|
|
WOS 分野
|
MICROBIOLOGY
|
| リソース情報 |
| 一般微生物 |
JCM 31434 |
