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Species Resource name RRC ID Author Title Journal Published Volume Pages Pubmed ID DOI
Arabidopsis / Cultured plant cells, genes   pda06002   48576   Hauenstein M, Christ B, Das A, Aubry S, Hörtensteiner S.   A Role for TIC55 as a Hydroxylase of Phyllobilins, the Products of Chlorophyll Breakdown during Plant Senescence.   Plant Cell   2016 -9 -23   28(10)   2510-2527   27655840   10.1105/tpc.16.00630  
Arabidopsis / Cultured plant cells, genes   pda19394, pda09911   48789   Feike D, Seung D, Graf A, Bischof S, Ellick T, Coiro M, Soyk S, Eicke S, Mettler-Altmann T, Lu KJ, Trick M, Zeeman SC, Smith AM.   The Starch Granule-Associated Protein EARLY STARVATION1 Is Required for the Control of Starch Degradation in Arabidopsis thaliana Leaves.   Plant Cell   2016 -5 -22   28(6)   1472-89   27207856   10.1105/tpc.16.00011  
Rice   Induced Mutation Lines   33532   Yan J, Aboshi T, Teraishi M, Strickler SR, Spindel JE, Tung CW, Takata R, Matsumoto F, Maesaka Y, McCouch SR, Okumoto Y, Mori N, Jander G.   The Tyrosine Aminomutase TAM1 Is Required for β-Tyrosine Biosynthesis in Rice.   Plant Cell   2015 -4 -23   27(4)   1265-78   25901084   10.1105/tpc.15.00058  
Rice   Induced mutation lines   47235   Tanaka W, Ohmori Y, Ushijima T, Matsusaka H, Matsushita T, Kumamaru T, Kawano S, Hirano HY.   Axillary Meristem Formation in Rice Requires the WUSCHEL Ortholog TILLERS ABSENT1.   Plant Cell   2015 -4   27(4)   1173-84   25841039   10.1105/tpc.15.00074  
Arabidopsis / Cultured plant cells, genes   pda17902   33342   Sheerin DJ, Menon C, zur Oven-Krockhaus S, Enderle B, Zhu L, Johnen P, Schleifenbaum F, Stierhof YD, Huq E, Hiltbrunner A.   Light-activated phytochrome A and B interact with members of the SPA family to promote photomorphogenesis in Arabidopsis by reorganizing the COP1/SPA complex.   Plant Cell   2015 -1 -30   27(1)   189-201   25627066   10.1105/tpc.114.134775  
Tomato   TOMJPF00001 (Micro-Tom)   32172   Sawai S, Ohyama K, Yasumoto S, Seki H, Sakuma T, Yamamoto T, Takebayashi Y, Kojima M, Sakakibara H, Aoki T, Muranaka T, Saito K, Umemoto N.   Sterol side chain reductase 2 is a key enzyme in the biosynthesis of cholesterol, the common precursor of toxic steroidal glycoalkaloids in potato.   Plant Cell   2014 -9   26(9)   3763-74   25217510   10.1105/tpc.114.130096  
Rice   Induced mutation lines   36153   Tsuda K, Kurata N, Ohyanagi H, Hake S.   Genome-wide study of KNOX regulatory network reveals brassinosteroid catabolic genes important for shoot meristem function in rice.   Plant Cell   2014 -9   26(9)   3488-500   25194027   10.1105/tpc.114.129122  
Arabidopsis / Cultured plant cells, genes   sja05800   31370   Segami S, Makino S, Miyake A, Asaoka M, Maeshima M.   Dynamics of vacuoles and H+-pyrophosphatase visualized by monomeric green fluorescent protein in Arabidopsis: artifactual bulbs and native intravacuolar spherical structures.   Plant Cell   2014 -8   26(8)   3416-34   25118245   10.1105/tpc.114.127571  
Arabidopsis / Cultured plant cells, genes   pda12394   31369   Niehaus TD, Nguyen TN, Gidda SK, ElBadawi-Sidhu M, Lambrecht JA, McCarty DR, Downs DM, Cooper AJ, Fiehn O, Mullen RT, Hanson AD.   Arabidopsis and maize RidA proteins preempt reactive enamine/imine damage to branched-chain amino acid biosynthesis in plastids.   Plant Cell   2014 -7 -30   26(7)   3010-22   25070638   10.1105/tpc.114.126854  
Arabidopsis / Cultured plant cells, genes   rpc00008   31364   Fukazawa J, Teramura H, Murakoshi S, Nasuno K, Nishida N, Ito T, Yoshida M, Kamiya Y, Yamaguchi S, Takahashi Y.   DELLAs function as coactivators of GAI-ASSOCIATED FACTOR1 in regulation of gibberellin homeostasis and signaling in Arabidopsis.   Plant Cell   2014 -7 -19   26(7)   2920-38   25035403   10.1105/tpc.114.125690  
DNA material, General Microbes   Genomic DNA of Thermus thermophilus JCM 10941T (JGD05989...   31029   Dornfeld C, Weisberg AJ, K C R, Dudareva N, Jelesko JG, Maeda HA.   Phylobiochemical characterization of class-Ib aspartate/prephenate aminotransferases reveals evolution of the plant arogenate phenylalanine pathway.   Plant Cell   2014 -7   26(7)   3101-14   25070637   10.1105/tpc.114.127407  
Arabidopsis / Cultured plant cells, genes   pda05122, pda13433, pda00891, pda11840,...   30789   Jarsch IK, Konrad SS, Stratil TF, Urbanus SL, Szymanski W, Braun P, Braun KH, Ott T.   Plasma Membranes Are Subcompartmentalized into a Plethora of Coexisting and Diverse Microdomains in Arabidopsis and Nicotiana benthamiana.   Plant Cell   2014 -4 -8   26(4)   1698-1711   24714763   10.1105/tpc.114.124446  
Arabidopsis / Cultured plant cells, genes   pss10001~pss10006   30785   Jin H, Liu B, Luo L, Feng D, Wang P, Liu J, Da Q, He Y, Qi K, Wang J, Wang HB.   HYPERSENSITIVE TO HIGH LIGHT1 interacts with LOW QUANTUM YIELD OF PHOTOSYSTEM II1 and functions in protection of photosystem II from photodamage in Arabidopsis.   Plant Cell   2014 -3 -19   26(3)   1213-29   24632535   10.1105/tpc.113.122424  
Arabidopsis / Cultured plant cells, genes   pst15710, pst15714   30755   Zhong L, Zhou W, Wang H, Ding S, Lu Q, Wen X, Peng L, Zhang L, Lu C.   Chloroplast small heat shock protein HSP21 interacts with plastid nucleoid protein pTAC5 and is essential for chloroplast development in Arabidopsis under heat stress.   Plant Cell   2013 -8 -8   25(8)   2925-43   23922206   10.1105/tpc.113.111229  
Arabidopsis / Cultured plant cells, genes   pda02355   30750   Christ B, Süssenbacher I, Moser S, Bichsel N, Egert A, Müller T, Kräutler B, Hörtensteiner S.   Cytochrome P450 CYP89A9 is involved in the formation of major chlorophyll catabolites during leaf senescence in Arabidopsis.   Plant Cell   2013 -6 -1   25(5)   1868-80   23723324   10.1105/tpc.113.112151  
Arabidopsis / Cultured plant cells, genes   pda05283   30730   Träger C, Rosenblad MA, Ziehe D, Garcia-Petit C, Schrader L, Kock K, Richter CV, Klinkert B, Narberhaus F, Herrmann C, Hofmann E, Aronsson H, Schünemann D.   Evolution from the prokaryotic to the higher plant chloroplast signal recognition particle: the signal recognition particle RNA is conserved in plastids of a wide range of photosynthetic organisms.   Plant Cell   2013 -1 -1   24(12)   4819-36   23275580   10.1105/tpc.112.102996  
Arabidopsis / Cultured plant cells, genes   pst13725   28100   Perea-Resa C, Hernández-Verdeja T, López-Cobollo R, del Mar Castellano M, Salinas J.   LSM proteins provide accurate splicing and decay of selected transcripts to ensure normal Arabidopsis development.   Plant Cell   2012 -12 -12   24(12)   4930-47   23221597   10.1105/tpc.112.103697  
Arabidopsis / Cultured plant cells, genes   pst16025   28089   Álvarez C, García I, Moreno I, Pérez-Pérez ME, Crespo JL, Romero LC, Gotor C.   Cysteine-generated sulfide in the cytosol negatively regulates autophagy and modulates the transcriptional profile in Arabidopsis.   Plant Cell   2012 -11 -13   24(11)   4621-34   23144183   10.1105/tpc.112.105403  
Arabidopsis / Cultured plant cells, genes   pst17018, pst20504, pst00432, pst13957   28117   Rast MI, Simon R.   Arabidopsis JAGGED LATERAL ORGANS acts with ASYMMETRIC LEAVES2 to coordinate KNOX and PIN expression in shoot and root meristems.   Plant Cell   2012 -7 -24   24(7)   2917-33   22822207   10.1105/tpc.112.099978  
Prokaryotes E. coli   JW0761-KC   35463   Cobessi D, Dumas R, Pautre V, Meinguet C, Ferrer JL, Alban C.   Biochemical and structural characterization of the Arabidopsis bifunctional enzyme dethiobiotin synthetase-diaminopelargonic acid aminotransferase: evidence for substrate channeling in biotin synthesis.   Plant Cell   2012 -4   24(4)   1608-25   22547782   10.1105/tpc.112.097675  
Prokaryotes E. coli   JD23420(uraA)   35455   Witz S, Jung B, Fürst S, Möhlmann T.   De novo pyrimidine nucleotide synthesis mainly occurs outside of plastids, but a previously undiscovered nucleobase importer provides substrates for the essential salvage pathway in Arabidopsis.   Plant Cell   2012 -4   24(4)   1549-59   22474184   10.1105/tpc.112.096743  
Arabidopsis / Cultured plant cells, genes   pda20340   28112   Bjerkan KN, Jung-Roméo S, Jürgens G, Genschik P, Grini PE.   Arabidopsis WD repeat domain55 Interacts with DNA damaged binding protein1 and is required for apical patterning in the embryo.   Plant Cell   2012 -3 -27   24(3)   1013-33   22447688   10.1105/tpc.111.089425  
Arabidopsis / Cultured plant cells, genes   pda01628   28109   Singh P, Kuo YC, Mishra S, Tsai CH, Chien CC, Chen CW, Desclos-Theveniau M, Chu PW, Schulze B, Chinchilla D, Boller T, Zimmerli L.   The lectin receptor kinase-VI.2 is required for priming and positively regulates Arabidopsis pattern-triggered immunity.   Plant Cell   2012 -3 -20   24(3)   1256-70   22427336   10.1105/tpc.112.095778  
Lotus / Glycine   G. max B01151, L. japonicus Gifu B-129   30981   Bunsupa S, Katayama K, Ikeura E, Oikawa A, Toyooka K, Saito K, Yamazaki M.   Lysine decarboxylase catalyzes the first step of quinolizidine alkaloid biosynthesis and coevolved with alkaloid production in leguminosae.   Plant Cell   2012 -3   24(3)   1202-16   22415272   10.1105/tpc.112.095885  
Arabidopsis / Cultured plant cells, genes   pda07343   21131   Kiba T, Feria-Bourrellier AB, Lafouge F, Lezhneva L, Boutet-Mercey S, Orsel M, Bréhaut V, Miller A, Daniel-Vedele F, Sakakibara H, Krapp A.   The Arabidopsis nitrate transporter NRT2.4 plays a double role in roots and shoots of nitrogen-starved plants.   Plant Cell   2012 -1 -10   24(1)   245-58   22227893   10.1105/tpc.111.092221  
Arabidopsis / Cultured plant cells, genes   pst15307   39038   Iwata E, Ikeda S, Matsunaga S, Kurata M, Yoshioka Y, Criqui MC, Genschik P, Ito M.   GIGAS CELL1, a novel negative regulator of the anaphase-promoting complex/cyclosome, is required for proper mitotic progression and cell fate determination in Arabidopsis.   Plant Cell   2011 -12 -15   23(12)   4382-93   22167058   10.1105/tpc.111.092049  
Rice   Induced mutation lines   36150   Tsuda K, Ito Y, Sato Y, Kurata N.   Positive autoregulation of a KNOX gene is essential for shoot apical meristem maintenance in rice.   Plant Cell   2011 -12   23(12)   4368-81   22207572   10.1105/tpc.111.090050  
Arabidopsis / Cultured plant cells, genes   pdx93940, pdy29091, pdy30584, pdz29685, pdz82...   15327   Santelia D, Kötting O, Seung D, Schubert M, Thalmann M, Bischof S, Meekins DA, Lutz A, Patron N, Gentry MS, Allain FH, Zeeman SC.   The phosphoglucan phosphatase like sex Four2 dephosphorylates starch at the C3-position in Arabidopsis.   Plant Cell   2011 -11 -22   23(11)   4096-111   22100529   10.1105/tpc.111.092155  
Arabidopsis / Cultured plant cells, genes   pda09666   12341   Stoppel R, Lezhneva L, Schwenkert S, Torabi S, Felder S, Meierhoff K, Westhoff P, Meurer J.   Recruitment of a ribosomal release factor for light- and stress-dependent regulation of petB transcript stability in Arabidopsis chloroplasts.   Plant Cell   2011 -7 -21   23(7)   2680-95   21771930   10.1105/tpc.111.085324  
Arabidopsis / Cultured plant cells, genes   pdx36441, pdx38715, pdx39980, pdz61236, p...   12333   Reinhold H, Soyk S, Simková K, Hostettler C, Marafino J, Mainiero S, Vaughan CK, Monroe JD, Zeeman SC.   β-amylase-like proteins function as transcription factors in Arabidopsis, controlling shoot growth and development.   Plant Cell   2011 -4 -14   23(4)   1391-403   21487098   10.1105/tpc.110.081950  
Arabidopsis / Cultured plant cells, genes   pda04478   11412   Wang J, Ding Y, Wang J, Hillmer S, Miao Y, Lo SW, Wang X, Robinson DG, Jiang L.   EXPO, an exocyst-positive organelle distinct from multivesicular endosomes and autophagosomes, mediates cytosol to cell wall exocytosis in Arabidopsis and tobacco cells.   Plant Cell   2011 -1 -5   22(12)   4009-30   21193573   10.1105/tpc.110.080697  
Barley   NA   12008   Klaus F. X. Mayer, Mihaela Martis, Pete E. Hedley, Hana Šimková, Hui Liu, Jenny A. Morris, Burkhard Steuernagel, Stefan Taudien, Stephan Roessner, Heidrun Gundlach, Marie Kubaláková3, Pavla Suchánková, Florent Murat, Marius Felder, Andreas Graner, Jerome Salse, Takashi Endo, Hiroaki Sakai, Tsuyoshi Tanaka, Takeshi Itoh, Kazuhiro Sato, Matthias Platzer, Takashi Matsumoto, Uwe Scholz, Jaroslav Doležel, Robbie Waugh, Nils Stein   Unlocking an archetypal 5.1 Gb Triticeae genome by barley chromosomal genomics   Plant Cell   2011   23   1249-1263      
Rice   Induced Mutation Lines   12611   Onda Y, Nagamine A, Sakurai M, Kumamaru T, Ogawa M, Kawagoe Y.   Distinct roles of protein disulfide isomerase and P5 sulfhydryl oxidoreductases in multiple pathways for oxidation of structurally diverse storage proteins in rice.   Plant Cell   2011 -1   23(1)   210-23   21278127   10.1105/tpc.110.079509  
Rice   Induced mutation line   47779   She KC, Kusano H, Koizumi K, Yamakawa H, Hakata M, Imamura T, Fukuda M, Naito N, Tsurumaki Y, Yaeshima M, Tsuge T, Matsumoto K, Kudoh M, Itoh E, Kikuchi S, Kishimoto N, Yazaki J, Ando T, Yano M, Aoyama T, Sasaki T, Satoh H, Shimada H.   A novel factor FLOURY ENDOSPERM2 is involved in regulation of rice grain size and starch quality.   Plant Cell   2010 -10   22(10)   3280-94   20889913   10.1105/tpc.109.070821  
Arabidopsis / Cultured plant cells, genes   pda17320   11404   Schatlowski N, Stahl Y, Hohenstatt ML, Goodrich J, Schubert D.   The CURLY LEAF interacting protein BLISTER controls expression of polycomb-group target genes and cellular differentiation of Arabidopsis thaliana.   Plant Cell   2010 -7 -22   22(7)   2291-305   20647345   10.1105/tpc.109.073403  
Arabidopsis / Cultured plant cells, genes   pdp20423   11400   Vidali L, Burkart GM, Augustine RC, Kerdavid E, Tüzel E, Bezanilla M.   Myosin XI is essential for tip growth in Physcomitrella patens.   Plant Cell   2010 -6 -8   22(6)   1868-82   20525854   10.1105/tpc.109.073288  
Arabidopsis / Cultured plant cells, genes   pda06063, pda12297   6169   Frei dit Frey N, Muller P, Jammes F, Kizis D, Leung J, Perrot-Rechenmann C, Bianchi MW.   The RNA binding protein Tudor-SN is essential for stress tolerance and stabilizes levels of stress-responsive mRNAs encoding secreted proteins in Arabidopsis.   Plant Cell   2010 -5 -21   22(5)   1575-91   20484005   10.1105/tpc.109.070680  
Lotus / Glycine   Miyakojima MG-20   6945   Takos A, Lai D, Mikkelsen L, Abou Hachem M, Shelton D, Motawia MS, Olsen CE, Wang TL, Martin C, Rook F.   Genetic screening identifies cyanogenesis-deficient mutants of Lotus japonicus and reveals enzymatic specificity in hydroxynitrile glucoside metabolism.   Plant Cell   2010 -5   22(5)   1605-19   20453117   10.1105/tpc.109.073502  
Algae   NIES-3377   29670   Fujiwara T, Kuroiwa H, Yagisawa F, Ohnuma M, Yoshida Y, Yoshida M, Nishida K, Misumi O, Watanabe S, Tanaka K, Kuroiwa T.   The coiled-coil protein VIG1 is essential for tethering vacuoles to mitochondria during vacuole inheritance of Cyanidioschyzon merolae.   Plant Cell   2010 -3   22(3)   772-81   20348431   10.1105/tpc.109.070227  
Rice   HO708, HO709, HO716   6982   Whipple CJ, Hall DH, DeBlasio S, Taguchi-Shiobara F, Schmidt RJ, Jackson DP.   A conserved mechanism of bract suppression in the grass family.   Plant Cell   2010 -3   22(3)   565-78   20305121   10.1105/tpc.109.073536  
Rice, Information   Oryzabase   5843   Whipple CJ, Hall DH, DeBlasio S, Taguchi-Shiobara F, Schmidt RJ, Jackson DP.   A conserved mechanism of bract suppression in the grass family.   Plant Cell   2010 -3   22(3)   565-78   20305121   10.1105/tpc.109.073536  
Arabidopsis / Cultured plant cells, genes   pda   6291   Wang H, Zhu Y, Fujioka S, Asami T, Li J, Li J.   Regulation of Arabidopsis brassinosteroid signaling by atypical basic helix-loop-helix proteins.   Plant Cell   2009 -12 -22   21(12)   3781-91   20023194   10.1105/tpc.109.072504  
Arabidopsis / Cultured plant cells, genes   pst15064   6289   Peng L, Fukao Y, Fujiwara M, Takami T, Shikanai T.   Efficient operation of NAD(P)H dehydrogenase requires supercomplex formation with photosystem I via minor LHCI in Arabidopsis.   Plant Cell   2009 -11 -12   21(11)   3623-40   19903870   10.1105/tpc.109.068791  
Arabidopsis / Cultured plant cells, genes   pdp06309   4836   Brownfield L, Hafidh S, Durbarry A, Khatab H, Sidorova A, Doerner P, Twell D.   Arabidopsis DUO POLLEN3 is a key regulator of male germline development and embryogenesis.   Plant Cell   2009 -7 -30   21(7)   1940-56   19638475   10.1105/tpc.109.066373  
Arabidopsis / Cultured plant cells, genes   pda12897, pda14306   4830   Karim MR, Hirota A, Kwiatkowska D, Tasaka M, Aida M.   A role for Arabidopsis PUCHI in floral meristem identity and bract suppression.   Plant Cell   2009 -6 -2   21(5)   1360-72   19482972   10.1105/tpc.109.067025  
Arabidopsis / Cultured plant cells, genes   pdz37649   4823   Zeng CJ, Lee YR, Liu B.   The WD40 repeat protein NEDD1 functions in microtubule organization during cell division in Arabidopsis thaliana.   Plant Cell   2009 -4 -23   21(4)   1129-40   19383896   10.1105/tpc.109.065953  
Arabidopsis / Cultured plant cells, genes   pda03231   4821   Schelbert S, Aubry S, Burla B, Agne B, Kessler F, Krupinska K, Hörtensteiner S.   Pheophytin pheophorbide hydrolase (pheophytinase) is involved in chlorophyll breakdown during leaf senescence in Arabidopsis.   Plant Cell   2009 -3 -24   21(3)   767-85   19304936   10.1105/tpc.108.064089  
Lotus / Glycine   Lotus japonicus   4681   Yokota K, Fukai E, Madsen LH, Jurkiewicz A, Rueda P, Radutoiu S, Held M, Hossain MS, Szczyglowski K, Morieri G, Oldroyd GE, Downie JA, Nielsen MW, Rusek AM, Sato S, Tabata S, James EK, Oyaizu H, Sandal N, Stougaard J.   Rearrangement of actin cytoskeleton mediates invasion of Lotus japonicus roots by Mesorhizobium loti.   Plant Cell   2009 -1   21(1)   267-84   19136645   10.1105/tpc.108.063693  
Arabidopsis / Cultured plant cells, genes   pda00682   4034   Linka N, Theodoulou FL, Haslam RP, Linka M, Napier JA, Neuhaus HE, Weber AP.   Peroxisomal ATP import is essential for seedling development in Arabidopsis thaliana.   Plant Cell   2008 -12 -17   20(12)   3241-57   19073763   10.1105/tpc.108.062042  
Arabidopsis / Cultured plant cells, genes   pda08789,pda09605   4032   Smertenko AP, Kaloriti D, Chang HY, Fiserova J, Opatrny Z, Hussey PJ.   The C-terminal variable region specifies the dynamic properties of Arabidopsis microtubule-associated protein MAP65 isotypes.   Plant Cell   2008 -12 -9   20(12)   3346-58   19060108   10.1105/tpc.108.063362  
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