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Species Resource name RRC ID Author Title Journal Published Volume Pages Pubmed ID DOI
Yeast   BYP7373   47292   Kitamura K, Kinsui EZ, Abe F.   Critical role of the proton-dependent oligopeptide transporter (POT) in the cellular uptake of the peptidyl nucleoside antibiotic, blasticidin S.   Biochim. Biophys. Acta   2017 -2   1864(2)   393-398   27916534   10.1016/j.bbamcr.2016.11.030  
DNA material   pCMFlag_hsGATA1 (RDB06753)   45608   Nishino T, Matsunaga R, Jikihara H, Uchida M, Maeda A, Qi G, Abe T, Kiyonari H, Tashiro S, Inagaki-Ohara K, Shimamoto F, Konishi H.   Antagonizing effect of CLPABP on the function of HuR as a regulator of ARE-containing leptin mRNA stability and the effect of its depletion on obesity in old male mouse.   Biochim. Biophys. Acta   2016 -9 -9       27616329   10.1016/j.bbalip.2016.09.006  
Drosophila   1063R-1,10844R-3,10792R-1,9533R-2   40035   Murmu MS, Martin JR.   Interaction between cAMP and intracellular Ca(2+)-signaling pathways during odor-perception and adaptation in Drosophila.   Biochim. Biophys. Acta   2016 -9   1863(9)   2156-74   27212269   10.1016/j.bbamcr.2016.05.014  
Yeast   gtow6000   36500   Umekawa M, Ujihara M, Makishima K, Yamamoto S, Takematsu H, Wakayama M.   The signaling pathways underlying starvation-induced upregulation of α-mannosidase Ams1 in Saccharomyces cerevisiae.   Biochim. Biophys. Acta   2016 -6   1860(6)   1192-201   26947009   10.1016/j.bbagen.2016.02.018  
Mice   C57BL/6-Tg(CAG-flpe)36Ito/ItoRbrc(RBRC01834)   36684   Sugimoto M, Shimizu Y, Zhao S, Ukon N, Nishijima K, Wakabayashi M, Yoshioka T, Higashino K, Numata Y, Okuda T, Tamaki N, Hanamatsu H, Igarashi Y, Kuge Y.   Characterization of the role of sphingomyelin synthase 2 in glucose metabolism in whole-body and peripheral tissues in mice.   Biochim. Biophys. Acta   2016 -5 -3       27151272   10.1016/j.bbalip.2016.04.019  
Mice   B6.129P2-Nfe2l2<tm1Mym>/MymRbrc(RBRC01390)   36042   Marques L, Negre-Salvayre A, Costa L, Canonne-Hergaux F.   Iron gene expression profile in atherogenic Mox macrophages.   Biochim. Biophys. Acta   2016 -3 -10       26972048   10.1016/j.bbadis.2016.03.004  
Yeast   BY644   35165   Sonkar A, Yadav S, Ahmed S.   Cleavage and polyadenylation factor, Rna14 is an essential protein required for the maintenance of genomic integrity in fission yeast Schizosaccharomyces pombe.   Biochim. Biophys. Acta   2016 -2   1863(2)   189-97   26581324   10.1016/j.bbamcr.2015.11.007  
Algae   NIES-2095   37144   Nozue S, Mukuno A, Tsuda Y, Shiina T, Terazima M, Kumazaki S.   Characterization of thylakoid membrane in a heterocystous cyanobacterium and green alga with dual-detector fluorescence lifetime imaging microscopy with a systematic change of incident laser power.   Biochim. Biophys. Acta   2016 -1   1857(1)   46-59   26474523   10.1016/j.bbabio.2015.10.003  
Human and Animal Cells   MC3T3-E1(RCB1126)   37903   Inoue K, Imai Y.   Fatostatin, an SREBP inhibitor, prevented RANKL-induced bone loss by suppression of osteoclast differentiation.   Biochim. Biophys. Acta   2015 -11   1852(11)   2432-41   26319416   10.1016/j.bbadis.2015.08.018  
Human and Animal Cells   THP-1(RCB1189), 293(RCB1637)   37895   Nagahama M, Seike S, Shirai H, Takagishi T, Kobayashi K, Takehara M, Sakurai J.   Role of P2X7 receptor in Clostridium perfringens beta-toxin-mediated cellular injury.   Biochim. Biophys. Acta   2015 -11   1850(11)   2159-67   26299247   10.1016/j.bbagen.2015.08.011  
Human and Animal Cells     38139   Ueda T, Ito S, Shiraishi T, Taniguchi H, Kayukawa N, Nakanishi H, Nakamura T, Naya Y, Hongo F, Kamoi K, Okihara K, Kawauchi A, Miki T.   PAX2 promoted prostate cancer cell invasion through transcriptional regulation of HGF in an in vitro model.   Biochim. Biophys. Acta   2015 -11   1852(11)   2467-73   26296757   10.1016/j.bbadis.2015.08.008  
Human and Animal Cells     37555   Ikari A, Taga S, Watanabe R, Sato T, Shimobaba S, Sonoki H, Endo S, Matsunaga T, Sakai H, Yamaguchi M, Yamazaki Y, Sugatani J.   Clathrin-dependent endocytosis of claudin-2 by DFYSP peptide causes lysosomal damage in lung adenocarcinoma A549 cells.   Biochim. Biophys. Acta   2015 -10   1848(10 Pt A)   2326-36   26163137   10.1016/j.bbamem.2015.07.003  
C.elegans   tm1704, tm5652   45617   Na H, Zhang P, Chen Y, Zhu X, Liu Y, Liu Y, Xie K, Xu N, Yang F, Yu Y, Cichello S, Mak HY, Wang MC, Zhang H, Liu P.   Identification of lipid droplet structure-like/resident proteins in Caenorhabditis elegans.   Biochim. Biophys. Acta   2015 -10   1853(10 Pt A)   2481-91   26025681   10.1016/j.bbamcr.2015.05.020  
Human and Animal Cells     37057   Komatsu M, Konagaya S, Egawa EY, Iwata H.   Maturation of human iPS cell-derived dopamine neuron precursors in alginate-Ca(2+) hydrogel.   Biochim. Biophys. Acta   2015 -9   1850(9)   1669-75   25952075   10.1016/j.bbagen.2015.04.011  
C.elegans   NA   45661   Yang J, Fong HT, Xie Z, Tan JW, Inoue T.   Direct and positive regulation of Caenorhabditis elegans bed-3 by PRDM1/BLIMP1 ortholog BLMP-1.   Biochim. Biophys. Acta   2015 -9   1849(9)   1229-36   26234645   10.1016/j.bbagrm.2015.07.012  
Human and Animal Cells   293(RCB1637)   36779   Kamada Y, Kusakabe T, Sugimoto Y.   Amyloidogenic lysozymes accumulate in the endoplasmic reticulum accompanied by the augmentation of ER stress signals.   Biochim. Biophys. Acta   2015 -6   1850(6)   1107-19   25659958   10.1016/j.bbagen.2015.01.018  
Human and Animal Cells     45331   Konagaya S, Iwata H.   Microencapsulation of dopamine neurons derived from human induced pluripotent stem cells.   Biochim. Biophys. Acta   2015 -1   1850(1)   22-32   25281770   10.1016/j.bbagen.2014.09.025  
DNA material, C.intestinalis / (O.japonicus)   Ciona intestinalis EST Clones cibd016c12, ciad062k07,...   31030   Gospodaryov DV, Lushchak OV, Rovenko BM, Perkhulyn NV, Gerards M, Tuomela T, Jacobs HT.   Ciona intestinalis NADH dehydrogenase NDX confers stress-resistance and extended lifespan on Drosophila.   Biochim. Biophys. Acta   2014 -11   1837(11)   1861-9   25124484   10.1016/j.bbabio.2014.08.001  
Human and Animal Cells     45133   Okamura H, Yang D, Yoshida K, Teramachi J, Haneji T.   Reduction of PP2A Cα stimulates adipogenesis by regulating the Wnt/GSK-3β/β-catenin pathway and PPARγ expression.   Biochim. Biophys. Acta   2014 -11   1843(11)   2376-84   24949891   10.1016/j.bbamcr.2014.06.008  
Human and Animal Cells     45186   Matsui H, Hozumi Y, Tanaka T, Okada M, Nakano T, Suzuki Y, Iseki K, Kakehata S, Topham MK, Goto K.   Role of the N-terminal hydrophobic residues of DGKε in targeting the endoplasmic reticulum.   Biochim. Biophys. Acta   2014 -10   1842(10)   1440-50   25048194   10.1016/j.bbalip.2014.07.007  
C.elegans   tm4178   45892   Yang F, Gao Y, Li Z, Chen L, Xia Z, Xu T, Qin Y.   Mitochondrial EF4 links respiratory dysfunction and cytoplasmic translation in Caenorhabditis elegans.   Biochim. Biophys. Acta   2014 -10   1837(10)   1674-83   24837196   10.1016/j.bbabio.2014.05.353  
Zebrafish   isl1:GFP/rw0   33639   Huang MS, Wang TK, Liu YW, Li YT, Chi TH, Chou CW, Hsieh M.   Roles of carbonic anhydrase 8 in neuronal cells and zebrafish.   Biochim. Biophys. Acta   2014 -9   1840(9)   2829-42   24794067   10.1016/j.bbagen.2014.04.017  
Zebrafish   isl1:GFP/rw0   33638   Huang MS, Wang TK, Liu YW, Li YT, Chi TH, Chou CW, Hsieh M.   Roles of carbonic anhydrase 8 in neuronal cells and zebrafish.   Biochim. Biophys. Acta   2014 -9   1840(9)   2829-42   24794067   10.1016/j.bbagen.2014.04.017  
Human and Animal Cells     45113   Ikari A, Watanabe R, Sato T, Taga S, Shimobaba S, Yamaguchi M, Yamazaki Y, Endo S, Matsunaga T, Sugatani J.   Nuclear distribution of claudin-2 increases cell proliferation in human lung adenocarcinoma cells.   Biochim. Biophys. Acta   2014 -9   1843(9)   2079-88   24907662   10.1016/j.bbamcr.2014.05.017  
Human and Animal Cells     45085   Maeda-Sano K, Gotoh M, Morohoshi T, Someya T, Murofushi H, Murakami-Murofushi K.   Cyclic phosphatidic acid and lysophosphatidic acid induce hyaluronic acid synthesis via CREB transcription factor regulation in human skin fibroblasts.   Biochim. Biophys. Acta   2014 -9   1841(9)   1256-63   24845645   10.1016/j.bbalip.2014.05.004  
Human and Animal Cells     44714   Ishihara T, Kakiya K, Takahashi K, Miwa H, Rokushima M, Yoshinaga T, Tanaka Y, Ito T, Togame H, Takemoto H, Amano M, Iwasaki N, Minami A, Nishimura S.   Discovery of novel differentiation markers in the early stage of chondrogenesis by glycoform-focused reverse proteomics and genomics.   Biochim. Biophys. Acta   2014 -1   1840(1)   645-55   24161698   10.1016/j.bbagen.2013.10.027  
Human and Animal Cells     44622   Sánchez-Felipe L, Villar E, Muñoz-Barroso I.   Entry of Newcastle Disease Virus into the host cell: role of acidic pH and endocytosis.   Biochim. Biophys. Acta   2014 -1   1838(1 Pt B)   300-9   23994097   10.1016/j.bbamem.2013.08.008  
Drosophila   1009R-2,1009R-3   28073   Kruppa AJ, Ott S, Chandraratna DS, Irving JA, Page RM, Speretta E, Seto T, Camargo LM, Marciniak SJ, Lomas DA, Crowther DC.   Suppression of Aβ toxicity by puromycin-sensitive aminopeptidase is independent of its proteolytic activity.   Biochim. Biophys. Acta   2013 -12   1832(12)   2115-26   23911349   10.1016/j.bbadis.2013.07.019  
Human and Animal Cells     44623   Uyama T, Inoue M, Okamoto Y, Shinohara N, Tai T, Tsuboi K, Inoue T, Tokumura A, Ueda N.   Involvement of phospholipase A/acyltransferase-1 in N-acylphosphatidylethanolamine generation.   Biochim. Biophys. Acta   2013 -12   1831(12)   1690-701   23994608   10.1016/j.bbalip.2013.08.017  
Mice   GFP-LC3#53(RBRC00806)   27892   Xu L, Kanasaki M, He J, Kitada M, Nagao K, Jinzu H, Noguchi Y, Maegawa H, Kanasaki K, Koya D.   Ketogenic essential amino acids replacement diet ameliorated hepatosteatosis with altering autophagy-associated molecules.   Biochim. Biophys. Acta   2013 -10   1832(10)   1605-12   23669346   10.1016/j.bbadis.2013.05.003  
Human and Animal Cells     44471   Nakaya K, Ayaori M, Uto-Kondo H, Sotherden GM, Nishida T, Katamoto H, Miura Y, Takiguchi S, Yakushiji E, Iizuka M, Ogura M, Sasaki M, Yogo M, Komatsu T, Adachi T, Maruyama C, Ikewaki K.   Overexpression of stearoyl-coenzyme A desaturase 1 in macrophages promotes reverse cholesterol transport.   Biochim. Biophys. Acta   2013 -8   1831(8)   1402-11   23747827   10.1016/j.bbalip.2013.05.009  
Human and Animal Cells     44330   Tong L, Png E, Aihua H, Yong SS, Yeo HL, Riau A, Mendoz E, Chaurasia SS, Lim CT, Yiu TW, Iismaa SE.   Molecular mechanism of transglutaminase-2 in corneal epithelial migration and adhesion.   Biochim. Biophys. Acta   2013 -6   1833(6)   1304-15   23466867   10.1016/j.bbamcr.2013.02.030  
Silkworms     30572   Yamamoto K, Higashiura A, Suzuki M, Aritake K, Urade Y, Uodome N, Nakagawa A.   Crystal structure of a Bombyx mori sigma-class glutathione transferase exhibiting prostaglandin E synthase activity.   Biochim. Biophys. Acta   2013 -3 -6   1830(6)   3711-8   23458683   10.1016/j.bbagen.2013.02.021  
Prokaryotes E. coli   NA   35587   Ollivierre JN, Sikora JL, Beuning PJ.   Dimer exchange and cleavage specificity of the DNA damage response protein UmuD.   Biochim. Biophys. Acta   2013 -2   1834(2)   611-20   23220418   10.1016/j.bbapap.2012.11.008  
Human and Animal Cells     44113   Ma Y, Semba S, Khan RI, Bochimoto H, Watanabe T, Fujiya M, Kohgo Y, Liu Y, Taniguchi T.   Focal adhesion kinase regulates intestinal epithelial barrier function via redistribution of tight junction.   Biochim. Biophys. Acta   2013 -1   1832(1)   151-9   23064287   10.1016/j.bbadis.2012.10.006  
Human and Animal Cells     43981   Kovacs-Nolan J, Zhang H, Ibuki M, Nakamori T, Yoshiura K, Turner PV, Matsui T, Mine Y.   The PepT1-transportable soy tripeptide VPY reduces intestinal inflammation.   Biochim. Biophys. Acta   2012 -11   1820(11)   1753-63   22842481   10.1016/j.bbagen.2012.07.007  
Arabidopsis / Cultured plant cells, genes   pda01364, pda10876   21141   Tsugama D, Liu H, Liu S, Takano T.   Arabidopsis heterotrimeric G protein β subunit interacts with a plasma membrane 2C-type protein phosphatase, PP2C52.   Biochim. Biophys. Acta   2012 -10 -13   1823(12)   2254-60   23058975   10.1016/j.bbamcr.2012.10.001  
Human and Animal Cells     43935   Miura Y, Sakurai Y, Endo T.   O-GlcNAc modification affects the ATM-mediated DNA damage response.   Biochim. Biophys. Acta   2012 -10   1820(10)   1678-85   22759405   10.1016/j.bbagen.2012.06.013  
C.elegans   NA   46024   Baylis HA, Vázquez-Manrique RP.   Genetic analysis of IP3 and calcium signalling pathways in C. elegans.   Biochim. Biophys. Acta   2012 -8   1820(8)   1253-68   22146231   10.1016/j.bbagen.2011.11.009  
Algae   NIES-2114   37132   Katoh H, Furukawa J, Tomita-Yokotani K, Nishi Y.   Isolation and purification of an axenic diazotrophic drought-tolerant cyanobacterium, Nostoc commune, from natural cyanobacterial crusts and its utilization for field research on soils polluted with radioisotopes.   Biochim. Biophys. Acta   2012 -8   1817(8)   1499-505   22417797   10.1016/j.bbabio.2012.02.039  
Yeast, Medaka   BY2778 full length cDNA (olvl8b03)   20944   Mizutani K, Toyoda M, Otake Y, Yoshioka S, Takahashi N, Mikami B.   Structural and functional characterization of recombinant medaka fish alpha-amylase expressed in yeast Pichia pastoris.   Biochim. Biophys. Acta   2012 -8   1824(8)   954-62   22613096   10.1016/j.bbapap.2012.05.005  
Drosophila     21971   Riemensperger T, Pech U, Dipt S, Fiala A.   Optical calcium imaging in the nervous system of Drosophila melanogaster.   Biochim. Biophys. Acta   2012 -8   1820(8)   1169-78   22402253   10.1016/j.bbagen.2012.02.013  
Algae   NIES-547   21566   Watanabe M, Sato M, Kondo K, Narikawa R, Ikeuchi M.   Phycobilisome model with novel skeleton-like structures in a glaucocystophyte Cyanophora paradoxa.   Biochim. Biophys. Acta   2012 -8   1817(8)   1428-35   22172737   10.1016/j.bbabio.2011.11.013  
Human and Animal Cells     43811   Ikari A, Sato T, Watanabe R, Yamazaki Y, Sugatani J.   Increase in claudin-2 expression by an EGFR/MEK/ERK/c-Fos pathway in lung adenocarcinoma A549 cells.   Biochim. Biophys. Acta   2012 -6   1823(6)   1110-8   22546605   10.1016/j.bbamcr.2012.04.005  
Silkworms     30573   Yamamoto K, Usuda K, Kakuta Y, Kimura M, Higashiura A, Nakagawa A, Aso Y, Suzuki M.   Structural basis for catalytic activity of a silkworm Delta-class glutathione transferase.   Biochim. Biophys. Acta   2012 -5 -15   1820(10)   1469-74   22579926   10.1016/j.bbagen.2012.04.022  
Human and Animal Cells     43681   Ayaori M, Yakushiji E, Ogura M, Nakaya K, Hisada T, Uto-Kondo H, Takiguchi S, Terao Y, Sasaki M, Komatsu T, Iizuka M, Yogo M, Uehara Y, Kagechika H, Nakanishi T, Ikewaki K.   Retinoic acid receptor agonists regulate expression of ATP-binding cassette transporter G1 in macrophages.   Biochim. Biophys. Acta   2012 -4   1821(4)   561-72   22353356   10.1016/j.bbalip.2012.02.004  
C.elegans   tm2805   46442   Sherman TA, Rongali SC, Matthews TA, Pfeiffer J, Nehrke K.   Identification of a nuclear carbonic anhydrase in Caenorhabditis elegans.   Biochim. Biophys. Acta   2012 -4   1823(4)   808-17   22245567   10.1016/j.bbamcr.2011.12.014  
General Microbes   JCM 9340   47563   Crouch LI, Jones MR   Cross-species investigation of the functions of the Rhodobacter PufX polypeptide and the composition of the RC-LH1 core complex.   Biochim. Biophys. Acta   2012   1817   336-352   22079525   10.1016/j.bbabio.2011.10.009  
Algae   NIES-71,NIES-281,NIES-696,NIES-837   20886   Mizoguchi T, Kimura Y, Yoshitomi T, Tamiaki H.   The stereochemistry of chlorophyll-c₃ from the haptophyte Emiliania huxleyi: the (13²R)-enantiomers of chlorophylls-c are exclusively selected as the photosynthetically active pigments in chromophyte algae.   Biochim. Biophys. Acta   2011 -11   1807(11)   1467-73   21806961   10.1016/j.bbabio.2011.07.008  
Prokaryotes E. coli   NA   35399   Updegrove TB, Wartell RM.   The influence of Escherichia coli Hfq mutations on RNA binding and sRNA•mRNA duplex formation in rpoS riboregulation.   Biochim. Biophys. Acta   2011 -10   1809(10)   532-40   21889623   10.1016/j.bbagrm.2011.08.006  
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