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Species Resource name RRC ID Author Title Journal Published Volume Pages Pubmed ID DOI
DNA material   pGL4-phPLAU (RDB07487); pGL4-phSERPINE1(PAI-1) (RDB07461...   49319   Resmini G, Rizzo S, Franchin C, Zanin R, Penzo C, Pegoraro S, Ciani Y, Piazza S, Arrigoni G, Sgarra R, Manfioletti G.   HMGA1 regulates the Plasminogen activation system in the secretome of breast cancer cells.   Sci Rep   2017 -9 -20   7(1)   11768   28924209   10.1038/s41598-017-11409-4  
Drosophila   12866R-1   49289   Kim M, Jang D, Yoo E, Oh Y, Sonn JY, Lee J, Ki Y, Son HJ, Hwang O, Lee C, Lim C, Choe J.   Rogdi Defines GABAergic Control of a Wake-promoting Dopaminergic Pathway to Sustain Sleep in Drosophila.   Sci Rep   2017 -9 -14   7(1)   11368   28900300   10.1038/s41598-017-11941-3  
Human and Animal Cells   HeLa/Fucci2(RCB2867)   49348   Sasaki T, Sato Y, Higashiyama T, Sasaki N.   Live imaging reveals the dynamics and regulation of mitochondrial nucleoids during the cell cycle in Fucci2-HeLa cells.   Sci Rep   2017 -9 -14   7(1)   11257   28900194   10.1038/s41598-017-10843-8  
DNA material   MSM/Ms Mouse BAC clone (RDB04214) MSMg01-466J23, MSMg01-047A16.   49316   Okumura K, Saito M, Yoshizawa Y, Munakata H, Isogai E, Miura I, Wakana S, Yamaguchi M, Shitara H, Taya C, Karaplis AC, Kominami R, Wakabayashi Y.   The parathyroid hormone regulates skin tumour susceptibility in mice.   Sci Rep   2017 -9 -13   7(1)   11208   28894263   10.1038/s41598-017-11561-x  
DNA material   NRCD human cDNA clone RBd49C10 (HKR379658)   49261   Bae CR, Hino J, Hosoda H, Arai Y, Son C, Makino H, Tokudome T, Tomita T, Kimura T, Nojiri T, Hosoda K, Miyazato M, Kangawa K.   Overexpression of C-type Natriuretic Peptide in Endothelial Cells Protects against Insulin Resistance and Inflammation during Diet-induced Obesity.   Sci Rep   2017 -8 -31   7(1)   9807   28852070   10.1038/s41598-017-10240-1  
DNA material   CSIV-TRE-RfA-CMV-KT (RDB12876); pCAG-HIVgp (RDB04394...   49256   Ito N, Kii I, Shimizu N, Tanaka H, Shin'ichi T.   Direct reprogramming of fibroblasts into skeletal muscle progenitor cells by transcription factors enriched in undifferentiated subpopulation of satellite cells.   Sci Rep   2017 -8 -16   7(1)   8097   28808339   10.1038/s41598-017-08232-2  
Mice   NC(RBRC01059)   49248   Yang Z, Liu M, Wang W, Wang Y, Cao B, Gao Y, Chen H, Li T.   Pseudolaric acid B attenuates atopic dermatitis-like skin lesions by inhibiting interleukin-17-induced inflammation.   Sci Rep   2017 -8 -13   7(1)   7918   28801611   10.1038/s41598-017-08485-x  
Drosophila   10868R-1,10868R-5   49221   Wu JK, Tai CY, Feng KL, Chen SL, Chen CC, Chiang AS.   Long-term memory requires sequential protein synthesis in three subsets of mushroom body output neurons in Drosophila.   Sci Rep   2017 -8 -5   7(1)   7112   28769066   10.1038/s41598-017-07600-2  
Tomato   TOMJPF00001   49307   Nonaka S, Arai C, Takayama M, Matsukura C, Ezura H.   Efficient increase of ɣ-aminobutyric acid (GABA) content in tomato fruits by targeted mutagenesis.   Sci Rep   2017 -8 -3   7(1)   7057   28765632   10.1038/s41598-017-06400-y  
Human and Animal Cells   iPS-MEF-Ng-20D-17(APS0001)   49346   Nair N, Calle AS, Zahra MH, Prieto-Vila M, Oo AKK, Hurley L, Vaidyanath A, Seno A, Masuda J, Iwasaki Y, Tanaka H, Kasai T, Seno M.   A cancer stem cell model as the point of origin of cancer-associated fibroblasts in tumor microenvironment.   Sci Rep   2017 -7 -30   7(1)   6838   28754894   10.1038/s41598-017-07144-5  
Mice   B6.129P2-Nfe2l2<tm1Mym>/MymRbrc(RBRC01390)   48890   Santarino IB, Viegas MS, Domingues NS, Ribeiro AM, Soares MP, Vieira OV.   Involvement of the p62/NRF2 signal transduction pathway on erythrophagocytosis.   Sci Rep   2017 -7 -21   7(1)   5812   28724916   10.1038/s41598-017-05687-1  
DNA material   pPAL7_GimRET (RDB14203); pGimRET (RDB14204).   48894   Konishi HA, Asai S, Watanabe TM, Yoshimura SH.   In vivo analysis of protein crowding within the nuclear pore complex in interphase and mitosis.   Sci Rep   2017 -7 -20   7(1)   5709   28720791   10.1038/s41598-017-05959-w  
Drosophila   5680R-2   48863   Ren P, Li W, Xue L.   GLYAT regulates JNK-mediated cell death in Drosophila.   Sci Rep   2017 -7 -14   7(1)   5183   28701716   10.1038/s41598-017-05482-y  
Drosophila   32443R-4,32443R-1,5595R-1   48867   Zhang S, Pan C, Lv X, Wu W, Chen H, Wu W, Wu H, Zhang L, Zhao Y.   Repression of Abd-B by Polycomb is critical for cell identity maintenance in adult Drosophila testis.   Sci Rep   2017 -7 -13   7(1)   5101   28698559   10.1038/s41598-017-05359-0  
DNA material   pET28/His6-mCherry-NT-Lys (RDB13499)   48841   Stauffer BB, Cui G, Cottrill KA, Infield DT, McCarty NA.   Bacterial Sphingomyelinase is a State-Dependent Inhibitor of the Cystic Fibrosis Transmembrane conductance Regulator (CFTR).   Sci Rep   2017 -6 -9   7(1)   2931   28592822   10.1038/s41598-017-03103-2  
Drosophila   7035R-3,3412R-1   48858   Chen P, Zhou Z, Yao X, Pang S, Liu M, Jiang W, Jiang J, Zhang Q.   Capping Enzyme mRNA-cap/RNGTT Regulates Hedgehog Pathway Activity by Antagonizing Protein Kinase A.   Sci Rep   2017 -6 -8   7(1)   2891   28588207   10.1038/s41598-017-03165-2  
Human and Animal Cells   409B2(HPS0076)   48843   Ikeda K, Nagata S, Okitsu T, Takeuchi S.   Cell fiber-based three-dimensional culture system for highly efficient expansion of human induced pluripotent stem cells.   Sci Rep   2017 -6 -8   7(1)   2850   28588295   10.1038/s41598-017-03246-2  
DNA material   pENTR4-H1 (RDB04395); CS-RfA-EG (RDB04391); CSI...   47979   Ishibashi M, Neri S, Hashimoto H, Miyashita T, Yoshida T, Nakamura Y, Udagawa H, Kirita K, Matsumoto S, Umemura S, Yoh K, Niho S, Tsuboi M, Masutomi K, Goto K, Ochiai A, Ishii G.   CD200-positive cancer associated fibroblasts augment the sensitivity of Epidermal Growth Factor Receptor mutation-positive lung adenocarcinomas to EGFR Tyrosine kinase inhibitors.   Sci Rep   2017 -4 -22   7   46662   28429795   10.1038/srep46662  
Arabidopsis / Cultured plant cells, genes   rpc00001   48774   Kurita K, Sakamoto T, Yagi N, Sakamoto Y, Ito A, Nishino N, Sako K, Yoshida M, Kimura H, Seki M, Matsunaga S.   Live imaging of H3K9 acetylation in plant cells.   Sci Rep   2017 -4 -19   7   45894   28418019   10.1038/srep45894  
Drosophila     47921   Younus F, Fraser NJ, Coppin CW, Liu JW, Correy GJ, Chertemps T, Pandey G, Maïbèche M, Jackson CJ, Oakeshott JG.   Molecular basis for the behavioral effects of the odorant degrading enzyme Esterase 6 in Drosophila.   Sci Rep   2017 -4 -11   7   46188   28393888   10.1038/srep46188  
Algae   NIES-547   48682   Misumi M, Sonoike K.   Characterization of the influence of chlororespiration on the regulation of photosynthesis in the glaucophyte Cyanophora paradoxa.   Sci Rep   2017 -4 -8   7   46100   28387347   10.1038/srep46100  
Mice   M100366(RBRCGSC0247)   47961   Yamamoto H, Takada T, Yamanashi Y, Ogura M, Masuo Y, Harada-Shiba M, Suzuki H.   VLDL/LDL acts as a drug carrier and regulates the transport and metabolism of drugs in the body.   Sci Rep   2017 -4 -6   7(1)   633   28377633   10.1038/s41598-017-00685-9  
Human and Animal Cells   ACC-MESO-1(RCB2292), ACC-MESO-4(RCB2293)   48066   Tsuji S, Washimi K, Kageyama T, Yamashita M, Yoshihara M, Matsuura R, Yokose T, Kameda Y, Hayashi H, Morohoshi T, Tsuura Y, Yusa T, Sato T, Togayachi A, Narimatsu H, Nagasaki T, Nakamoto K, Moriwaki Y, Misawa H, Hiroshima K, Miyagi Y, Imai K.   HEG1 is a novel mucin-like membrane protein that serves as a diagnostic and therapeutic target for malignant mesothelioma.   Sci Rep   2017 -4 -1   7   45768   28361969   10.1038/srep45768  
Tomato   TOMJPF00001   47770   Ueta R, Abe C, Watanabe T, Sugano SS, Ishihara R, Ezura H, Osakabe Y, Osakabe K.   Rapid breeding of parthenocarpic tomato plants using CRISPR/Cas9.   Sci Rep   2017 -4 -1   7(1)   507   28360425   10.1038/s41598-017-00501-4  
DNA material   Genome Network Project Human cDNA IRAK168O08 (HGY067544...   47938   Kawaguchi K, Uo K, Tanaka T, Komada M.   Tandem UIMs confer Lys48 ubiquitin chain substrate preference to deubiquitinase USP25.   Sci Rep   2017 -3 -23   7   45037   28327663   10.1038/srep45037  
Drosophila   6975R-8   47788   Yun HM, Noh S, Hyun S.   Minocycline treatment suppresses juvenile development and growth by attenuating insulin/TOR signaling in Drosophila animal model.   Sci Rep   2017 -3 -21   7   44724   28317899   10.1038/srep44724  
Human and Animal Cells   RAW 264(RCB0535)   48065   Komiya C, Tanaka M, Tsuchiya K, Shimazu N, Mori K, Furuke S, Miyachi Y, Shiba K, Yamaguchi S, Ikeda K, Ochi K, Nakabayashi K, Hata KI, Itoh M, Suganami T, Ogawa Y.   Antifibrotic effect of pirfenidone in a mouse model of human nonalcoholic steatohepatitis.   Sci Rep   2017 -3 -18   7   44754   28303974   10.1038/srep44754  
Yeast   FY12137   47683   Xiao Q, Zhang C, Li H, Wei B, Wang Y, Huang H, Li Y, Yu G, Liu H, Zhang J, Liu Y, Hu Y, Huang Y.   Identification and functional analysis of the ICK gene family in maize.   Sci Rep   2017 -3 -7   7   43818   28262730   10.1038/srep43818  
Medaka   Kaga (IB833), hatching enzyme   47776   Seki S, Kusano K, Lee S, Iwasaki Y, Yagisawa M, Ishida M, Hiratsuka T, Sasado T, Naruse K, Yoshizaki G.   Production of the medaka derived from vitrified whole testes by germ cell transplantation.   Sci Rep   2017 -3 -4   7   43185   28256523   10.1038/srep43185  
DNA material   B6N Mouse BAC clone (RDB07573): B6Ng01-234K06, B6Ng01-223B06,...   49490   Kato T, Hara S, Goto Y, Ogawa Y, Okayasu H, Kubota S, Tamano M, Terao M, Takada S.   Creation of mutant mice with megabase-sized deletions containing custom-designed breakpoints by means of the CRISPR/Cas9 system.   Sci Rep   2017 -3 -2   7(1)   59   28246396   10.1038/s41598-017-00140-9  
DNA material   CSII-CMV-MCS-IRES2-Bsd (RDB04385)   48813   Sakaue T, Sakakibara I, Uesugi T, Fujisaki A, Nakashiro KI, Hamakawa H, Kubota E, Joh T, Imai YK, Izutani H, Higashiyama S.   The CUL3-SPOP-DAXX axis is a novel regulator of VEGFR2 expression in vascular endothelial cells.   Sci Rep   2017 -2 -22   7   42845   28216678   10.1038/srep42845  
Human and Animal Cells   201B7(HPS0063)   47700   Goparaju SK, Kohda K, Ibata K, Soma A, Nakatake Y, Akiyama T, Wakabayashi S, Matsushita M, Sakota M, Kimura H, Yuzaki M, Ko SB, Ko MS.   Rapid differentiation of human pluripotent stem cells into functional neurons by mRNAs encoding transcription factors.   Sci Rep   2017 -2 -17   7   42367   28205555   10.1038/srep42367  
DNA material, Human and Animal Cells   CS-CDF-EG-PRE (RDB04380); pCAG-HIVgp (RDB04394)...   48814   Inagaki S, Tsutsui H, Suzuki K, Agetsuma M, Arai Y, Jinno Y, Bai G, Daniels MJ, Okamura Y, Matsuda T, Nagai T.   Genetically encoded bioluminescent voltage indicator for multi-purpose use in wide range of bioimaging.   Sci Rep   2017 -2 -17   7   42398   28205521   10.1038/srep42398  
Mice   MSM/Ms(RBRC00209)   47687   Hirose M, Hasegawa A, Mochida K, Matoba S, Hatanaka Y, Inoue K, Goto T, Kaneda H, Yamada I, Furuse T, Abe K, Uenoyama Y, Tsukamura H, Wakana S, Honda A, Ogura A.   CRISPR/Cas9-mediated genome editing in wild-derived mice: generation of tamed wild-derived strains by mutation of the a (nonagouti) gene.   Sci Rep   2017 -2 -15   7   42476   28195201   10.1038/srep42476  
Drosophila   1063R-2   47647   Richhariya S, Jayakumar S, Abruzzi K, Rosbash M, Hasan G.   A pupal transcriptomic screen identifies Ral as a target of store-operated calcium entry in Drosophila neurons.   Sci Rep   2017 -2 -15   7   42586   28195208   10.1038/srep42586  
Arabidopsis / Cultured plant cells, genes   psi00016, psi00017   48766   Wang X, Li J, Ban L, Wu Y, Wu X, Wang Y, Wen H, Chapurin V, Dzyubenko N, Li Z, Wang Z, Gao H.   Functional characterization of a gibberellin receptor and its application in alfalfa biomass improvement.   Sci Rep   2017 -1 -28   7   41296   28128230   10.1038/srep41296  
Algae   NIES-3756   48683   Takeya M, Hirai MY, Osanai T.   Allosteric Inhibition of Phosphoenolpyruvate Carboxylases is Determined by a Single Amino Acid Residue in Cyanobacteria.   Sci Rep   2017 -1 -25   7   41080   28117365   10.1038/srep41080  
Algae   NIES-48   48684   Shimakawa G, Matsuda Y, Nakajima K, Tamoi M, Shigeoka S, Miyake C.   Diverse strategies of O2 usage for preventing photo-oxidative damage under CO2 limitation during algal photosynthesis.   Sci Rep   2017 -1 -21   7   41022   28106164   10.1038/srep41022  
Drosophila   CAS-0004,TBX-0002   47423   Hayashi M, Shinozuka Y, Shigenobu S, Sato M, Sugimoto M, Ito S, Abe K, Kobayashi S.   Conserved role of Ovo in germline development in mouse and Drosophila.   Sci Rep   2017 -1 -7   7   40056   28059165   10.1038/srep40056  
Human and Animal Cells   NOS-1(RCB1032)   47698   Ando T, Kudo Y, Iizuka S, Tsunematsu T, Umehara H, Shrestha M, Matsuo T, Kubo T, Shimose S, Arihiro K, Ogawa I, Ochi M, Takata T.   Ameloblastin induces tumor suppressive phenotype and enhances chemosensitivity to doxorubicin via Src-Stat3 inactivation in osteosarcoma.   Sci Rep   2017 -1 -6   7   40187   28054649   10.1038/srep40187  
DNA material   pSpCas9-mGli3-exon2_sgRNA (RDB15037); pSpCas9-mGl...   48754   Makino S, Fukumura R, Gondo Y.   Illegitimate translation causes unexpected gene expression from on-target out-of-frame alleles created by CRISPR-Cas9.   Sci Rep   2016 -12 -22   6   39608   28000783   10.1038/srep39608  
Human and Animal Cells   253G1(HPS0002)   47694   Numaga-Tomita T, Kitajima N, Kuroda T, Nishimura A, Miyano K, Yasuda S, Kuwahara K, Sato Y, Ide T, Birnbaumer L, Sumimoto H, Mori Y, Nishida M.   TRPC3-GEF-H1 axis mediates pressure overload-induced cardiac fibrosis.   Sci Rep   2016 -12 -20   6   39383   27991560   10.1038/srep39383  
Japanese macaques     48028   Nishi E, Tsutsui K, Imai H.   High maltose sensitivity of sweet taste receptors in the Japanese macaque (Macaca fuscata).   Sci Rep   2016 -12 -17   6   39352   27982108   10.1038/srep39352  
General Microbes   JCM 14847   48530   Okino N, Ito M.   Molecular mechanism for sphingosine-induced Pseudomonas ceramidase expression through the transcriptional regulator SphR.   Sci Rep   2016 -12 -13   6   38797   27941831   10.1038/srep38797  
Wheat   wheat   47967   Saisho D, Takumi S, Matsuoka Y.   Salt tolerance during germination and seedling growth of wild wheat Aegilops tauschii and its impact on the species range expansion.   Sci Rep   2016 -12 -9   6   38554   27929044   10.1038/srep38554  
General Microbes   JCM 15477   48529   Sangal V, Goodfellow M, Jones AL, Schwalbe EC, Blom J, Hoskisson PA, Sutcliffe IC.   Next-generation systematics: An innovative approach to resolve the structure of complex prokaryotic taxa.   Sci Rep   2016 -12 -8   6   38392   27924912   10.1038/srep38392  
Medaka   MR(del2) (MT1050), HdrR-II1 (IB178)   47437   Sakamoto T, Yoshiki M, Takahashi H, Yoshida M, Ogino Y, Ikeuchi T, Nakamachi T, Konno N, Matsuda K, Sakamoto H.   Principal function of mineralocorticoid signaling suggested by constitutive knockout of the mineralocorticoid receptor in medaka fish.   Sci Rep   2016 -11 -30   6   37991   27897263   10.1038/srep37991  
Barley   Haruna Nijo, Golden Promise   47253   Hisano H, Sato K.   Genomic regions responsible for amenability to Agrobacterium-mediated transformation in barley.   Sci Rep   2016 -11 -23   6   37505   27874056   10.1038/srep37505  
Drosophila   8376R-1,GFP-IR-2   47272   Shimada N, Inami S, Sato S, Kitamoto T, Sakai T.   Modulation of light-driven arousal by LIM-homeodomain transcription factor Apterous in large PDF-positive lateral neurons of the Drosophila brain.   Sci Rep   2016 -11 -18   6   37255   27853240   10.1038/srep37255  
Yeast   pGK416   48076   Kaishima M, Ishii J, Matsuno T, Fukuda N, Kondo A.   Expression of varied GFPs in Saccharomyces cerevisiae: codon optimization yields stronger than expected expression and fluorescence intensity.   Sci Rep   2016 -10 -27   6   35932   27782154   10.1038/srep35932  
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