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Species Resource name RRC ID Author Title Journal Published Volume Pages Pubmed ID DOI
C.elegans   tm5867,tm6621   51521   Watts JS, Morton DG, Kemphues KJ, Watts JL.   The biotin-ligating protein BPL-1 is critical for lipid biosynthesis and polarization of the Caenorhabditis elegans embryo.   J. Biol. Chem.   2018 -1 -12   293(2)   610-622   29158261   10.1074/jbc.M117.798553  
DNA material   pCMV-VSV-G (RDB04392)   50029   Segawa K, Kurata S, Nagata S.   The CDC50A extracellular domain is required for forming a functional complex with and chaperoning phospholipid flippases to the plasma membrane.   J. Biol. Chem.   2017 -12 -26       29276178   10.1074/jbc.RA117.000289  
Human and Animal Cells   A172(RCB2530), T98G(RCB1954)   52426   Goji T, Takahara K, Negishi M, Katoh H.   Cystine uptake through the cystine/glutamate antiporter xCT triggers glioblastoma cell death under glucose deprivation.   J. Biol. Chem.   2017 -12 -1   292(48)   19721-19732   29038291   10.1074/jbc.M117.814392  
Human and Animal Cells   293T(RCB2202)   52409   Oda K, Oda T, Matoba Y, Sato M, Irie T, Sakaguchi T.   Structural analysis of the STAT1:STAT2 heterodimer revealed the mechanism of Sendai virus C protein-mediated blockade of type 1 interferon signaling.   J. Biol. Chem.   2017 -12 -1   292(48)   19752-19766   28978648   10.1074/jbc.M117.786285  
C.elegans   tm1146,tm776   51443   Sakamoto T, Imai H.   Hydrogen peroxide produced by superoxide dismutase SOD-2 activates sperm in Caenorhabditis elegans.   J. Biol. Chem.   2017 -9 -8   292(36)   14804-14813   28724632   10.1074/jbc.M117.788901  
DNA material   human Period3(-3.1 to +0.2kb)-luciferase/pENTR-1A (...   51323   Matsumura R, Akashi M.   , a mammalian clock gene.   J. Biol. Chem.   2017 -8 -20   292(39)   16081-16092   28821614   10.1074/jbc.M117.806836  
Yeast   BYP1419   50374   Nomura W, Maeta K, Inoue Y.   .Phosphatidylinositol 3,5-bisphosphate is involved in methylglyoxal-induced activation of the Mpk1 mitogen-activated protein kinase cascade in Saccharomyces cerevisiae   J. Biol. Chem.   2017 -7 -27   292(36)   15039-15048   28743744   10.1074/jbc.M117.791590  
General Microbes   JCM 1254   50859   Sato M, Liebschner D, Yamada Y, Matsugaki N, Arakawa T, Wills SS, Hattie M, Stubbs KA, Ito T, Senda T, Ashida H, Fushinobu S.   The first crystal structure of a family 129 glycoside hydrolase from a probiotic bacterium reveals critical residues and metal cofactors.   J. Biol. Chem.   2017 -7 -21   292(29)   12126-12138   28546425   10.1074/jbc.M117.777391  
C.elegans   tm1863,tm3681   51393   Kogure A, Uno M, Ikeda T, Nishida E.   The microRNA machinery regulates fasting-induced changes in gene expression and longevity in Caenorhabditis elegans.   J. Biol. Chem.   2017 -7 -7   292(27)   11300-11309   28507100   10.1074/jbc.M116.765065  
C.elegans   tm4924,tm6379   51403   McReynolds MR, Wang W, Holleran LM, Hanna-Rose W.   Uridine monophosphate synthetase enables eukaryotic de novo NAD+ biosynthesis from quinolinic acid.   J. Biol. Chem.   2017 -7 -7   292(27)   11147-11153   28559281   10.1074/jbc.C117.795344  
DNA material   pcDEF3-Myc-mTLE3 (RDB15784); pGL4.26_0.8kb-Luc (RDB15785...   50342   Kokabu S, Nakatomi C, Matsubara T, Ono Y, Addison WN, Lowery JW, Urata M, Hudnall AM, Hitomi S, Nakatomi M, Sato T, Osawa K, Yoda T, Rosen V, Jimi E.   The transcriptional co-repressor TLE3 regulates myogenic differentiation by repressing the activity of the MyoD transcription factor.   J. Biol. Chem.   2017 -6 -14   292(31)   12885-12894   28607151   10.1074/jbc.M116.774570  
Human and Animal Cells   PANC-1(RCB2095)   52225   Kumazoe M, Takai M, Hiroi S, Takeuchi C, Kadomatsu M, Nojiri T, Onda H, Bae J, Huang Y, Takamatsu K, Yamashita S, Kangawa K, Tachibana H.   The FOXO3/PGC-1β signaling axis is essential for cancer stem cell properties of pancreatic ductal adenocarcinoma.   J. Biol. Chem.   2017 -6 -3   292(26)   10813-10823   28507102   10.1074/jbc.M116.772111  
Yeast   FY12806   48765   Plante S, Normant V, Ramos-Torres KM, Labbé S.   Cell-surface copper transporters and superoxide dismutase 1 are essential for outgrowth during fungal spore germination.   J. Biol. Chem.   2017 -6 -3   292(28)   11896-11914   28572514   10.1074/jbc.M117.794677  
General Microbes   JCM 2839   50817   Abe K, Nakajima M, Yamashita T, Matsunaga H, Kamisuki S, Nihira T, Takahashi Y, Sugimoto N, Miyanaga A, Nakai H, Arakawa T, Fushinobu S, Taguchi H.   Biochemical and structural analyses of a bacterial endo-β-1,2-glucanase reveal a new glycoside hydrolase family.   J. Biol. Chem.   2017 -05 -05   292(18)   7487-7506   28270506   10.1074/jbc.M116.762724  
Human and Animal Cells   C2C12 (RCB0987)   52130   Go S, Go S, Veillon L, Ciampa MG, Mauri L, Sato C, Kitajima K, Prinetti A, Sonnino S, Inokuchi JI.   Altered expression of ganglioside GM3 molecular species and a potential regulatory role during myoblast differentiation.   J. Biol. Chem.   2017 -4 -28   292(17)   7040-7051   28275055   10.1074/jbc.M116.771253  
DNA material   rHpcidin(-1861)-luc (RDB15720); mIL-6(-300_-79)-l...   50060   Kanamori Y, Murakami M, Sugiyama M, Hashimoto O, Matsui T, Funaba M.   Interleukin-1β (IL-1β) transcriptionally activates hepcidin by inducing CCAAT enhancer-binding protein δ (C/EBPδ) expression in hepatocytes.   J. Biol. Chem.   2017 -4 -26   292(24)   10275-10287   28438835   10.1074/jbc.M116.770974  
Drosophila   1762R-1   47791   Nonaka S, Ando Y, Kanetani T, Hoshi C, Nakai Y, Nainu F, Nagaosa K, Shiratsuchi A, Nakanishi Y.   Signaling pathway for phagocyte priming upon encounter with apoptotic cells.   J. Biol. Chem.   2017 -3 -23   292(19)   8059-8072   28325838   10.1074/jbc.M116.769745  
Drosophila   7356R-1,7356R-2   50490   Maki K, Shibata T, Kawabata SI.   Transglutaminase-catalyzed incorporation of polyamines masks the DNA-binding region of the transcription factor Relish.   J. Biol. Chem.   2017 -3 -5   292(15)   6369-6380   28258224   10.1074/jbc.M117.779579  
Human and Animal Cells   HL-60-R2(RCB1550)   52036   Sunami Y, Araki M, Kan S, Ito A, Hironaka Y, Imai M, Morishita S, Ohsaka A, Komatsu N.   Histone Acetyltransferase p300/CREB-binding Protein-associated Factor (PCAF) Is Required for All-trans-retinoic Acid-induced Granulocytic Differentiation in Leukemia Cells.   J. Biol. Chem.   2017 -2 -17   292(7)   2815-2829   28053092   10.1074/jbc.M116.745398  
General Microbes   JCM 16667   50678   Kim J, Park C, Imlay JA, Park W.   Lineage-specific SoxR-mediated Regulation of an Endoribonuclease Protects Non-enteric Bacteria from Redox-active Compounds.   J. Biol. Chem.   2017 -1 -6   292(1)   121-133   27895125   10.1074/jbc.M116.757500  
Human and Animal Cells   LC-2/ad(RCB0440)   51944   Terashima M, Tange S, Ishimura A, Suzuki T.   MEG3 Long Noncoding RNA Contributes to the Epigenetic Regulation of Epithelial-Mesenchymal Transition in Lung Cancer Cell Lines.   J. Biol. Chem.   2017 -1 -6   292(1)   82-99   27852821   10.1074/jbc.M116.750950  
DNA material   pCALNL5 (RDB01862)   48551   Hata S, Kitamura F, Yamaguchi M, Shitara H, Murakami M, Sorimachi H.   A Gastrointestinal Calpain Complex, G-calpain, Is a Heterodimer of CAPN8 and CAPN9 Calpain Isoforms, Which Play Catalytic and Regulatory Roles, Respectively.   J. Biol. Chem.   2016 -11 -25   291(53)   27313-27322   27881674   10.1074/jbc.M116.763912  
Human and Animal Cells   KP4(RCB1005)   51971   Sellmann C, Doerner A, Knuehl C, Rasche N, Sood V, Krah S, Rhiel L, Messemer A, Wesolowski J, Schuette M, Becker S, Toleikis L, Kolmar H, Hock B.   Balancing Selectivity and Efficacy of Bispecific Epidermal Growth Factor Receptor (EGFR) × c-MET Antibodies and Antibody-Drug Conjugates.   J. Biol. Chem.   2016 -11 -25   291(48)   25106-25119   27694443   10.1074/jbc.M116.753491  
DNA material   AxCANCre (RDB01748)   47460   Chanmee T, Ontong P, Izumikawa T, Higashide M, Mochizuki N, Chokchaitaweesuk C, Khansai M, Nakajima K, Kakizaki I, Kongtawelert P, Taniguchi N, Itano N.   Hyaluronan Production Regulates Metabolic and Cancer Stem-like Properties of Breast Cancer Cells via Hexosamine Biosynthetic Pathway-coupled HIF-1 Signaling.   J. Biol. Chem.   2016 -10 -21   291(46)   24105-24120   27758869   10.1074/jbc.M116.751263  
General Microbes   JCM 2777, JCM 1673   48439   Sekihara S, Shibata T, Hyakkendani M, Kawabata SI.   RNA Interference Directed against the Transglutaminase Gene Triggers Dysbiosis of Gut Microbiota in Drosophila.   J. Biol. Chem.   2016 -10 -21   291(48)   25077-25087   27760824   10.1074/jbc.M116.761791  
Drosophila   7356R-1,7356R-2   47231   Sekihara S, Shibata T, Hyakkendani M, Kawabata SI.   RNA Interference Directed against the Transglutaminase Gene Triggers Dysbiosis of Gut Microbiota in Drosophila.   J. Biol. Chem.   2016 -10 -21   291(48)   25077-25087   27760824   10.1074/jbc.M116.761791  
Drosophila   3925R-3   47233   Wakabayashi S, Sawamura N, Voelzmann A, Broemer M, Asahi T, Hoch M.   Ohgata, the Single Drosophila Ortholog of Human Cereblon, Regulates Insulin Signaling-dependent Organismic Growth.   J. Biol. Chem.   2016 -10 -21   291(48)   25120-25132   27702999   10.1074/jbc.M116.757823  
Drosophila   9553R-3   46765   Matsukawa K, Hashimoto T, Matsumoto T, Ihara R, Chihara T, Miura M, Wakabayashi T, Iwatsubo T.   Familial Amyotrophic Lateral Sclerosis-linked Mutations in Profilin 1 Exacerbate TDP-43-induced Degeneration in the Retina of Drosophila melanogaster through an Increase in the Cytoplasmic Localization of TDP-43.   J. Biol. Chem.   2016 -9 -17   291(45)   23464-23476   27634045   10.1074/jbc.M116.729152  
General Microbes   JCM 1217   48438   Ejby M, Fredslund F, Andersen JM, Vujičić Žagar A, Henriksen JR, Andersen TL, Svensson B, Slotboom DJ, Abou Hachem M.   An ATP Binding Cassette Transporter Mediates the Uptake of α-(1,6)-Linked Dietary Oligosaccharides in Bifidobacterium and Correlates with Competitive Growth on These Substrates.   J. Biol. Chem.   2016 -8 -10   291(38)   20220-31   27502277   10.1074/jbc.M116.746529  
Human and Animal Cells   CACO-2(RCB0988)   51695   Wakita M, Edamatsu H, Li M, Emi A, Kitazawa S, Kataoka T.   Phospholipase Cϵ Activates Nuclear Factor-κB Signaling by Causing Cytoplasmic Localization of Ribosomal S6 Kinase and Facilitating Its Phosphorylation of Inhibitor κB in Colon Epithelial Cells.   J. Biol. Chem.   2016 -6 -1   291(24)   12586-600   27053111   10.1074/jbc.M116.717561  
Tomato   TOMJPF00001   47762   Kunishima M, Yamauchi Y, Mizutani M, Kuse M, Takikawa H, Sugimoto Y.   Identification of (Z)-3:(E)-2-Hexenal Isomerases Essential to the Production of the Leaf Aldehyde in Plants.   J. Biol. Chem.   2016 -5 -1   291(27)   14023-33   27129773   10.1074/jbc.M116.726687  
Mice   B6.Cg-Tg(CAG-Cre)CZ-MO2Osb(RBRC01828)   36839   Naganuma T, Takagi S, Kanetake T, Kitamura T, Hattori S, Miyakawa T, Sassa T, Kihara A.   Disruption of the Sjögren-Larsson Syndrome Gene Aldh3a2 in Mice Increases Keratinocyte Growth and Retards Skin Barrier Recovery.   J. Biol. Chem.   2016 -4 -8   291(22)   11676-88   27053112   10.1074/jbc.M116.714030  
Tropical clawed frog   X. tropicalis   47749   Saito S, Ohkita M, Saito CT, Takahashi K, Tominaga M, Ohta T.   Evolution of Heat Sensors Drove Shifts in Thermosensation between Xenopus Species Adapted to Different Thermal Niches.   J. Biol. Chem.   2016 -3 -30   291(21)   11446-59   27022021   10.1074/jbc.M115.702498  
General Microbes   JCM 11548   48437   Taguchi Y, Fujinami D, Kohda D.   Comparative Analysis of Archaeal Lipid-linked Oligosaccharides That Serve as Oligosaccharide Donors for Asn Glycosylation.   J. Biol. Chem.   2016 -3 -27   291(21)   11042-54   27015803   10.1074/jbc.M115.713156  
Human and Animal Cells   RAW 264(RCB0535)   51631   Wada T, Sunaga H, Miyata K, Shirasaki H, Uchiyama Y, Shimba S.   Aryl Hydrocarbon Receptor Plays Protective Roles against High Fat Diet (HFD)-induced Hepatic Steatosis and the Subsequent Lipotoxicity via Direct Transcriptional Regulation of Socs3 Gene Expression.   J. Biol. Chem.   2016 -3 -25   291(13)   7004-16   26865635   10.1074/jbc.M115.693655  
DNA material   Genome Network Project Human cDNA Clone IRAK098M05 ...   47486   Katoh Y, Terada M, Nishijima Y, Takei R, Nozaki S, Hamada H, Nakayama K.   Overall Architecture of the Intraflagellar Transport (IFT)-B Complex Containing Cluap1/IFT38 as an Essential Component of the IFT-B Peripheral Subcomplex.   J. Biol. Chem.   2016 -3 -17   291(21)   10962-75   26980730   10.1074/jbc.M116.713883  
Yeast   TA1126, TA1125, TA1368   36026   Cohen A, Kupiec M, Weisman R.   Gad8 Protein Is Found in the Nucleus Where It Interacts with the MluI Cell Cycle Box-binding Factor (MBF) Transcriptional Complex to Regulate the Response to DNA Replication Stress.   J. Biol. Chem.   2016 -2 -26   291(17)   9371-81   26912660   10.1074/jbc.M115.705251  
DNA material   pCAG-HIVgp (RDB04394); CSII-CMV-MCS-IRES2-Bsd (RDB04385...   49650   Kobayashi S, Suzuki T, Kawaguchi A, Phongphaew W, Yoshii K, Iwano T, Harada A, Kariwa H, Orba Y, Sawa H.   Rab8b Regulates Transport of West Nile Virus Particles from Recycling Endosomes.   J. Biol. Chem.   2016 -1 -29   291(12)   6559-68   26817838   10.1074/jbc.M115.712760  
Silkworms     36158   Tsubota T, Tomita S, Uchino K, Kimoto M, Takiya S, Kajiwara H, Yamazaki T, Sezutsu H.   A Hox Gene, Antennapedia, Regulates Expression of Multiple Major Silk Protein Genes in the Silkworm Bombyx mori.   J. Biol. Chem.   2016 -1 -28   291(13)   7087-96   26814126   10.1074/jbc.M115.699819  
Arabidopsis / Cultured plant cells, genes   pst15793, pst16212   36743   Uhrig RG, Labandera AM, Muhammad J, Samuel M, Moorhead GB.   Rhizobiales-like Phosphatase 2 from Arabidopsis thaliana Is a Novel Phospho-tyrosine-specific Phospho-protein Phosphatase (PPP) Family Protein Phosphatase.   J. Biol. Chem.   2016 -1 -9   291(11)   5926-34   26742850   10.1074/jbc.M115.683656  
Mice   B6.Cg-Tg(FucciS/G2/M)#474Bsi(RBRC02704), B6.Cg-...   35754   Takegahara N, Kim H, Mizuno H, Sakaue-Sawano A, Miyawaki A, Tomura M, Kanagawa O, Ishii M, Choi Y.   Involvement of Receptor Activator of Nuclear Factor-κB Ligand (RANKL)-induced Incomplete Cytokinesis in the Polyploidization of Osteoclasts.   J. Biol. Chem.   2015 -12 -17   291(7)   3439-54   26670608   10.1074/jbc.M115.677427  
Human and Animal Cells     39151   Takegahara N, Kim H, Mizuno H, Sakaue-Sawano A, Miyawaki A, Tomura M, Kanagawa O, Ishii M, Choi Y.   Involvement of Receptor Activator of Nuclear Factor-κB Ligand (RANKL)-induced Incomplete Cytokinesis in the Polyploidization of Osteoclasts.   J. Biol. Chem.   2015 -12 -17   291(7)   3439-54   26670608   10.1074/jbc.M115.677427  
Mice   B6.129-Mapk14<tm1.2Otsu>(RBRC02192)   36006   Schnöder L, Hao W, Qin Y, Liu S, Tomic I, Liu X, Fassbender K, Liu Y.   Deficiency of Neuronal p38α MAPK Attenuates Amyloid Pathology in Alzheimer Disease Mouse and Cell Models through Facilitating Lysosomal Degradation of BACE1.   J. Biol. Chem.   2015 -12 -15   291(5)   2067-79   26663083   10.1074/jbc.M115.695916  
Human and Animal Cells   RBL 2H3(RCB2782)   38903   Nakakita S, Itoh A, Nakakita Y, Nonaka Y, Ogawa T, Nakamura T, Nishi N.   Cooperative Interactions of Oligosaccharide and Peptide Moieties of a Glycopeptide Derived from IgE with Galectin-9.   J. Biol. Chem.   2015 -11 -20   291(2)   968-79   26582205   10.1074/jbc.M115.694448  
Yeast   BYP6740   36222   Nishino K, Obara K, Kihara A.   The C-terminal Cytosolic Region of Rim21 Senses Alterations in Plasma Membrane Lipid Composition: INSIGHTS INTO SENSING MECHANISMS FOR PLASMA MEMBRANE LIPID ASYMMETRY.   J. Biol. Chem.   2015 -11 -4   290(52)   30797-805   26527678   10.1074/jbc.M115.674382  
Human and Animal Cells   BM-N(RCB0457)   37890   Kayukawa T, Nagamine K, Ito Y, Nishita Y, Ishikawa Y, Shinoda T.   Krüppel Homolog 1 Inhibits Insect Metamorphosis via Direct Transcriptional Repression of Broad-Complex, a Pupal Specifier Gene.   J. Biol. Chem.   2015 -11 -1   291(4)   1751-62   26518872   10.1074/jbc.M115.686121  
Human and Animal Cells   293T(RCB2202)   38377   Hang Q, Isaji T, Hou S, Im S, Fukuda T, Gu J.   Integrin α5 Suppresses the Phosphorylation of Epidermal Growth Factor Receptor and Its Cellular Signaling of Cell Proliferation via N-Glycosylation.   J. Biol. Chem.   2015 -10 -21   290(49)   29345-60   26483551   10.1074/jbc.M115.682229  
Human and Animal Cells   B16 melanoma 4A5(RCB0557)   37888   Inada M, Takita M, Yokoyama S, Watanabe K, Tominari T, Matsumoto C, Hirata M, Maru Y, Maruyama T, Sugimoto Y, Narumiya S, Uematsu S, Akira S, Murphy G, Nagase H, Miyaura C.   Direct Melanoma Cell Contact Induces Stromal Cell Autocrine Prostaglandin E2-EP4 Receptor Signaling That Drives Tumor Growth, Angiogenesis, and Metastasis.   J. Biol. Chem.   2015 -10 -18   290(50)   29781-93   26475855   10.1074/jbc.M115.669481  
C.elegans   tm2673, tm2905   45655   Wang W, McReynolds MR, Goncalves JF, Shu M, Dhondt I, Braeckman BP, Lange SE, Kho K, Detwiler AC, Pacella MJ, Hanna-Rose W.   Comparative Metabolomic Profiling Reveals That Dysregulated Glycolysis Stemming from Lack of Salvage NAD+ Biosynthesis Impairs Reproductive Development in Caenorhabditis elegans.   J. Biol. Chem.   2015 -9 -10   290(43)   26163-79   26350462   10.1074/jbc.M115.662916  
Silkworms     36144   Katsuma S, Sugano Y, Kiuchi T, Shimada T.   Two Conserved Cysteine Residues Are Required for the Masculinizing Activity of the Silkworm Masc Protein.   J. Biol. Chem.   2015 -9 -6   290(43)   26114-24   26342076   10.1074/jbc.M115.685362  
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