RRC ID 11480
著者 Huo YY, Xu XW, Li X, Liu C, Cui HL, Wang CS, Wu M.
タイトル Ruegeria marina sp. nov., isolated from marine sediment.
ジャーナル Int J Syst Evol Microbiol
Abstract A Gram-negative, neutrophilic and rod-shaped bacterium, strain ZH17(T), was isolated from a marine sediment of the East China Sea and subjected to a polyphasic taxonomic characterization. The isolate grew in the presence of 0-7.5 % (w/v) NaCl and at pH 6.5-9.0; optimum growth was observed with 0.5-3.0 % (w/v) NaCl and at pH 7.5. Chemotaxonomic analysis showed ubiquinone-10 as predominant respiratory quinone and C(18 : 1)ω7c, 11-methyl C(18 : 1)ω7c, C(16 : 0), C(12 : 0) 3-OH and C(16 : 0) 2-OH as major fatty acids. The genomic DNA G+C content was 63.5 mol%. Comparative 16S rRNA gene sequence analysis revealed that the isolate belongs to the genus Ruegeria. Strain ZH17(T) exhibited the closest phylogenetic affinity to the type strain of Ruegeria pomeroyi, with 97.2 % sequence similarity, and less than 97 % sequence similarity with respect to other described species of the genus Ruegeria. The DNA-DNA reassociation value between strain ZH17(T) and R. pomeroyi DSM 15171(T) was 50.7 %. On the basis of phenotypic and genotypic data, strain ZH17(T) represents a novel species of the genus Ruegeria, for which the name Ruegeria marina sp. nov. (type strain ZH17(T) =CGMCC 1.9108(T) =JCM 16262(T)) is proposed.
巻・号 61(Pt 2)
ページ 347-350
公開日 2011-2-1
DOI 10.1099/ijs.0.022400-0
PMID 20228209
MeSH Bacterial Typing Techniques Base Composition China DNA, Bacterial / genetics Fatty Acids / analysis Geologic Sediments / microbiology* Molecular Sequence Data Phenotype Phylogeny* RNA, Ribosomal, 16S / genetics Rhodobacteraceae / classification* Rhodobacteraceae / genetics Rhodobacteraceae / isolation & purification Sequence Analysis, DNA Ubiquinone / analysis Water Microbiology*
IF 2.415
引用数 20
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 16262