RRC ID 40802
著者 Lin SY, Hameed A, Hung MH, Liu YC, Hsu YH, Young LS, Young CC.
タイトル Pseudomonas matsuisoli sp. nov., isolated from a soil sample.
ジャーナル Int J Syst Evol Microbiol
Abstract An aerobic, Gram-stain-negative, rod-shaped and polar-flagellated bacterium, designated strain CC-MHH0089(T), was isolated from a soil sample taken on Matsu Island (Taiwan). Strain CC-MHH0089(T) grew at 15-30 °C and pH 5.0-10.0 and tolerated ≤8 % (w/v) NaCl. 16S rRNA gene sequence analysis showed high pairwise sequence similarity to Pseudomonas azotifigens 6H33b(T) (97.3 %) and Pseudomonas balearica SP1402(T) (96.7 %) and lower sequence similarity to other strains (<96.0 %). In DNA-DNA reassociation experiments, the relatedness of strain CC-MHH0089(T) to P. azotifigens JCM 12708(T) was 38.3 % (reciprocal value 19.5 %). Evolutionary trees reconstructed on the basis of 16S rRNA, gyrB and rpoB gene sequences revealed a varying phylogenetic neighbourhood of strain CC-MHH0089(T) with regard to the most closely related type strains. The predominant quinone system was ubiquinone 9 (Q-9) and the DNA G+C content was 63.6 mol%. The major fatty acids were C12 : 0, C16 : 0, C17 : 0, C19 : 0 cyclo ω8c and summed features 2 (C14 : 0 3-OH/iso-C16 : 1 I), 3 (C16 : 1ω7c/C16 : 1ω6c) and 8 (C18 : 1ω7c/C18 : 1ω6c). The major polar lipids were phosphatidylcholine, phosphatidylglycerol, phosphatidylethanolamine and diphosphatidylglycerol. According to its distinct phylogenetic, phenotypic and chemotaxonomic features, strain CC-MHH0089(T) is proposed to represent a novel species within the genus Pseudomonas, for which the name Pseudomonas matsuisoli sp. nov. is proposed. The type strain is CC-MHH0089(T) ( = BCRC 80771(T) = JCM 30078(T)).
巻・号 65(Pt 3)
ページ 902-909
公開日 2015-3-1
DOI 10.1099/ijs.0.000035
PMID 25525124
MeSH Bacterial Typing Techniques Base Composition DNA, Bacterial / genetics Fatty Acids / chemistry Genes, Bacterial Molecular Sequence Data Nucleic Acid Hybridization Phospholipids / chemistry Phylogeny* Pseudomonas / classification* Pseudomonas / genetics Pseudomonas / isolation & purification RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Soil Microbiology* Taiwan Ubiquinone / chemistry
IF 2.415
引用数 6
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 12708 JCM 30078