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Species Resource
Lotus / Glycine L. japonicus Tissue-specific transcriptome analysis in nodules of Lotus japonicus.
Paramecium P. bursaria , strains Yad1w and Yad1g1N Analysis of amino acid and codon usage in Paramecium bursaria.
Drosophila The Spalt Transcription Factors Generate the Transcriptional Landscape of the Drosophila melanogaster Wing Pouch Central Region.
Algae NIES-843 Nutrients drive transcriptional changes that maintain metabolic homeostasis but alter genome architecture in Microcystis.
Yeast NA Characterization and gene expression profiles of thermotolerant Saccharomyces cerevisiae isolates from Thai fruits.
Prokaryotes E. coli K-12 , W3110 Modulation of primary cell function of host Pseudomonas bacteria by the conjugative plasmid pCAR1.
Lotus / Glycine Gifu B-129 RNA-seq Transcriptional Profiling of an Arbuscular Mycorrhiza Provides Insights into Regulated and Coordinated Gene Expression in Lotus japonicus and Rhizophagus irregularis.
Lotus / Glycine Miyakojima MG-20 Polyphosphate accumulation is driven by transcriptome alterations that lead to near-synchronous and near-equivalent uptake of inorganic cations in an arbuscular mycorrhizal fungus.
Zebrafish Tg(HuC:Kaede)/rw0130a Quantitative proteomics reveals diverse roles of miR-148a from gastric cancer progression to neurological development.
Human and Animal Cells Establishment of new intraperitoneal paclitaxel-resistant gastric cancer cell lines and comprehensive gene expression analysis.
General Microbes JCM7017 , JCM7019 Transcriptional and functional characterization of genetic elements involved in galacto-oligosaccharide utilization by Bifidobacterium breve UCC2003.
Pathogenic microorganisms Comparative transcriptome analysis revealing dormant conidia and germination associated genes in Aspergillus species: an essential role for AtfA in conidial dormancy.
C.elegans Glucose or Altered Ceramide Biosynthesis Mediate Oxygen Deprivation Sensitivity Through Novel Pathways Revealed by Transcriptome Analysis in Caenorhabditis elegans.
Prokaryotes E. coli Transcriptome Analysis of Escherichia coli during dGTP Starvation.
Tomato TOMJPF00001 Genome-wide identification of pistil-specific genes expressed during fruit set initiation in tomato (Solanum lycopersicum).
Silkworms o751 Identification of functional enolase genes of the silkworm Bombyx mori from public databases with a combination of dry and wet bench processes.
Human and Animal Cells NB1RGB(RCB0222) Transcriptome analysis of periodontitis-associated fibroblasts by CAGE sequencing identified DLX5 and RUNX2 long variant as novel regulators involved in periodontitis.
Human and Animal Cells 454E2(HPS0077) Knock-in strategy at 3'-end of Crx gene by CRISPR/Cas9 system shows the gene expression profiles during human photoreceptor differentiation.
Human and Animal Cells HeLa/Fucci(HeLa.S-Fucci)(RCB2812) Comparative cell cycle transcriptomics reveals synchronization of developmental transcription factor networks in cancer cells.
C.elegans tm668 The dsRBP and inactive editor ADR-1 utilizes dsRNA binding to regulate A-to-I RNA editing across the C. elegans transcriptome.