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Species Resource Title
Human and Animal Cells CT27(RCB4936) , CT29(RCB4937) Transcriptome comparisons of trophoblasts from regenerative cell models with peri-implantation human embryos†.
Human and Animal Cells 606A1(HPS0328) LINE-1 retrotransposons drive human neuronal transcriptome complexity and functional diversification.
Human and Animal Cells 201B7-Ff(HPS4290) , 253G1(HPS0002) Pigmentation level of human iPSC-derived RPE does not indicate a specific gene expression profile.
Human and Animal Cells 201B7(HPS0063) Single-cell transcriptomics reveals the molecular basis of human iPS cell differentiation into ectodermal ocular lineages.
Lotus / Glycine Gifu B-129 Mapping the molecular landscape of Lotus japonicus nodule organogenesis through spatiotemporal transcriptomics
General Microbes JCM 17571 Erythritol alters gene transcriptome signatures, cell growth, and biofilm formation in Staphylococcus pseudintermedius.
Human and Animal Cells PC-3(RCB2145) , NIH:OVCAR-3(RCB2135) , K562(RCB0027) , HeLa(RCB0007) , CHO-K1(RCB0285) , GEM-81(RCB1174) High-throughput mechanical phenotyping and transcriptomics of single cells.
Human and Animal Cells K562(RCB0027) , NALM-6(RCB1933) Multiplexed transcriptomic profiling of the fate of human CAR T cells in vivo via genetic barcoding with shielded small nucleotides.
Mice RBRC00757 , RBRC06804 Mapping brain gene coexpression in daytime transcriptomes unveils diurnal molecular networks and deciphers perturbation gene signatures.
C.elegans tm6722 , tm6526 Effector and regulator: Diverse functions of C. elegans C-type lectin-like domain proteins.
Human and Animal Cells B6G-2(AES0003) , iPS-MEF-Ng-20D-17(APS0001) C1 CAGE detects transcription start sites and enhancer activity at single-cell resolution.
General Microbes JCM32406 Transcriptome and growth efficiency comparisons of recombinant thermophiles that produce thermolabile and thermostable proteins: implications for burden-based selection of thermostable proteins.
Human and Animal Cells K562(RCB0027) Comprehensive transcriptome analysis of erythroid differentiation potential of olive leaf in haematopoietic stem cells.
C.intestinalis / (O.japonicus) pMiDestF-CiVP 5’- UTR-Venus , pSP-CiVP 5’-UTR-Venus , VPTAL2 , VPTAL3 , pMiDestF , pBSCiEpiI>mcherry-CiEF1a>TALEN-NG , pTnI>TALEN-NG::2A::mCherry , pEF1>VP TALEN L1 , pEF1>VP TALEN R1 , pTnI>VP TALEN L1 , ... Vasopressin Promoter Transgenic and Vasopressin Gene-Edited Ascidian, Ciona intestinalis Type A (Ciona robusta): Innervation, Gene Expression Profiles, and Phenotypes.
C.intestinalis / (O.japonicus) pSP-Kaede Comprehensive single-cell transcriptome lineages of a proto-vertebrate.
C.intestinalis / (O.japonicus) Wild C. int Comparative analysis of transcriptomic profiles among ascidians, zebrafish, and mice: Insights from tissue-specific gene expression.
Human and Animal Cells B6G-2(AES0003) , FVB-1(AES0045) , iPS-MEF-Ng-20D-17(APS0001) Deep transcriptome profiling of mammalian stem cells supports a regulatory role for retrotransposons in pluripotency maintenance.
Human and Animal Cells Hep G2(RCB1886) Evaluation of whole wastewater effluent impacts on HepG2 using DNA microarray-based transcriptome analysis.
Tomato Moneymaker (accession No. TOMJPF00002) Transcriptome analysis of Clavibacter michiganensis subsp. michiganensis-infected tomatoes: a role of salicylic acid in the host response.
Algae NIES-4227 Depth-dependent transcriptomic response of diatoms during spring bloom in the western subarctic Pacific Ocean.