Reference - Detail
| RRC ID | 11493 |
|---|---|
| Author | Lee M, Woo SG, Chae M, Shin MC, Jung HM, Ten LN. |
| Title | Stenotrophomonas daejeonensis sp. nov., isolated from sewage. |
| Journal | Int J Syst Evol Microbiol |
| Abstract |
A Gram-stain-negative, motile, aerobic bacterial strain, designated MJ03(T), was isolated from sewage and was characterized taxonomically by using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that strain MJ03(T) belongs to the family Xanthomonadaceae, class Gammaproteobacteria, and was related most closely to Stenotrophomonas acidaminiphila AMX 19(T) (97.9 % sequence similarity), Stenotrophomonas humi R-32729(T) (97.1 %), Stenotrophomonas nitritireducens L2(T) (96.9 %), Stenotrophomonas maltophila ATCC 13637(T) (96.8 %) and Stenotrophomonas terrae R-32768(T) (96.7 %). The G+C content of the genomic DNA of strain MJ03(T) was 64.7 mol%. The detection of a quinone system with ubiquinone Q-8 as the predominant component and a fatty acid profile with iso-C₁₅:₀, iso-C₁₁:₀, iso-C₁₄:₀, iso-C₁₇:₁ω9c, iso-C₁₁:₀ 3-OH and iso-C₁₃:₀ 3-OH as major components supported the affiliation of strain MJ03(T) to the genus Stenotrophomonas. However, levels of DNA-DNA relatedness between strain MJ03(T) and the type strains of five closely related species of the genus Stenotrophomonas ranged from 11 to 34 %, showing clearly that the isolate represents a novel genospecies. Strain MJ03(T) could be differentiated clearly from its phylogenetic neighbours on the basis of several phenotypic, genotypic and chemotaxonomic features. Therefore, strain MJ03(T) is considered to represent a novel species of the genus Stenotrophomonas, for which the name Stenotrophomonas daejeonensis sp. nov. is proposed. The type strain is MJ03(T) (=KCTC 22451(T) =JCM 16244(T)). |
| Volume | 61(Pt 3) |
| Pages | 598-604 |
| Published | 2011-3-1 |
| DOI | 10.1099/ijs.0.017780-0 |
| PMID | 20400671 |
| MeSH | Base Composition Cluster Analysis DNA, Bacterial / chemistry DNA, Bacterial / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics Fatty Acids / analysis Molecular Sequence Data Nucleic Acid Hybridization Phylogeny Quinones / analysis RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Sewage / microbiology* Stenotrophomonas / classification* Stenotrophomonas / genetics Stenotrophomonas / isolation & purification* Stenotrophomonas / physiology |
| IF | 2.415 |
| Times Cited | 20 |
| WOS Category | MICROBIOLOGY |
| Altmetric score |
オルトメトリクス指標項目
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| The most frequently cited source | Wikipedia |
| Total number of mentions | 1 |
| Altmetric score changes over past 6months | 0.0 |
| Resource | |
| General Microbes | JCM 16244 |