論文 - 詳細
| RRC ID | 15907 |
|---|---|
| 著者 | Shimizu S, Upadhye R, Ishijima Y, Naganuma T. |
| タイトル | Methanosarcina horonobensis sp. nov., a methanogenic archaeon isolated from a deep subsurface Miocene formation. |
| ジャーナル | Int J Syst Evol Microbiol |
| Abstract |
A methanogenic organism, designated strain HB-1(T), from the domain Archaea was isolated from groundwater sampled from a subsurface Miocene formation located in Horonobe, Hokkaido, Japan. The strain grew on methanol, dimethylamine, trimethylamine, dimethylsulfide and acetate but not on monomethylamine, H(2)/CO(2), formate, 2-propanol, 2-butanol or cyclopentanol. Cells were Gram-reaction-negative, non-motile, irregular cocci that were 1.4-2.9 µm in diameter and occurred singly or in pairs. The strain grew at 20-42 °C (optimum 37 °C), at pH 6.0-7.75 (optimum pH 7.0-7.25) and in 0-0.35 M NaCl (optimum 0.1 M). The G+C content of the genomic DNA was 41.4 mol%. 16S rRNA gene sequencing revealed that the strain was a member of the genus Methanosarcina but that it clearly differed from all recognized species of this genus (93.1-97.9 % sequence similarity). The phenotypic and phylogenetic features of strain HB-1(T) indicate that it represents a novel species of the genus Methanosarcina, for which the name Methanosarcina horonobensis sp. nov. is proposed. The type strain is HB-1(T) ( = DSM 21571(T) = JCM 15518(T) = NBRC 102577(T)). |
| 巻・号 | 61(Pt 10) |
| ページ | 2503-2507 |
| 公開日 | 2011-10-1 |
| DOI | 10.1099/ijs.0.028548-0 |
| PMID | 21112985 |
| MeSH | Base Composition Carbon / metabolism Cluster Analysis DNA, Archaeal / chemistry DNA, Archaeal / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics Genes, rRNA Groundwater / microbiology* Hydrogen-Ion Concentration Japan Methanosarcina / classification* Methanosarcina / genetics Methanosarcina / isolation & purification* Methanosarcina / physiology Molecular Sequence Data Phylogeny RNA, Archaeal / genetics RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Sequence Homology, Nucleic Acid Temperature |
| IF | 2.415 |
| 引用数 | 35 |
| WOS 分野 | MICROBIOLOGY |
| オルトメトリクス指標 |
オルトメトリクス指標項目
|
| 最多言及媒体 | Wikipedia |
| 各媒体での言及数の合計 | 3 |
| 過去6か月間でのオルトメトリクス指標の変動値 | 0.0 |
| リソース情報 | |
| 一般微生物 | JCM 15518 |