RRC ID 15921
著者 Liu M, Li YH, Liu Y, Zhu JN, Liu QF, Liu Y, Gu JG, Zhang XX, Li CL.
タイトル Flavobacterium phragmitis sp. nov., an endophyte of reed (Phragmites australis).
ジャーナル Int J Syst Evol Microbiol
Abstract A Gram-staining-negative bacterium, designated strain BLN2(T), was isolated from within the roots of reeds (Phragmites australis) in Beijing Cuihu Wetland (China) and characterized using a polyphasic taxonomic approach. The cells were yellow-pigmented, rod-shaped, strictly aerobic and devoid of flagella, but showed gliding motility. Strain BLN2(T) produced yellow, translucent, circular and convex colonies, with optimal growth at 30 °C and pH 7.0. The major respiratory quinone was menaquinone 6 (MK-6) and the predominant fatty acids were iso-C(15 : 0), summed feature 3 (comprising C(16 : 1)ω7c and/or C(16 : 1)ω6c), C(16 : 0) 3-OH, C(16 : 0,) iso-C(17 : 0) 3-OH and iso-C(15 : 0) 3-OH. The G+C content of the genomic DNA was 34.8 mol%. The 16S rRNA gene sequence analysis showed that strain BLN2(T) belonged to the genus Flavobacterium and was most closely related to Flavobacterium anhuiense CGMCC 1.6859(T) (97.0 % sequence similarity). The DNA-DNA relatedness between strain BLN2(T) and F. anhuiense CGMCC 1.6859(T) was 25.7 %. Based on the phenotypic data and phylogenetic inference presented, it is concluded that strain BLN2(T) represents a novel species within the genus Flavobacterium, for which the name Flavobacterium phragmitis sp. nov. is proposed. The type strain is BLN2(T) ( = DSM 23314(T) = CGMCC 1.10370(T)).
巻・号 61(Pt 11)
ページ 2717-2721
公開日 2011-11-1
DOI 10.1099/ijs.0.027417-0
PMID 21186290
MeSH Base Composition China DNA, Bacterial / genetics Endophytes / classification* Endophytes / genetics Endophytes / isolation & purification* Endophytes / metabolism Fatty Acids / metabolism Flavobacterium / classification* Flavobacterium / genetics Flavobacterium / isolation & purification* Flavobacterium / metabolism Molecular Sequence Data Phylogeny Plant Roots / microbiology Poaceae / microbiology* RNA, Ribosomal, 16S / genetics
IF 2.415
引用数 13
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 8514