RRC ID 19011
著者 Jung YT, Oh KH, Oh TK, Yoon JH.
タイトル Pseudorhodobacter aquimaris sp. nov., isolated from seawater, and emended description of the genus Pseudorhodobacter Uchino et al. 2002.
ジャーナル Int J Syst Evol Microbiol
Abstract A Gram-stain-negative, aerobic, motile, ovoid bacterial strain, designated HDW-19(T), was isolated from seawater of the west coast of Korea and subjected to a polyphasic taxonomic study. Strain HDW-19(T) grew optimally at pH 7.0-8.0, at 30 °C and in the presence of 2-3% (w/v) NaCl. Bacteriochlorophyll a was not produced by strain HDW-19(T). Neighbour-joining, maximum-likelihood and maximum-parsimony phylogenetic trees based on 16S rRNA gene sequences showed that strain HDW-19(T) clustered with Pseudorhodobacter ferrugineus IAM 12616(T), with which it shared 96.4% similarity. A neighbour-joining phylogenetic tree based on gyrB gene sequences showed that strain HDW-19(T) also clustered with the type strain of P. ferrugineus, sharing 83.0% similarity. Strain HDW-19(T) contained Q-10 as the predominant ubiquinone and C(18:1)ω7c as the major fatty acid. The major polar lipids were phosphatidylcholine, phosphatidylglycerol, three unidentified aminophospholipids and two unidentified aminolipids. The DNA G+C content of strain HDW-19(T) was 60.9 mol%. Differential phenotypic properties, together with phylogenetic distinctiveness, showed that strain HDW-19(T) can be differentiated from P. ferrugineus. On this basis, strain HDW-19(T) is considered to represent a novel species of the genus Pseudorhodobacter, for which the name Pseudorhodobacter aquimaris sp. nov. is proposed. The type strain is HDW-19(T) (=KCTC 23043(T) =CCUG 58879(T)).
巻・号 62(Pt 1)
ページ 100-105
公開日 2012-1-1
DOI 10.1099/ijs.0.029769-0
PMID 21335494
MeSH Aerobiosis Bacterial Typing Techniques Bacteriochlorophyll A / analysis Base Composition Cluster Analysis DNA Gyrase / genetics DNA, Bacterial / chemistry DNA, Bacterial / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics Fatty Acids / analysis Hydrogen-Ion Concentration Locomotion Molecular Sequence Data Phospholipids / analysis Phylogeny Quinones / analysis RNA, Ribosomal, 16S / genetics Republic of Korea Rhodobacteraceae / classification* Rhodobacteraceae / genetics Rhodobacteraceae / isolation & purification* Rhodobacteraceae / physiology Seawater / microbiology* Sequence Analysis, DNA Sodium Chloride / metabolism Temperature
IF 2.415
引用数 13
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 20687