論文 - 詳細
| RRC ID | 19068 |
|---|---|
| 著者 | Shin NR, Whon TW, Kim MS, Roh SW, Jung MJ, Kim YO, Bae JW. |
| タイトル | Ornithinibacillus scapharcae sp. nov., isolated from a dead ark clam. |
| ジャーナル | Antonie Van Leeuwenhoek |
| Abstract |
A novel Gram-positive, aerobic, motile, hemolytic, endospore-forming and rod-shaped bacterium TW25(T) was isolated from a dead ark clam during a mass mortality event on the South coast of Korea. The strain grew optimally at 30°C, at pH 8-9, and with 1% (w/v) NaCl. The 16S rRNA gene sequence analysis indicated that strain TW25(T) was associated with the genus Ornithinibacillus and that it was most closely related to the type strain of Ornithinibacillus californiensis (98.5% similarity). The dominant cellular fatty acids were iso-C15:0, anteiso-C15:0 and C16:0. The peptidoglycan amino acid type was A4β, containing L: -ornithine and D: -aspartic acid. The polar lipids were diphosphatidylglycerol, phosphatidylglycerol, four unidentified phospholipids, two unidentified aminolipids and two unidentified lipids. The major respiratory quinone was menaquinone-7 (MK-7). The G + C content of genomic DNA was 36.7 mol%. DNA-DNA hybridization experiments with related strains revealed lower than 11 ± 3% relatedness. Based on this polyphasic taxonomic study, strain TW25(T) represents a novel species in the genus Ornithinibacillus, for which the name Ornithinibacillus scapharcae sp. nov. is proposed. The type strain is TW25(T) (=KACC 15116(T) = JCM 17314(T)). |
| 巻・号 | 101(1) |
| ページ | 147-54 |
| 公開日 | 2012-1-1 |
| DOI | 10.1007/s10482-011-9645-3 |
| PMID | 21952732 |
| MeSH | Aerobiosis Amino Acids / analysis Animals Bacillaceae / classification* Bacillaceae / genetics Bacillaceae / isolation & purification* Bacillaceae / physiology Base Composition Bivalvia / microbiology* Cluster Analysis DNA, Bacterial / chemistry DNA, Bacterial / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics Fatty Acids / analysis Hemolysin Proteins / metabolism Hydrogen-Ion Concentration Locomotion Molecular Sequence Data Nucleic Acid Hybridization Peptidoglycan / chemistry Phospholipids / analysis Phylogeny Quinones / analysis RNA, Ribosomal, 16S / genetics Republic of Korea Sequence Analysis, DNA Sodium Chloride / metabolism Spores, Bacterial / cytology Temperature |
| IF | 2.674 |
| 引用数 | 11 |
| WOS 分野 | MICROBIOLOGY |
| オルトメトリクス指標 |
オルトメトリクス指標項目
|
| 最多言及媒体 | Wikipedia |
| 各媒体での言及数の合計 | 2 |
| 過去6か月間でのオルトメトリクス指標の変動値 | 0.0 |
| リソース情報 | |
| 一般微生物 | JCM 17314 |