RRC ID 21312
Author Borrel G, Joblin K, Guedon A, Colombet J, Tardy V, Lehours AC, Fonty G.
Title Methanobacterium lacus sp. nov., isolated from the profundal sediment of a freshwater meromictic lake.
Journal Int J Syst Evol Microbiol
Abstract An autotrophic, hydrogenotrophic methanogen, designated strain 17A1(T), was isolated from the profundal sediment of the meromictic Lake Pavin, France. The cells of the novel strain, which were non-motile, Gram-staining-negative rods that measured 2-15 µm in length and 0.2-0.4 µm in width, grew as filaments. Strain 17A1(T) grew in a mineral medium and its growth was stimulated by the addition of yeast extract, vitamins, acetate or rumen fluid. Penicillin, vancomycin and kanamycin reduced growth but did not completely inhibit it. Growth occurred at 14-41 °C (optimum 30 °C), at pH 5.0-8.5 (optimum pH 6.5) and with 0-0.4 M NaCl (optimum 0.1 M). The novel strain utilized H(2)/CO(2) and methanol/H(2) as substrates but not formate, acetate, methylamine/H(2), isobutanol or 2-propanol. Its genomic DNA G+C content was 37.0 mol%. In phylogenetic analyses based on 16S rRNA gene sequences, strain 17A1(T) appeared to be a member of the genus Methanobacterium, with Methanobacterium beijingense 8-2(T) (96.3% sequence similarity) identified as the most closely related established species. Based on phenotypic and phylogenetic data, strain 17A1(T) represents a novel species of methanogen within the genus Methanobacterium, for which the name Methanobacterium lacus sp. nov. is proposed. The type strain is 17A1(T) (=DSM 24406(T)=JCM 17760(T)).
Volume 62(Pt 7)
Pages 1625-1629
Published 2012-7-1
DOI 10.1099/ijs.0.034538-0
PMID 21890730
MeSH Anti-Bacterial Agents / pharmacology Bacterial Typing Techniques Base Composition Cluster Analysis Culture Media / chemistry DNA, Bacterial / chemistry DNA, Bacterial / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics France Fresh Water Geologic Sediments / microbiology* Hydrogen-Ion Concentration Methanobacterium / classification* Methanobacterium / genetics Methanobacterium / growth & development Methanobacterium / isolation & purification* Molecular Sequence Data Phylogeny RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Sodium Chloride / metabolism Temperature
IF 2.415
Times Cited 19
WOS Category MICROBIOLOGY
Resource
General Microbes JCM 17760