RRC ID 27471
著者 Liu ZX, Yang LL, Huang Y, Zhao H, Liu H, Tang SK, Li WJ, Chen YG.
タイトル Rothia marina sp. nov., isolated from an intertidal sediment of the South China Sea.
ジャーナル Antonie Van Leeuwenhoek
Abstract A novel non-sporulating, non-motile, catalase-positive, oxidase-negative, facultatively anaerobic, Gram-positive coccus, designated strain JSM 078151(T), was isolated from an intertidal sediment sample collected from Naozhou Island in the South China Sea, China. Growth was found to occur in the presence of 0-15 % (w/v) NaCl (optimum 0.5-3 % (w/v) NaCl), at pH 6.5-10.5 (optimum pH 7.0-8.0) and at 5-35 °C (optimum 25-30 °C). The peptidoglycan type was determined to be A3a, containing lysine, glutamic acid and alanine. The major cellular fatty acid identified was anteiso-C15:0 and the predominant menaquinones are MK-7 and MK-8. The polar lipids were found to consist of diphosphatidylglycerol, phosphatidylglycerol, glycolipid and one unidentified phospholipid. The genomic DNA G+C content of strain JSM 078151(T) was determined to be 55.2 mol%. A phylogenetic analysis based on 16S rRNA gene sequence comparisons revealed that strain JSM 078151(T) should be assigned to the genus Rothia, and was most closely related to Rothia nasimurium CCUG 35957(T) (98.3 % sequence similarity), followed by Rothia amarae J18(T) (97.5 %) and Rothia terrae L-143(T) (97.3 %). A combination of phylogenetic analysis, DNA-DNA relatedness values, phenotypic characteristics and chemotaxonomic data supports the suggestion that strain JSM 078151(T) represents a novel species of the genus Rothia, for which the name Rothia marina sp. nov. is proposed. The type strain is JSM 078151(T) (= DSM 21080(T) = KCTC 19432(T)).
巻・号 104(3)
ページ 331-7
公開日 2013-9-1
DOI 10.1007/s10482-013-9955-8
PMID 23793563
MeSH Amino Acids / analysis Bacterial Typing Techniques Base Composition China Cluster Analysis Cytosol / chemistry DNA, Bacterial / chemistry DNA, Bacterial / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics Fatty Acids / analysis Geologic Sediments* Gram-Positive Cocci / chemistry Gram-Positive Cocci / classification* Gram-Positive Cocci / genetics Gram-Positive Cocci / isolation & purification* Hydrogen-Ion Concentration Micrococcaceae / chemistry Micrococcaceae / classification* Micrococcaceae / genetics Micrococcaceae / isolation & purification* Molecular Sequence Data Nucleic Acid Hybridization Oceans and Seas Peptidoglycan / chemistry Phospholipids / analysis Phylogeny Quinones / analysis RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Sodium Chloride Temperature
IF 2.674
引用数 2
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 15158