| RRC ID |
29409
|
| 著者 |
Kim JJ, Kim JH, Kwon YK, Kwon KK, Yang SH, Jang J, Heo SJ, Park HS, Jung WK, Lee Y, Kang DH, Oh C.
|
| タイトル |
Algivirga pacifica gen. nov., sp. nov., a novel agar-degrading marine bacterium of the family Flammeovirgaceae isolated from Micronesia.
|
| ジャーナル |
Curr Microbiol
|
| Abstract |
An aerobic, Gram-negative, coccoid to short rod-shaped and non-flagellated marine bacterial strain S354(T) was isolated from seawater of Micronesia. The strain was capable to degrade agar-forming slight depression into agar plate. Growth occurred at a temperature range of 12-44 °C, a pH range of 5-9, and a salinity range of 1-7 % (w/v) NaCl. Phylogenetic analyses based on 16S rRNA gene sequences suggested that S354(T) belongs to the family Flammeovirgaceae. The novel strain was most closely related to Limibacter armeniacum YM 11-185(T) with similarity of 92.5 %. The DNA G+C content was 43.8 mol%. The major fatty acids (>10 %) were iso-C15:0 and C16:1 ω5c. The predominant isoprenoid quinone was determined to be MK-7. Polar lipid profile of S354(T) consisted of phosphatidylethanolamine, unknown polar lipid, and unknown glycolipids. Based on the phenotypic, phylogenetic, biochemical, and physiological tests conducted in this study, S354(T) is proposed to represent a type strain of a novel genus and species. The 16S rRNA gene sequence of S354(T) is registered in GenBank under the accession number JQ639084. The type of strain Algivirga pacifica gen. nov., sp. nov. is S354(T) (=KCCM 90107(T)=JCM 18326(T)).
|
| 巻・号 |
67(6)
|
| ページ |
742-7
|
| 公開日 |
2013-12-1
|
| DOI |
10.1007/s00284-013-0429-z
|
| PMID |
23907492
|
| MeSH |
Agar / metabolism*
Bacterial Typing Techniques
Bacteroidetes / classification*
Bacteroidetes / genetics
Bacteroidetes / isolation & purification*
Bacteroidetes / metabolism
Base Composition
Cluster Analysis
DNA, Bacterial / chemistry
DNA, Bacterial / genetics
DNA, Ribosomal / chemistry
DNA, Ribosomal / genetics
Fatty Acids / analysis
Hydrogen-Ion Concentration
Micronesia
Microscopy, Electron, Scanning
Molecular Sequence Data
Phospholipids / analysis
Phylogeny
Quinones / analysis
RNA, Ribosomal, 16S / genetics
Seawater / microbiology*
Sequence Analysis, DNA
Sodium Chloride / metabolism
Temperature
|
| IF |
1.746
|
| 引用数 |
2
|
|
WOS 分野
|
MICROBIOLOGY
|
| リソース情報 |
| 一般微生物 |
JCM 18326 |
