Reference - Detail
| RRC ID | 34260 |
|---|---|
| Author | Okazaki K, Iino T, Kuroda Y, Taguchi K, Takahashi H, Ohwada T, Tsurumaru H, Okubo T, Minamisawa K, Ikeda S. |
| Title | An assessment of the diversity of culturable bacteria from main root of sugar beet. |
| Journal | Microbes Environ |
| Abstract |
The partial sequences of the 16S rRNA genes of 531 bacteria isolated from the main root of the sugar beet (Beta vulgaris L.) were determined and subsequently grouped into 155 operational taxonomic units by clustering analysis (≥99% identity). The most abundant phylum was Proteobacteria (72.5-77.2%), followed by Actinobacteria (9.8-16.6%) and Bacteroidetes (4.3-15.4%). Alphaproteobacteria (46.7-64.8%) was the most dominant class within Proteobacteria. Four strains belonging to Verrucomicrobia were also isolated. Phylogenetic analysis revealed that the Verrucomicrobia bacterial strains were closely related to Haloferula or Verrucomicrobium. |
| Volume | 29(2) |
| Pages | 220-3 |
| Published | 2014-1-1 |
| DOI | 10.1264/jsme2.me13182 |
| PII | DN/JST.JSTAGE/jsme2/ME13182 |
| PMID | 24789987 |
| PMC | PMC4103529 |
| MeSH | Actinobacteria / classification* Actinobacteria / genetics Actinobacteria / isolation & purification Alphaproteobacteria / classification Alphaproteobacteria / genetics Alphaproteobacteria / isolation & purification Bacteroidetes / classification* Bacteroidetes / genetics Bacteroidetes / isolation & purification Beta vulgaris / microbiology* Biodiversity Cluster Analysis DNA, Bacterial / chemistry DNA, Bacterial / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics Molecular Sequence Data Phylogeny Plant Roots / microbiology Proteobacteria / classification* Proteobacteria / genetics Proteobacteria / isolation & purification RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA |
| IF | 2.575 |
| Times Cited | 9 |
| WOS Category | BIOTECHNOLOGY & APPLIED MICROBIOLOGY MICROBIOLOGY |
| Resource | |
| General Microbes | JCM 18780 JCM 18781 JCM 18782 |