| RRC ID |
35320
|
| 著者 |
Pradipta AR, Fujimoto Y, Hasegawa M, Inohara N, Fukase K.
|
| タイトル |
Characterization of natural human nucleotide-binding oligomerization domain protein 1 (Nod1) ligands from bacterial culture supernatant for elucidation of immune modulators in the environment.
|
| ジャーナル |
J Biol Chem
|
| Abstract |
Nucleotide-binding oligomerization domain protein 1 (Nod1) is an intracellular protein involved in recognition of the bacterial component peptidoglycan. This recognition event induces a host defense response to eliminate invading pathogens. The genetic variation of Nod1 has been linked to several inflammatory diseases and allergies, which are strongly affected by environmental factors. We have found that many of the bacteria that contain DAP-type peptidoglycan release Nod1 ligands into the environment. However, the structures of natural Nod1 ligands in the environment are not well understood. Herein, we report the isolation and structural elucidation of natural human Nod1 (hNod1) ligands from the Escherichia coli K-12 culture supernatant. The supernatant was fractionated with reversed-phase high performance liquid chromatography (RP-HPLC), resulting in the isolation of several hNod1 stimulatory fractions. Structural characterization studies demonstrated that the molecular structure of the most active fraction was the native hNod1 ligand GlcNAc-(beta1-4)-(anhydro)MurNAc-l-Ala-gamma-d-Glu-meso-DAP. We also found other peptidoglycan fragments using the 7-(diethylamino)coumarin-3-carbonyl labeling method to enhance sensitivity in mass spectroscopy studies. These results suggested that DAP-containing bacteria release certain hNod1 ligands to the environment, and these ligands would accumulate in the environment and regulate the immune system through Nod1.
|
| 巻・号 |
285(31)
|
| ページ |
23607-13
|
| 公開日 |
2010-7-30
|
| DOI |
10.1074/jbc.M110.137893
|
| PII |
S0021-9258(20)61825-7
|
| PMID |
20519512
|
| PMC |
PMC2911303
|
| MeSH |
Biological Assay / methods
Chromatography, High Pressure Liquid / methods
Escherichia coli / metabolism*
Humans
Immune System
Inflammation
Ligands
Magnetic Resonance Spectroscopy
Mass Spectrometry / methods
Nod1 Signaling Adaptor Protein / metabolism*
Nucleotides / chemistry*
Peptides / chemistry
Peptidoglycan / chemistry
Protein Binding
Protein Structure, Tertiary
|
| IF |
4.238
|
| 引用数 |
12
|
|
WOS 分野
|
BIOCHEMISTRY & MOLECULAR BIOLOGY
|
| リソース情報 |
| 原核生物(大腸菌) |
K-12 strains? |
