RRC ID 40883
著者 Singh P, Kim YJ, Nguyen NL, Hoang VA, Sukweenadhi J, Farh Mel-A, Yang DC.
タイトル Cupriavidus yeoncheonense sp. nov., isolated from soil of ginseng.
ジャーナル Antonie Van Leeuwenhoek
Abstract A novel bacterial strain, DCY86(T) (=KCTC 42053(T) = JCM 19890(T)) was isolated from soil of a ginseng field in Yeoncheon province (38°04'00″N 126°57'00″E), Republic of Korea using a serial dilution method. Strain DCY86(T) was observed to be Gram-stain negative, strictly aerobic, to grow optimally at 25-30 °C, at pH 7-7.5 and on tryptic soya agar medium. The cells were found to be sensitive to ceftazidine and tetracycline. Based on 16S rRNA gene sequence comparisons, strain DCY86(T) was found to be most closely related to Cupriavidus basilensis LMG 18990(T) (98.48 %), Cupriavidus numazensis LMG 26411(T) (98.34 %), Cupriavidus pinatabonesis KCTC 22125(T) (98.34 %) and Cupriavidus laharis KCTC 22126(T) (98.00 %). The G+C content was determined to be 64.23 mol %. The only isoprenoid quinone detected in strain DCY86(T) was ubiquinone Q-8. The major polar lipids were identified as diphosphatidylglycerol, phosphtidylethanolamine, phosphatidylglycerol, unidentified aminophosphoglycolipids and unidentified phospholipids. The major fatty acids were identified as C16:0 summed feature 3 (C16:1 ω7c/ω6c and/or iso-C15 : 0 2-OH) and summed feature 8 (C18:1 ω7c and/or C18:1 ω6c). These data support the affiliation of strain DCY86(T) to the genus Cupriavidus. Strain DCY86(T) was also found to be able to solubilize phosphate and produce siderophores. The results of physiological and biochemical tests enabled strain DCY86(T) to be differentiated genotypically and phenotypically from the recognized species of the genus Cupriaividus. Therefore, the novel isolate can be considered to represent a novel species, for which the name Cupriavidus yeoncheonense sp. nov. is proposed here. The type strain is DCY86(T) (=KCTC 42053(T) = JCM 19890(T)).
巻・号 107(3)
ページ 749-58
公開日 2015-3-1
DOI 10.1007/s10482-014-0369-z
PMID 25690136
MeSH Aerobiosis Anti-Bacterial Agents / pharmacology Bacterial Typing Techniques Base Composition Ceftazidime / pharmacology Cluster Analysis Culture Media / chemistry Cupriavidus / classification* Cupriavidus / genetics Cupriavidus / isolation & purification* Cupriavidus / physiology Cytosol / chemistry DNA, Bacterial / chemistry DNA, Bacterial / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics Fatty Acids / analysis Glycolipids / analysis Hydrogen-Ion Concentration Molecular Sequence Data Panax / growth & development Phospholipids / analysis Phylogeny Quinones / analysis RNA, Ribosomal, 16S / genetics Republic of Korea Sequence Analysis, DNA Soil Microbiology* Temperature Tetracycline / pharmacology
IF 2.674
引用数 13
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 19890