論文 - 詳細
| RRC ID | 40953 |
|---|---|
| 著者 | Srinivasan S, Joo ES, Lee JJ, Kim MK. |
| タイトル | Hymenobacter humi sp. nov., a bacterium isolated from soil. |
| ジャーナル | Antonie Van Leeuwenhoek |
| Abstract |
A red-pink coloured, Gram-negative, rod-shaped bacterium designated as strain DG31A(T) was isolated from soil collected in Seoul, South Korea. The isolate was found to grow optimally at 25 °C on R2A agar. The highest degrees of 16S rRNA gene sequence similarities of the strain were found with Hymenobacter arizonensis JCM 13504(T) (98.0 %), Hymenobacter glaciei VUG-A130(T) (96.1 %), Hymenobacter soli PB17(T) (95.2 %), Hymenobacter antarcticus VUG-A42aa(T) (94.7 %) and Hymenobacter chitinivorans Txc1(T) (92.8 %). The DNA G+C content of the novel strain, DG31A(T), was determined to be 60.8 mol%. Chemotaxonomic data revealed that the major fatty acids were summed feature 3 (C16:1 ω7c and/or C16:1 ω6c; 26.7 %), C16:1 ω5c (18.9 %) and anteiso-C15:0 (12.9 %); the major polar lipid was identified as phosphatidylethanolamine; the polyamine pattern was found to contain sym-homospermidine; and the major quinone was identified as MK-7. The DNA-DNA relatedness of strain DG31A(T) with respect to H. arizonensis JCM 13504(T) was 19.5 ± 2.9 % (reciprocal, 19.3 ± 0.6 %). Based on these data, strain DG31A(T) should be classified within the genus Hymenobacter as a novel species for which the name Hymenobacter humi sp. nov. is proposed, with the type strain DG31A(T) (=KCTC 32523(T) = JCM 19635(T)). |
| 巻・号 | 107(6) |
| ページ | 1411-9 |
| 公開日 | 2015-6-1 |
| DOI | 10.1007/s10482-015-0436-0 |
| PMID | 25822157 |
| MeSH | Bacterial Typing Techniques Base Composition Cluster Analysis Culture Media / chemistry Cytophagaceae / classification* Cytophagaceae / genetics Cytophagaceae / isolation & purification* Cytophagaceae / physiology Cytosol / chemistry DNA, Bacterial / chemistry DNA, Bacterial / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics Fatty Acids / analysis Microscopy, Electron, Transmission Molecular Sequence Data Nucleic Acid Hybridization Phospholipids / analysis Phylogeny Pigments, Biological / metabolism Quinones / analysis RNA, Ribosomal, 16S / genetics Republic of Korea Sequence Analysis, DNA Soil Microbiology* Temperature |
| IF | 2.674 |
| 引用数 | 11 |
| WOS 分野 | MICROBIOLOGY |
| オルトメトリクス指標 |
オルトメトリクス指標項目
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| 各媒体での言及数の合計 | 0 |
| リソース情報 | |
| 一般微生物 | JCM 13504 JCM 19635 JCM 17225 |