RRC ID 47587
著者 Huang HY, Li J, Zhao GZ, Zhu WY, Yang LL, Tang HY, Xu LH, Li WJ.
タイトル Sphingomonas endophytica sp. nov., isolated from Artemisia annua L.
ジャーナル Int J Syst Evol Microbiol
Abstract A novel bacterium (strain YIM 65583(T)) belonging to the genus Sphingomonas was isolated from surface-sterilized tissue of Artemisia annua L., which was collected from Yunnan province, south-west China. Its morphology, physiology and biochemical features were consistent with those of members of the genus Sphingomonas. Analysis of the 16S rRNA gene sequence of strain YIM 65583(T) further confirmed that it should be classified as a member of the genus Sphingomonas and was most closely related to Sphingomonas phyllosphaerae FA2(T) (99.7%) and Sphingomonas yunnanensis YIM 003(T) (98.3%). The isolate was Gram-negative and formed yellow-pigmented colonies on ISP 2 medium. It grew optimally at pH 6.0-8.0, at 20-37 °C and in the presence of 0-1% (w/v) NaCl. The major respiratory lipoquinone was ubiquinone-10; C(18:1)ω7c, anteiso-C(16:1), C(14:0)-2OH, C(17:1)ω6c, C(16:0) and C(15:0) were the major fatty acids. Major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, phosphatidylcholine and sphingoglycolipid. The G+C content of the genomic DNA was 63.3 mol%. The DNA-DNA relatedness values of the isolate YIM 65583(T) with S. phyllosphaerae FA2(T) and S. yunnanensis YIM 003(T) were 43.1% and 37.9%, respectively. Based on these features, it is concluded that the strain represents a novel species of the genus Sphingomonas, for which the name Sphingomonas endophytica sp. nov. is proposed, with YIM 65583(T) (=CCTCC AA 209035(T)=JCM 17394(T)) as the type strain.
巻・号 62(Pt 7)
ページ 1576-1580
公開日 2012-7-1
DOI 10.1099/ijs.0.031484-0
PMID 21873515
MeSH Artemisia annua / microbiology* Bacterial Typing Techniques Base Composition China Cluster Analysis DNA, Bacterial / chemistry DNA, Bacterial / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics Fatty Acids / analysis Hydrogen-Ion Concentration Molecular Sequence Data Nucleic Acid Hybridization Phospholipids / analysis Phylogeny Pigments, Biological / metabolism RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Sodium Chloride / metabolism Sphingomonas / classification* Sphingomonas / genetics Sphingomonas / isolation & purification* Sphingomonas / physiology Temperature Ubiquinone / analysis
IF 2.415
引用数 16
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM 17394