| RRC ID |
48490
|
| 著者 |
Kwon SK, Lee HG, Kwak MJ, Kim JF.
|
| タイトル |
Genome sequence of the marine flavobacterium Croceitalea dokdonensis DOKDO 023 that contains proton- and sodium-pumping rhodopsins.
|
| ジャーナル |
Mar Genomics
|
| Abstract |
Bacteroidetes are considered as efficient degraders of the high-molecular-weight particulate organic matter that is present in the marine environment. Here, we report the first genome sequence of the genus Croceitalea that belongs to Flavobacteriia. Gratifying the reputation, the genome of Croceitalea dokdonensis DOKDO 023 encodes many hydrolytic enzymes for utilizing biopolymers, mainly polysaccharides and proteins. The genome also harbors two genes for microbial rhodopsins, proteorhodopsin and a recently discovered sodium pump. This research provides a genetic basis for better understanding of Croceitalea, as well as insights into the strategies adapted by a rhodopsin-containing photoheterotroph to thrive in the marine environment.
|
| 巻・号 |
26
|
| ページ |
1-3
|
| 公開日 |
2016-4-1
|
| DOI |
10.1016/j.margen.2015.11.011
|
| PII |
S1874-7787(15)30053-2
|
| PMID |
26631417
|
| MeSH |
Aquatic Organisms
Flavobacteriaceae / genetics*
Gene Expression Regulation, Bacterial / physiology*
Genome, Bacterial / genetics*
Phylogeny
Proton Pumps / genetics
Proton Pumps / metabolism
Rhodopsins, Microbial / genetics
Rhodopsins, Microbial / metabolism*
Sodium-Potassium-Exchanging ATPase / genetics
Sodium-Potassium-Exchanging ATPase / metabolism
|
| IF |
1.672
|
| 引用数 |
3
|
|
WOS 分野
|
MARINE & FRESHWATER BIOLOGY
GENETICS & HEREDITY
|
| リソース情報 |
| 一般微生物 |
JCM 13826 |
