RRC ID 5162
著者 Uchiyama H, Hashidoko Y, Kuriyama Y, Tahara S.
タイトル Identification of the 4-hydroxycinnamate decarboxylase (PAD) gene of Klebsiella oxytoca.
ジャーナル Biosci Biotechnol Biochem
Abstract A 7.1-kbp DNA fragment isolated from a wild strain of Klebsiella oxytoca was sequenced, leading to the identification of 10 open-reading frames (ORFs), including a 504-bp Pad gene. The Pad gene of the Gram-negative bacterium was subsequently expressed in Escherichia coli as a chimeric Pad. The deduced amino acid (AA) sequence of the Pad gene from wild-type K. oxytoca showed approximately 50% homology to those of other bacterial PADs from Gram-positive bacilli plus a coccus. These data and a genomic library search of some gamma-proteobacteria, including E. coli and Vibrio sp., indicated that PAD of K. oxytoca is a member of the bacterial PAD family characteristic of Gram-negative bacteria. Using Pad-specific PCR primers designed from the Gram-negative bacterial Pad of K. oxytoca, Pad genes of two further strains of K. oxytoca, another wild isolate and JCM 1665 and two PAD-positive Enterobacter spp. were successfully amplified for specific Pad detection.
巻・号 72(1)
ページ 116-23
公開日 2008-1-1
DOI 10.1271/bbb.70496
PII JST.JSTAGE/bbb/70496
PMID 18175898
MeSH Amino Acid Sequence Bacterial Proteins / genetics Carboxy-Lyases / genetics* Conserved Sequence DNA Primers Gram-Negative Bacteria / enzymology Gram-Negative Bacteria / genetics Gram-Positive Bacteria / enzymology Gram-Positive Bacteria / genetics Klebsiella oxytoca / enzymology* Klebsiella oxytoca / genetics* Molecular Sequence Data Open Reading Frames Polymerase Chain Reaction Sequence Alignment Sequence Homology, Amino Acid Species Specificity
IF 1.516
引用数 2
WOS 分野 FOOD SCIENCE & TECHNOLOGY CHEMISTRY, APPLIED BIOTECHNOLOGY & APPLIED MICROBIOLOGY BIOCHEMISTRY & MOLECULAR BIOLOGY
リソース情報
一般微生物 JCM1665