RRC ID 544
Author Prasad MD, Muthulakshmi M, Arunkumar KP, Madhu M, Sreenu VB, Pavithra V, Bose B, Nagarajaram HA, Mita K, Shimada T, Nagaraju J.
Title SilkSatDb: a microsatellite database of the silkworm, Bombyx mori.
Journal Nucleic Acids Res.
Abstract The SilkSatDb (silkmoth microsatellite database) (http://www.cdfd.org.in/silksatdb) is a relational database of microsatellites extracted from the available expressed sequence tags and whole genome shotgun sequences of the silkmoth, Bombyx mori. The database has been rendered with a simple and robust web-based search facility, developed using PHP. The SilkSatDb also stores information on primers developed and validated in the laboratory. Users can retrieve information on the microsatellite and the protocols used, along with informative figures and polymorphism status of those microsatellites. In addition, the interface is coupled with Autoprimer, a primer-designing program, using which users can design primers for the loci of interest.
Volume 33(Database issue)
Pages D403-6
Published 2005-1-1
DOI 10.1093/nar/gki099
PII 33/suppl_1/D403
PMID 15608226
PMC PMC540053
MeSH Animals Bombyx / genetics* Databases, Nucleic Acid* Internet Microsatellite Repeats* Sequence Analysis, DNA User-Computer Interface
IF 11.147
Times Cited 19
WOS Category BIOCHEMISTRY & MOLECULAR BIOLOGY
Resource
Silkworms Silkbase