Reference - Detail
RRC ID | 5485 |
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Author | Yoo SH, Weon HY, Anandham R, Kim BY, Hong SB, Jeon YA, Koo BS, Kwon SW. |
Title | Dokdonella soli sp. nov., a gammaproteobacterium isolated from soil. |
Journal | Int J Syst Evol Microbiol |
Abstract |
An aerobic, Gram-negative, yellow-coloured, rod-shaped bacterial strain, designated KIS28-6T, was isolated from soil from Ulleung, an island located in the East Sea of Korea. A phylogenetic analysis revealed that strain KIS28-6T was a member of the genus Dokdonella, having 16S rRNA gene sequence similarities of 98.1 and 96.9% with respect to Dokdonella fugitiva CIP 108692T and Dokdonella koreensis DSM 17203T, respectively. Strain KIS28-6T showed DNA-DNA hybridization values of 38 and 32% with respect to D. fugitiva CIP 108692T and D. koreensis DSM 17203T, respectively. The major fatty acids (>10%) were iso-C17:1omega9c (35.7%), iso-C17:0 (26.9%) and iso-C15:0 (11.7%), the major respiratory quinone was Q-8 and the DNA G+C content was 73.0 mol%. On the basis of the results obtained in this polyphasic taxonomic analysis, strain KIS28-6T represents a novel species of the genus Dokdonella, for which the name Dokdonella soli sp. nov. is proposed. The type strain is KIS28-6T (=KACC 12741T =JCM 15421T). |
Volume | 59(Pt 8) |
Pages | 1965-8 |
Published | 2009-8-1 |
DOI | 10.1099/ijs.0.005348-0 |
PII | ijs.0.005348-0 |
PMID | 19567557 |
MeSH | Aerobiosis Bacterial Typing Techniques Base Composition Cluster Analysis DNA, Bacterial / chemistry DNA, Bacterial / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics Fatty Acids / analysis Korea Molecular Sequence Data Nucleic Acid Hybridization Phylogeny Pigments, Biological / biosynthesis Quinones / analysis RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Soil Microbiology* Xanthomonadaceae / chemistry Xanthomonadaceae / classification* Xanthomonadaceae / genetics Xanthomonadaceae / isolation & purification* |
IF | 2.415 |
Times Cited | 13 |
WOS Category | MICROBIOLOGY |
Resource | |
General Microbes | JCM15421 |