Reference - Detail
| RRC ID | 5503 |
|---|---|
| Author | Xu XW, Wu YH, Wang CS, Wang XG, Oren A, Wu M. |
| Title | Croceicoccus marinus gen. nov., sp. nov., a yellow-pigmented bacterium from deep-sea sediment, and emended description of the family Erythrobacteraceae. |
| Journal | Int J Syst Evol Microbiol |
| Abstract |
A Gram-negative, aerobic, neutrophilic, coccoid bacterium, strain E4A9T, was isolated from a deep-sea sediment sample collected from the East Pacific polymetallic nodule region. 16S rRNA gene sequence analysis showed that the isolate was related to the type strain of Altererythrobacter epoxidivorans (96.0% sequence similarity). Lower 16S rRNA gene sequence similarities were observed with other members of the genera Altererythrobacter (94.7%), Erythrobacter (94.0-95.4%), Erythromicrobium (94.8%) and Porphyrobacter (94.6-95.1%) of the family Erythrobacteraceae. Phylogenetic analysis including all described species of the family Erythrobacteraceae and several members of the family Sphingomonadaceae revealed that the isolate formed a distinct phylogenetic lineage with the family Erythrobacteraceae. Chemotaxonomic analysis revealed ubiquinone-10 as the predominant respiratory quinone, anteiso-C15:0, iso-C14:0 and iso-C15:0 as major fatty acids, and phosphatidylglycerol as the major polar lipid. The DNA G+C content was 71.5 mol%. The isolate contained carotenoids, but no bacteriochlorophyll a. On the basis of phenotypic and genotypic data presented in this study, strain E4A9T represents a novel species in a new genus in the family Erythrobacteraceae for which the name Croceicoccus marinus gen. nov., sp. nov. is proposed; the type strain is E4A9T (=CGMCC 1.6776T=JCM 14846T). |
| Volume | 59(Pt 9) |
| Pages | 2247-53 |
| Published | 2009-9-1 |
| DOI | 10.1099/ijs.0.004267-0 |
| PII | ijs.0.004267-0 |
| PMID | 19620383 |
| MeSH | Aerobiosis Alphaproteobacteria / classification* Alphaproteobacteria / genetics Alphaproteobacteria / isolation & purification* Alphaproteobacteria / physiology Bacterial Typing Techniques Bacteriochlorophyll A / analysis Base Composition Carotenoids / analysis Cluster Analysis DNA, Bacterial / chemistry DNA, Bacterial / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics Fatty Acids / analysis Geologic Sediments / microbiology* Microscopy, Electron, Scanning Microscopy, Electron, Transmission Molecular Sequence Data Phylogeny Pigments, Biological / biosynthesis* Quinones / analysis RNA, Ribosomal, 16S / genetics Seawater Sequence Analysis, DNA |
| IF | 2.415 |
| Times Cited | 27 |
| WOS Category | MICROBIOLOGY |
| Altmetric score |
オルトメトリクス指標項目
|
| The most frequently cited source | Patent(IFI CLAIMS) |
| Total number of mentions | 10 |
| Altmetric score changes over past 6months | 0.0 |
| Resource | |
| General Microbes | JCM14846 |