RRC ID 5538
著者 Roh SW, Nam YD, Chang HW, Kim KH, Kim MS, Shin KS, Yoon JH, Oh HM, Bae JW.
タイトル Paracoccus aestuarii sp. nov., isolated from tidal flat sediment.
ジャーナル Int J Syst Evol Microbiol
Abstract A Gram-negative micro-organism, designated strain B7(T), was isolated from tidal flat sediment and subjected to a polyphasic taxonomic study involving morphological, physiological, biochemical and 16S rRNA gene sequence analyses. A phylogenetic analysis based on the 16S rRNA gene sequence indicated that strain B7(T) belonged to the genus Paracoccus and was closely related phylogenetically to Paracoccus marcusii MH1(T) (97.5 % sequence similarity), Paracoccus marinus KKL-A5(T) (97.5 %), Paracoccus haeundaensis BC74171(T) (97.3 %), Paracoccus carotinifaciens E-396(T) (97.3 %), Paracoccus homiensis DD-R11(T) (97.2 %), Paracoccus seriniphilus MBT-A4(T) (96.9 %) and other type strains of the genus Paracoccus (95.2-96.7 %). The G+C content of the genomic DNA and the major isoprenoid quinone of the type strain were 62.0 mol% and ubiquinone-10, respectively. The major fatty acid components were C(18 : 1)omega7c (68.9 %) and C(18 : 0) (18.1 %); this profile, with C(18 : 1)omega7c as the predominant fatty acid, was characteristic of members of the genus Paracoccus. The 16S rRNA gene sequence analysis, DNA-DNA hybridization studies and physiological and biochemical tests identified genotypic and phenotypic differences between strain B7(T) and recognized Paracoccus species. On the basis of these data, therefore, strain B7(T) represents a novel species of the genus Paracoccus, for which the name Paracoccus aestuarii sp. nov. is proposed. The type strain is B7(T) (=KCTC 22049(T)=DSM 19484(T)=JCM 15119(T)).
巻・号 59(Pt 4)
ページ 790-4
公開日 2009-4-1
DOI 10.1099/ijs.0.65759-0
PII 59/4/790
PMID 19329608
MeSH Bacterial Typing Techniques Base Composition Cluster Analysis DNA, Bacterial / chemistry DNA, Bacterial / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics Fatty Acids / analysis Geologic Sediments / microbiology* Molecular Sequence Data Nucleic Acid Hybridization Paracoccus / classification* Paracoccus / genetics Paracoccus / isolation & purification* Paracoccus / physiology Phylogeny Quinones / analysis RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Sequence Homology, Nucleic Acid
IF 2.415
引用数 30
WOS 分野 MICROBIOLOGY
リソース情報
一般微生物 JCM15119