RRC ID 57471
Author Capinha C.
Title Predicting the timing of ecological phenomena using dates of species occurrence records: a methodological approach and test case with mushrooms.
Journal Int J Biometeorol
Abstract Spatiotemporal predictions of ecological phenomena are highly useful and significant in scientific and socio-economic applications. However, the inadequate availability of ecological time-series data often impedes the development of statistical predictions. On the other hand, considerable amounts of temporally discrete biological records (commonly known as 'species occurrence records') are being stored in public databases, and often include the location and date of the observation. In this paper, we describe an approach to develop spatiotemporal predictions based on the dates and locations found in species occurrence records. The approach is based on 'time-series classification', a field of machine learning, and consists of applying a machine-learning algorithm to classify between time series representing the environmental variation that precedes the occurrence records and time series representing the full range of environmental variation that is available in the location of the records. We exemplify the application of the approach for predicting the timing of emergence of fruiting bodies of two mushroom species (Boletus edulis and Macrolepiota procera) in Europe, from 2009 to 2015. Predictions made from this approach were superior to those provided by a 'null' model representing the average seasonality of the species. Given the increased availability and information contained in species occurrence records, particularly those supplemented with photographs, the range of environmental events that could be possible to predict using this approach is vast.
Volume 63(8)
Pages 1015-1024
Published 2019-4-18
DOI 10.1007/s00484-019-01714-0
PII 10.1007/s00484-019-01714-0
PMID 31001681
MeSH Agaricales* Ecology* Europe
IF 2.377
Times Cited 1
Resource
GBIF Genebank, National Institute of Agrobiological Sciences Biological Resource Center, Department of Biotechnology, National Institute of Technology and Evaluation Fungal Specimens of National Museum of Nature and Science (TNS) Fungi specimen database of Kanagawa Prefectural Museum of Natural History Ibaraki Nature Museum, Fungi collection Gunma Museum of Natural History, Fungi Specimen Fungal Collection of Natural History Museum and Institute, Chiba Fungi specimens of Saitama Museum of Natural History Fungi specimens of Kawasaki Municipal Science Museum