RRC ID 63165
著者 Ohashi R, Umezu H, Sato A, Abé T, Kondo S, Daigo K, Sato S, Hara N, Miyashita A, Ikeuchi T, Motoyama T, Kishi M, Nagaoka T, Horiuchi K, Shiga A, Okuda S, Sekiya T, Ohtsubo A, Ichikawa K, Kagamu H, Kikuchi T, Watanabe S, Tanuma JI, Schraml P, Hamakubo T, Tsuchida M, Ajioka Y.
タイトル Frequent Germline and Somatic Single Nucleotide Variants in the Promoter Region of the Ribosomal RNA Gene in Japanese Lung Adenocarcinoma Patients.
ジャーナル Cells
Abstract Ribosomal RNA (rRNA), the most abundant non-coding RNA species, is a major component of the ribosome. Impaired ribosome biogenesis causes the dysfunction of protein synthesis and diseases called "ribosomopathies," including genetic disorders with cancer risk. However, the potential role of rRNA gene (rDNA) alterations in cancer is unknown. We investigated germline and somatic single-nucleotide variants (SNVs) in the rDNA promoter region (positions -248 to +100, relative to the transcription start site) in 82 lung adenocarcinomas (LUAC). Twenty-nine tumors (35.4%) carried germline SNVs, and eight tumors (9.8%) harbored somatic SNVs. Interestingly, the presence of germline SNVs between positions +1 and +100 (n = 12; 14.6%) was associated with significantly shorter recurrence-free survival (RFS) and overall survival (OS) by univariate analysis (p < 0.05, respectively), and was an independent prognostic factor for RFS and OS by multivariate analysis. LUAC cell line PC9, carrying rDNA promoter SNV at position +49, showed significantly higher ribosome biogenesis than H1650 cells without SNV. Upon nucleolar stress induced by actinomycin D, PC9 retained significantly higher ribosome biogenesis than H1650. These results highlight the possible functional role of SNVs at specific sites of the rDNA promoter region in ribosome biogenesis, the progression of LUAC, and their potential prognostic value.
巻・号 9(11)
公開日 2020-11-3
DOI 10.3390/cells9112409
PII cells9112409
PMID 33153169
PMC PMC7692307
MeSH Adenocarcinoma of Lung / genetics* Aged Asian People / genetics* Base Sequence Cell Line, Tumor Dactinomycin / pharmacology Databases, Genetic Female Genetic Loci Germ-Line Mutation / genetics* Humans Lung Neoplasms / genetics* Male Middle Aged Multivariate Analysis Neoplasm Recurrence, Local / pathology Polymorphism, Single Nucleotide / genetics* Promoter Regions, Genetic* Proportional Hazards Models RNA, Ribosomal / genetics* Reproducibility of Results Survival Analysis
IF 4.366
リソース情報
ヒト・動物細胞 Jurkat