RRC ID 64401
Author Droujinine IA, Meyer AS, Wang D, Udeshi ND, Hu Y, Rocco D, McMahon JA, Yang R, Guo J, Mu L, Carey DK, Svinkina T, Zeng R, Branon T, Tabatabai A, Bosch JA, Asara JM, Ting AY, Carr SA, McMahon AP, Perrimon N.
Title Proteomics of protein trafficking by in vivo tissue-specific labeling.
Journal Nat Commun
Abstract Conventional approaches to identify secreted factors that regulate homeostasis are limited in their abilities to identify the tissues/cells of origin and destination. We established a platform to identify secreted protein trafficking between organs using an engineered biotin ligase (BirA*G3) that biotinylates, promiscuously, proteins in a subcellular compartment of one tissue. Subsequently, biotinylated proteins are affinity-enriched and identified from distal organs using quantitative mass spectrometry. Applying this approach in Drosophila, we identify 51 muscle-secreted proteins from heads and 269 fat body-secreted proteins from legs/muscles, including CG2145 (human ortholog ENDOU) that binds directly to muscles and promotes activity. In addition, in mice, we identify 291 serum proteins secreted from conditional BirA*G3 embryo stem cell-derived teratomas, including low-abundance proteins with hormonal properties. Our findings indicate that the communication network of secreted proteins is vast. This approach has broad potential across different model systems to identify cell-specific secretomes and mediators of interorgan communication in health or disease.
Volume 12(1)
Pages 2382
Published 2021-4-22
DOI 10.1038/s41467-021-22599-x
PII 10.1038/s41467-021-22599-x
PMID 33888706
PMC PMC8062696
MeSH Animals Animals, Genetically Modified Biotin / metabolism Biotinylation Carbon-Nitrogen Ligases / genetics Carbon-Nitrogen Ligases / metabolism* Cell Line Disease Models, Animal Drosophila Embryonic Stem Cells Escherichia coli Proteins / genetics Escherichia coli Proteins / metabolism* Female Humans Male Mice Protein Engineering Protein Transport Proteomics / methods* Repressor Proteins / genetics Repressor Proteins / metabolism* Staining and Labeling / methods* Tandem Mass Spectrometry / methods Teratoma / diagnosis Teratoma / pathology
IF 12.121
Resource
Drosophila 2155R-1 31326R-2 31326R-1 4332R-3