RRC ID 65804
著者 Lin M, Simons AL, Harrigan RJ, Curd EE, Schneider FD, Ruiz-Ramos DV, Gold Z, Osborne MG, Shirazi S, Schweizer TM, Moore TN, Fox EA, Turba R, Garcia-Vedrenne AE, Helman SK, Rutledge K, Mejia MP, Marwayana O, Munguia Ramos MN, Wetzer R, Pentcheff ND, McTavish EJ, Dawson MN, Shapiro B, Wayne RK, Meyer RS.
タイトル Landscape analyses using eDNA metabarcoding and Earth observation predict community biodiversity in California.
ジャーナル Ecol Appl
Abstract Ecosystems globally are under threat from ongoing anthropogenic environmental change. Effective conservation management requires more thorough biodiversity surveys that can reveal system-level patterns and that can be applied rapidly across space and time. Using modern ecological models and community science, we integrate environmental DNA and Earth observations to produce a time snapshot of regional biodiversity patterns and provide multi-scalar community-level characterization. We collected 278 samples in Spring 2017 from coastal, shrub and lowland forest sites in California, a complex ecosystem and biodiversity hotspot. We recovered 16,118 taxonomic entries from eDNA analyses and compiled associated traditional observations and environmental data to assess how well they predicted alpha, beta, and zeta diversity. We found that local habitat classification was diagnostic of community composition and distinct communities and organisms in different kingdoms are predicted by different environmental variables. Nonetheless, gradient forest models of 915 families recovered by eDNA analysis and using Bioclim variables, Sentinel-2 satellite data, human impact, and topographical features as predictors, explained 35% of the variance in community turnover. Elevation, sand percentage, and photosynthetic activities (NDVI32) were the top predictors. In addition to this signal of environmental filtering, we found a positive relationship between environmentally predicted families and their numbers of biotic interactions, suggesting environmental change could have a disproportionate effect on community networks. Together, these analyses show that coupling eDNA with environmental predictors including remote sensing data, has capacity to test proposed Essential Biodiversity Variables and create new landscape biodiversity baselines that span the tree of life.
巻・号 31(6)
ページ e02379
公開日 2021-9-1
DOI 10.1002/eap.2379
PMID 34013632
PMC PMC9297316
MeSH Biodiversity California DNA Barcoding, Taxonomic DNA, Environmental* Ecosystem* Environmental Monitoring
IF 4.248
リソース情報
GBIF Mollusca collection of National Museum of Nature and Science Asia-Pacific Dataset Crustacean collection of the National Museum of Nature and Science Annelida collection of National Museum of Nature and Science Entomological Specimens of Museum of Nature and Human Activities, Hyogo Pref., Japan Akita Prefectural Museum, Hiroki Watanabe Collection Insect Collection of Yokosuka City Museum AIS Wildtype Populations of Arabidopsis Plankton&BenthosResearch Mollusk Collection of Yokosuka City Museum Fish Collection of Yokosuka City Museum Fish collection of National Museum of Nature and Science Fish Collection of Natural History Museum and Institute, Chiba Fungal Specimens of National Museum of Nature and Science (TNS)