RRC ID 66706
Author Pu N, Li W, Li ZJ.
Title Complete genome sequence of Neptunomonas concharum JCM17730T: An acetate assimilating bacterium isolated from a dead ark clam.
Journal Mar Genomics
Abstract The marine bacterium Neptunomonas concharum was firstly characterized in 2012. It preferred to utilize acetate as the carbon source to accumulate poly-3-hydroxybutyrate (PHB) as intracellular carbon and energy storage. Here we report the genomic characteristics of N. concharum JCM17730T. The complete genome sequence of N. concharum JCM17730T consists of 3,561,992 bp in one contig, without plasmid. Analysis of coding sequences revealed the presence of genomic features involved in acetate assimilation and PHB metabolism. The genome of N. concharum JCM17730T contains three genes encoding acetyl-CoA synthetase and two genes encoding isocitrate lyase. Three polyhydroxyalkanoate synthases and one polyhydroxyalkanoate depolymerase are scattered throughout the genomic DNA. The genome features provide interesting insights into the acetate and PHB metabolism of N. concharum JCM17730T and would facilitate further research on the genetic engineering of marine bacteria for efficient PHB production.
Volume 53
Pages 100754
Published 2020-10-1
DOI 10.1016/j.margen.2020.100754
PII S1874-7787(20)30015-5
PMID 32883436
MeSH Acetates / metabolism Animals Arcidae / microbiology* Genome, Bacterial* Oceanospirillaceae / genetics* Republic of Korea Whole Genome Sequencing
Resource
General Microbes JCM17730