RRC ID 66730
著者 Zhang B, Yang R, Zhang G, Liu Y, Zhang D, Zhang W, Chen T, Liu G.
タイトル Characteristics of Planococcus antioxidans sp. nov., an antioxidant-producing strain isolated from the desert soil in the Qinghai-Tibetan Plateau.
ジャーナル Microbiologyopen
Abstract Strain Y74T was an isolate from the sandy soil in the town of Huatugou, Qinghai-Tibet Plateau, China. An analysis of this strain's phenotypic, chemotaxonomic, and genomic characteristics established the relationship of the isolate with the genus Planococcus. Strain Y74T was able to grow between 4 and 42°C (with an optimum temperature of 28°C) at pH values of 6-8.5 and in 0%-7% (w/v) NaCl. The dominant quinones were MK-8 and MK-7. The polar lipids were diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylglycerol, and an unknown phospholipid. The majority of the fatty acid content was anteiso-C15:0 (28.8%) followed by C16:1 ω7c alcohol (20.9%) and iso-C14:0 (13.4%). The 16S rRNA gene sequence similarity analysis demonstrated a stable branch formed by strain Y74T and Planococcus halotolerans SCU63T (99.66%). The digital DNA-DNA hybridization between these two strains was 57.2%. The G + C content in the DNA of Y74T was 44.5 mol%. In addition, the morphological, physiological, and chemotaxonomic pattern clearly differentiated the isolates from their known relatives. In conclusion, the strain Y74T (=JCM 32826T  = CICC24461T ) represents a novel member of the genus Planococcus, for which the name Planococcus antioxidans sp. nov. is proposed. Strain Y74T was found to have potent antioxidant activity via its hydrogen peroxide tolerance and its 1,1-diphenyl-2-picrylhydrazyl (DPPH) radical-scavenging activity. The DPPH radical-scavenging activity was determined to be 40.2 ± 0.7%. The genomic analysis indicated that six peroxidases genes, one superoxide dismutase gene, and one dprA (DNA-protecting protein) are present in the genome of Y74T .
巻・号 9(6)
ページ 1183-1196
公開日 2020-6-1
DOI 10.1002/mbo3.1028
PMID 32162498
PMC PMC7294307
MeSH Antioxidants / metabolism* Bacterial Typing Techniques Base Composition / genetics DNA, Bacterial / genetics Fatty Acids / analysis Genome, Bacterial / genetics Planococcus Bacteria / classification* Planococcus Bacteria / genetics Planococcus Bacteria / isolation & purification Planococcus Bacteria / metabolism* Sequence Analysis, DNA Soil Microbiology Tibet Whole Genome Sequencing
リソース情報
一般微生物 JCM32826