論文 - 詳細
| RRC ID | 7066 |
|---|---|
| 著者 | Srinivasan S, Kim MK, Sathiyaraj G, Veena V, Mahalakshmi M, Kalaiselvi S, Kim YJ, Yang DC. |
| タイトル | Sphingopyxis panaciterrulae sp. nov., isolated from soil of a ginseng field. |
| ジャーナル | Int J Syst Evol Microbiol |
| Abstract |
A Gram-negative, rod-shaped, motile bacterium was isolated from the soil of a ginseng field in Daejeon, South Korea, and characterized in order to determine its taxonomic position. Phylogenetic analysis based on 16S rRNA gene sequence analysis revealed that strain DCY34(T) belonged to the family Sphingomonadaceae, and the highest degree of sequence similarity was found with Sphingopyxis witflariensis W-50(T) (97.1 %), Sphingopyxis ginsengisoli Gsoil 250(T) (97.0 %), Sphingopyxis chilensis S37(T) (96.9 %), Sphingopyxis macrogoltabida IFO 15033(T) (96.8 %), Sphingopyxis alaskensis RB2256(T) (96.7 %) and Sphingopyxis taejonensis JSS54(T) (96.7 %). Chemotaxonomic data revealed that strain DCY34(T) possessed ubiquinone Q-10 as the predominant respiratory lipoquinone, which is common to members of the genus Sphingopyxis. The predominant fatty acids were C₁₈:₁ω7c (27.5 %), summed feature 4 (C₁₆:₁ω7c and/or C₁₅ :₀ iso 2-OH; 18.6 %), C₁₆:₀ (15.6 %) and summed feature 8 (C₁₉:₁ω6c and/or unknown 18.864; 15.4 %). The major polar lipids were phosphatidylethanolamine, diphosphatidylglycerol, phosphatidylglycerol, phosphatidylcholine, sphingoglycolipid and an unknown polar lipid. The results of physiological and biochemical tests clearly demonstrated that strain DCY34(T) represented a separate species and supported its affiliation to the genus Sphingopyxis. Based on these data, the new isolate represents a novel species, for which the name Sphingopyxis panaciterrulae sp. nov. is proposed. The type strain is DCY34(T) (=KCTC 22112(T)=JCM 14844(T)). |
| 巻・号 | 60(Pt 10) |
| ページ | 2358-2363 |
| 公開日 | 2010-10-1 |
| DOI | 10.1099/ijs.0.019414-0 |
| PMID | 19933588 |
| MeSH | Bacterial Typing Techniques Cluster Analysis DNA, Bacterial / chemistry DNA, Bacterial / genetics DNA, Ribosomal / chemistry DNA, Ribosomal / genetics Fatty Acids / analysis Korea Locomotion Molecular Sequence Data Panax / microbiology* Phospholipids / analysis Phylogeny Quinones / analysis RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA Soil Microbiology* Sphingomonadaceae / chemistry Sphingomonadaceae / classification* Sphingomonadaceae / genetics Sphingomonadaceae / isolation & purification* |
| IF | 2.415 |
| 引用数 | 10 |
| WOS 分野 | MICROBIOLOGY |
| オルトメトリクス指標 |
オルトメトリクス指標項目
|
| 最多言及媒体 | Wikipedia |
| 各媒体での言及数の合計 | 1 |
| 過去6か月間でのオルトメトリクス指標の変動値 | 0.0 |
| リソース情報 | |
| 一般微生物 | JCM 14844 |